RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 NEXMIFQ5QGS0 1516 aa17.05■□□□□ 0.32
PRPF40B-209ENST00000548825 ZBTB7BO15156 539 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-209ENST00000548825 CT47B1P0C2W7 299 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-209ENST00000548825 IQSEC2Q5JU85 1478 aa17.04■□□□□ 0.32
PRPF40B-209ENST00000548825 NUCB1Q02818 461 aa17.04■□□□□ 0.32
PRPF40B-209ENST00000548825 FOXD4L6Q3SYB3 417 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-209ENST00000548825 FOXD4L3Q6VB84 417 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-209ENST00000548825 SMC5Q8IY18 1101 aa17.04■□□□□ 0.32
PRPF40B-209ENST00000548825 TSPYL4Q9UJ04 414 aa17.04■□□□□ 0.32
PRPF40B-209ENST00000548825 SIGLEC1Q9BZZ2 1709 aa17.03■□□□□ 0.32
PRPF40B-209ENST00000548825 LMTK2Q8IWU2 1503 aa17.03■□□□□ 0.32
PRPF40B-209ENST00000548825 NLRP6P59044 892 aa17.03■□□□□ 0.32
PRPF40B-209ENST00000548825 KIAA1210Q9ULL0 1709 aa17.02■□□□□ 0.32
PRPF40B-209ENST00000548825 HDGFP51858 240 aaKnown RBP17.02■□□□□ 0.32
PRPF40B-209ENST00000548825 PUS7Q96PZ0 661 aaKnown RBP17.02■□□□□ 0.32
PRPF40B-209ENST00000548825 PPLO60437 1756 aa17.02■□□□□ 0.32
PRPF40B-209ENST00000548825 TBC1D9Q6ZT07 1266 aa17.02■□□□□ 0.31
PRPF40B-209ENST00000548825 SIRT2Q8IXJ6 389 aa17.02■□□□□ 0.31
PRPF40B-209ENST00000548825 CFAP44Q96MT7 982 aa17.02■□□□□ 0.31
PRPF40B-209ENST00000548825 PRR36Q9H6K5 1346 aa17.02■□□□□ 0.31
PRPF40B-209ENST00000548825 LMOD3Q0VAK6 560 aa17.01■□□□□ 0.31
PRPF40B-209ENST00000548825 AAMPQ13685 434 aa17.01■□□□□ 0.31
PRPF40B-209ENST00000548825 MEIS3Q99687 375 aa17.01■□□□□ 0.31
PRPF40B-209ENST00000548825 EIF2S2P20042 333 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-209ENST00000548825 ALDH1L2Q3SY69 923 aa17.01■□□□□ 0.31
PRPF40B-209ENST00000548825 IFT57Q9NWB7 429 aa17.01■□□□□ 0.31
PRPF40B-209ENST00000548825 SETBP1Q9Y6X0 1596 aa17.01■□□□□ 0.31
PRPF40B-209ENST00000548825 PTPRMP28827 1452 aa17.01■□□□□ 0.31
PRPF40B-209ENST00000548825 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-209ENST00000548825 LTKP29376 864 aa17■□□□□ 0.31
PRPF40B-209ENST00000548825 API5Q9BZZ5 524 aaKnown RBP17■□□□□ 0.31
PRPF40B-209ENST00000548825 EXOC6BQ9Y2D4 811 aa17■□□□□ 0.31
PRPF40B-209ENST00000548825 DIP2CQ9Y2E4 1556 aa17■□□□□ 0.31
PRPF40B-209ENST00000548825 CD2BP2O95400 341 aaKnown RBP17■□□□□ 0.31
PRPF40B-209ENST00000548825 XPCQ01831 940 aaPredicted RBP17■□□□□ 0.31
PRPF40B-209ENST00000548825 CHMP5Q9NZZ3 219 aa17■□□□□ 0.31
PRPF40B-209ENST00000548825 NEO1Q92859 1461 aa17■□□□□ 0.31
PRPF40B-209ENST00000548825 SHPRHQ149N8 1683 aa17■□□□□ 0.31
PRPF40B-209ENST00000548825 PANK2Q9BZ23 570 aa16.99■□□□□ 0.31
PRPF40B-209ENST00000548825 PIK3C2BO00750 1634 aa16.99■□□□□ 0.31
PRPF40B-209ENST00000548825 MCM4P33991 863 aa16.99■□□□□ 0.31
PRPF40B-209ENST00000548825 FKBP5Q13451 457 aaPredicted RBP16.99■□□□□ 0.31
PRPF40B-209ENST00000548825 G2E3Q7L622 706 aa16.99■□□□□ 0.31
PRPF40B-209ENST00000548825 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.99■□□□□ 0.31
PRPF40B-209ENST00000548825 IL16Q14005 1332 aa16.99■□□□□ 0.31
PRPF40B-209ENST00000548825 ZMYM3Q14202 1370 aa16.99■□□□□ 0.31
PRPF40B-209ENST00000548825 TRAK2O60296 914 aa16.98■□□□□ 0.31
PRPF40B-209ENST00000548825 EID1Q9Y6B2 187 aa16.98■□□□□ 0.31
PRPF40B-209ENST00000548825 AMOTL2Q9Y2J4 779 aa16.98■□□□□ 0.31
