RNA–Protein interactions for RNA: ENST00000548481.1

CNTN1-206, Transcript of contactin 1, humanhuman

TSL 3

Gene CNTN1, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1-206ENST00000548481 TMC1Q8TDI8 760 aa10.37□□□□□ -0.75
CNTN1-206ENST00000548481 NUDT16Q96DE0 195 aaKnown RBP10.37□□□□□ -0.75
CNTN1-206ENST00000548481 TRPM3Q9HCF6 1732 aaPredicted RBP10.37□□□□□ -0.75
CNTN1-206ENST00000548481 C1orf167Q5SNV9 1468 aa10.36□□□□□ -0.75
CNTN1-206ENST00000548481 PHLPP1O60346 1717 aa10.36□□□□□ -0.75
CNTN1-206ENST00000548481 CADPS2Q86UW7 1296 aa10.36□□□□□ -0.75
CNTN1-206ENST00000548481 PUS7Q96PZ0 661 aaKnown RBP10.36□□□□□ -0.75
CNTN1-206ENST00000548481 NINLQ9Y2I6 1382 aa10.36□□□□□ -0.75
CNTN1-206ENST00000548481 MARF1Q9Y4F3 1742 aaKnown RBP10.34□□□□□ -0.75
CNTN1-206ENST00000548481 PSEN1P49768 467 aa10.34□□□□□ -0.75
CNTN1-206ENST00000548481 DDX10Q13206 875 aaKnown RBP10.34□□□□□ -0.75
CNTN1-206ENST00000548481 CD163L1Q9NR16 1453 aa10.34□□□□□ -0.75
CNTN1-206ENST00000548481 PIK3C2AO00443 1686 aa10.34□□□□□ -0.75
CNTN1-206ENST00000548481 USP54Q70EL1 1684 aa10.34□□□□□ -0.75
CNTN1-206ENST00000548481 ALS2Q96Q42 1657 aa10.34□□□□□ -0.75
CNTN1-206ENST00000548481 ECM2O94769 699 aaPredicted RBP10.33□□□□□ -0.76
CNTN1-206ENST00000548481 ESCO1Q5FWF5 840 aa10.33□□□□□ -0.76
CNTN1-206ENST00000548481 CABP1Q9NZU7 370 aa10.33□□□□□ -0.76
CNTN1-206ENST00000548481 A0A1W2PP64 1363 aa10.33□□□□□ -0.76
CNTN1-206ENST00000548481 ANKRD36BQ8N2N9 1353 aa10.33□□□□□ -0.76
CNTN1-206ENST00000548481 HDGFL2Q7Z4V5 671 aaPredicted RBP10.32□□□□□ -0.76
CNTN1-206ENST00000548481 PMFBP1Q8TBY8 1022 aa10.32□□□□□ -0.76
CNTN1-206ENST00000548481 CERKQ8TCT0 537 aa10.32□□□□□ -0.76
CNTN1-206ENST00000548481 L3MBTL3Q96JM7 780 aaPredicted RBP10.32□□□□□ -0.76
CNTN1-206ENST00000548481 SLC12A5Q9H2X9 1139 aa10.32□□□□□ -0.76
CNTN1-206ENST00000548481 PHF8Q9UPP1 1060 aa10.32□□□□□ -0.76
CNTN1-206ENST00000548481 MAP2P11137 1827 aaKnown RBP10.32□□□□□ -0.76
CNTN1-206ENST00000548481 ABCA3Q99758 1704 aa10.32□□□□□ -0.76
CNTN1-206ENST00000548481 KTN1Q86UP2 1357 aaKnown RBP10.31□□□□□ -0.76
CNTN1-206ENST00000548481 CRYBG1Q9Y4K1 1723 aa10.31□□□□□ -0.76
CNTN1-206ENST00000548481 MKRN3Q13064 507 aaKnown RBP10.31□□□□□ -0.76
CNTN1-206ENST00000548481 DPY19L2Q6NUT2 758 aa10.31□□□□□ -0.76
CNTN1-206ENST00000548481 NGDNQ8NEJ9 315 aaKnown RBP10.31□□□□□ -0.76
CNTN1-206ENST00000548481 ORAI2Q96SN7 254 aa10.31□□□□□ -0.76
CNTN1-206ENST00000548481 KRTAP3-3Q9BYR6 98 aa10.31□□□□□ -0.76
CNTN1-206ENST00000548481 KRTAP3-2Q9BYR7 98 aa10.31□□□□□ -0.76
CNTN1-206ENST00000548481 PANK3Q9H999 370 aa10.31□□□□□ -0.76
CNTN1-206ENST00000548481 TERF2IPQ9NYB0 399 aa10.31□□□□□ -0.76
CNTN1-206ENST00000548481 AHDC1Q5TGY3 1603 aaPredicted RBP10.31□□□□□ -0.76
CNTN1-206ENST00000548481 PHRF1Q9P1Y6 1649 aaKnown RBP10.31□□□□□ -0.76
CNTN1-206ENST00000548481 LTN1O94822 1766 aa10.31□□□□□ -0.76
CNTN1-206ENST00000548481 CPSF1Q10570 1443 aaKnown RBP10.31□□□□□ -0.76
CNTN1-206ENST00000548481 NSD3Q9BZ95 1437 aa10.31□□□□□ -0.76
CNTN1-206ENST00000548481 ACEP12821 1306 aa10.31□□□□□ -0.76
CNTN1-206ENST00000548481 POLR3AO14802 1390 aaPredicted RBP10.3□□□□□ -0.76
CNTN1-206ENST00000548481 PLEKHG3A1L390 1219 aa10.3□□□□□ -0.76
CNTN1-206ENST00000548481 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.3□□□□□ -0.76
CNTN1-206ENST00000548481 SLAIN2Q9P270 581 aa10.3□□□□□ -0.76
CNTN1-206ENST00000548481 USP6P35125 1406 aa10.3□□□□□ -0.76
CNTN1-206ENST00000548481 TOM1O60784 492 aa10.29□□□□□ -0.76
CNTN1-206ENST00000548481 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
CNTN1-206ENST00000548481 C3orf67Q6ZVT6 689 aa10.29□□□□□ -0.76
CNTN1-206ENST00000548481 EDC4Q6P2E9 1401 aaKnown RBP10.29□□□□□ -0.76
CNTN1-206ENST00000548481 COL16A1Q07092 1604 aaPredicted RBP10.29□□□□□ -0.76
CNTN1-206ENST00000548481 UBAP1LF5GYI3 381 aa10.28□□□□□ -0.76
CNTN1-206ENST00000548481 PXDNQ92626 1479 aa10.28□□□□□ -0.76
CNTN1-206ENST00000548481 BRINP3Q76B58 766 aa10.27□□□□□ -0.77
CNTN1-206ENST00000548481 SHPRHQ149N8 1683 aa10.26□□□□□ -0.77
CNTN1-206ENST00000548481 FOXO3O43524 673 aa10.26□□□□□ -0.77
CNTN1-206ENST00000548481 HOXB3P14651 431 aaPredicted RBP10.26□□□□□ -0.77
CNTN1-206ENST00000548481 EMP3P54852 163 aa10.26□□□□□ -0.77
CNTN1-206ENST00000548481 PIP4K2BP78356 416 aa10.26□□□□□ -0.77
CNTN1-206ENST00000548481 PSME1Q06323 249 aa10.26□□□□□ -0.77
CNTN1-206ENST00000548481 CNGB1Q14028 1251 aaPredicted RBP10.26□□□□□ -0.77
CNTN1-206ENST00000548481 KNSTRNQ9Y448 316 aa10.26□□□□□ -0.77
CNTN1-206ENST00000548481 NPHP3Q7Z494 1330 aa10.26□□□□□ -0.77
CNTN1-206ENST00000548481 RGPD5Q99666 1765 aa10.26□□□□□ -0.77
CNTN1-206ENST00000548481 COL22A1Q8NFW1 1626 aaPredicted RBP10.25□□□□□ -0.77
CNTN1-206ENST00000548481 XPCQ01831 940 aaPredicted RBP10.25□□□□□ -0.77
CNTN1-206ENST00000548481 PDAP1Q13442 181 aaKnown RBP10.25□□□□□ -0.77
CNTN1-206ENST00000548481 DIEXFQ68CQ4 756 aaKnown RBP10.25□□□□□ -0.77
CNTN1-206ENST00000548481 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.25□□□□□ -0.77
CNTN1-206ENST00000548481 DDX17Q92841 729 aaKnown RBP10.25□□□□□ -0.77
CNTN1-206ENST00000548481 CARD14Q9BXL6 1004 aa10.25□□□□□ -0.77
CNTN1-206ENST00000548481 BRD4O60885 1362 aaPredicted RBP10.25□□□□□ -0.77
CNTN1-206ENST00000548481 SSH2Q76I76 1423 aa10.24□□□□□ -0.77
CNTN1-206ENST00000548481 RGL2O15211 777 aa10.24□□□□□ -0.77
CNTN1-206ENST00000548481 GOLGA2Q08379 1002 aa10.24□□□□□ -0.77
CNTN1-206ENST00000548481 KRT28Q7Z3Y7 464 aa10.24□□□□□ -0.77
CNTN1-206ENST00000548481 HS3ST6Q96QI5 342 aa10.24□□□□□ -0.77
CNTN1-206ENST00000548481 CGNL1Q0VF96 1302 aa10.24□□□□□ -0.77
CNTN1-206ENST00000548481 TTC21BQ7Z4L5 1316 aa10.24□□□□□ -0.77
CNTN1-206ENST00000548481 TTC21AQ8NDW8 1320 aa10.24□□□□□ -0.77
CNTN1-206ENST00000548481 NSD2O96028 1365 aa10.24□□□□□ -0.77
CNTN1-206ENST00000548481 TNS3Q68CZ2 1445 aa10.24□□□□□ -0.77
CNTN1-206ENST00000548481 MED1Q15648 1581 aaPredicted RBP10.23□□□□□ -0.77
CNTN1-206ENST00000548481 PER1O15534 1290 aaPredicted RBP10.23□□□□□ -0.77
CNTN1-206ENST00000548481 CC2D1BQ5T0F9 858 aaKnown RBP10.23□□□□□ -0.77
CNTN1-206ENST00000548481 SBNO1A3KN83 1393 aa10.22□□□□□ -0.77
CNTN1-206ENST00000548481 OVOS2A0A0J9YW53 1432 aa10.22□□□□□ -0.77
CNTN1-206ENST00000548481 OVOS2Q6IE36 1432 aa10.22□□□□□ -0.77
CNTN1-206ENST00000548481 SLIT3O75094 1523 aa10.22□□□□□ -0.77
CNTN1-206ENST00000548481 LMOD2Q6P5Q4 547 aa10.21□□□□□ -0.77
CNTN1-206ENST00000548481 NME9Q86XW9 330 aa10.21□□□□□ -0.77
CNTN1-206ENST00000548481 GGNBP2Q9H3C7 697 aa10.21□□□□□ -0.77
CNTN1-206ENST00000548481 NPC1L1Q9UHC9 1359 aa10.21□□□□□ -0.78
CNTN1-206ENST00000548481 ANP32CO43423 234 aa10.2□□□□□ -0.78
CNTN