PRPF40B-209ENST00000548825 CD163L1Q9NR16 1453 aa16.97■□□□□ 0.31
PRPF40B-209ENST00000548825 TTC21BQ7Z4L5 1316 aa16.97■□□□□ 0.31
PRPF40B-209ENST00000548825 MYO5BQ9ULV0 1848 aa16.97■□□□□ 0.31
PRPF40B-209ENST00000548825 GOLGA6L3A6NEY3 463 aa16.97■□□□□ 0.31
PRPF40B-209ENST00000548825 TRIM6-TRIM34B2RNG4 842 aa16.97■□□□□ 0.31
PRPF40B-209ENST00000548825 RILPL2Q969X0 211 aa16.97■□□□□ 0.31
PRPF40B-209ENST00000548825 ANTXR1Q9H6X2 564 aa16.96■□□□□ 0.31
PRPF40B-209ENST00000548825 GCC1Q96CN9 775 aa16.95■□□□□ 0.3
PRPF40B-209ENST00000548825 ALKQ9UM73 1620 aa16.95■□□□□ 0.3
PRPF40B-209ENST00000548825 ZC3H13Q5T200 1668 aaKnown RBP16.95■□□□□ 0.3
PRPF40B-209ENST00000548825 ARHGEF28Q8N1W1 1705 aaKnown RBP16.95■□□□□ 0.3
PRPF40B-209ENST00000548825 MAP4K4O95819 1239 aaPredicted RBP16.95■□□□□ 0.3
PRPF40B-209ENST00000548825 MTHFSDQ2M296 383 aaKnown RBP16.95■□□□□ 0.3
PRPF40B-209ENST00000548825 ABTB2Q8N961 1025 aa16.95■□□□□ 0.3
PRPF40B-209ENST00000548825 STK31Q9BXU1 1019 aa16.95■□□□□ 0.3
PRPF40B-209ENST00000548825 DTNBO60941 627 aa16.94■□□□□ 0.3
PRPF40B-209ENST00000548825 IFT172Q9UG01 1749 aa16.94■□□□□ 0.3
PRPF40B-209ENST00000548825 ANXA1P04083 346 aa16.94■□□□□ 0.3
PRPF40B-209ENST00000548825 LRRC7Q96NW7 1537 aa16.93■□□□□ 0.3
PRPF40B-209ENST00000548825 ZNF692Q9BU19 519 aaPredicted RBP16.93■□□□□ 0.3
PRPF40B-209ENST00000548825 CHMP4BQ9H444 224 aaKnown RBP16.93■□□□□ 0.3
PRPF40B-209ENST00000548825 ROBO2Q9HCK4 1378 aa16.93■□□□□ 0.3
PRPF40B-209ENST00000548825 CHAMP1Q96JM3 812 aa16.93■□□□□ 0.3
PRPF40B-209ENST00000548825 MAP3K19Q56UN5 1328 aa16.92■□□□□ 0.3
PRPF40B-209ENST00000548825 CDC45O75419 566 aa16.92■□□□□ 0.3
PRPF40B-209ENST00000548825 BMP2KLQ5H9B9 411 aa16.92■□□□□ 0.3
PRPF40B-209ENST00000548825 TNPO1Q92973 898 aaKnown RBP16.92■□□□□ 0.3
PRPF40B-209ENST00000548825 IL1RAPL2Q9NP60 686 aa16.92■□□□□ 0.3
PRPF40B-209ENST00000548825 GSPT1P15170 499 aaKnown RBP16.91■□□□□ 0.3
PRPF40B-209ENST00000548825 ARHGEF40Q8TER5 1519 aa16.91■□□□□ 0.3
PRPF40B-209ENST00000548825 SSFA2P28290 1259 aa16.91■□□□□ 0.3
PRPF40B-209ENST00000548825 ARHGAP31Q2M1Z3 1444 aa16.91■□□□□ 0.3
PRPF40B-209ENST00000548825 A2ML1A8K2U0 1454 aa16.9■□□□□ 0.3
PRPF40B-209ENST00000548825 GAS2L2Q8NHY3 880 aa16.9■□□□□ 0.3
PRPF40B-209ENST00000548825 MYO3AQ8NEV4 1616 aa16.9■□□□□ 0.3
PRPF40B-209ENST00000548825 PLEKHM2Q8IWE5 1019 aa16.9■□□□□ 0.3
PRPF40B-209ENST00000548825 FAM135BQ49AJ0 1406 aa16.89■□□□□ 0.3
PRPF40B-209ENST00000548825 PNPLA6Q8IY17 1366 aa16.89■□□□□ 0.29
PRPF40B-209ENST00000548825 EYA1Q99502 592 aa16.89■□□□□ 0.29
PRPF40B-209ENST00000548825 ZFYVE9O95405 1425 aa16.88■□□□□ 0.29
PRPF40B-209ENST00000548825 MSH6P52701 1360 aa16.88■□□□□ 0.29
PRPF40B-209ENST00000548825 TNRQ92752 1358 aa16.88■□□□□ 0.29
PRPF40B-209ENST00000548825 COL3A1P02461 1466 aaPredicted RBP16.88■□□□□ 0.29
PRPF40B-209ENST00000548825 EDC4Q6P2E9 1401 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-209ENST00000548825 CASC1Q6TDU7 716 aa16.88■□□□□ 0.29
PRPF40B-209ENST00000548825 CFAP74Q9C0B2 1584 aa16.88■□□□□ 0.29
PRPF40B-209ENST00000548825 LARP6Q9BRS8 491 aaKnown RBP16.88■□□□□ 0.29
PRPF40B-209ENST00000548825 NLRP1Q9C000 1473 aa16.87■□□□□ 0.29
PRPF40B-209ENST00000548825 SDSP20132 328 aa16.87■□□□□ 0.29
PRPF40B-209ENST00000548825 CPS1P31327 1500 aa16.87■□□□□ 0.29
PRPF40B-209ENST00000548825 ZNF853P0CG23 659 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms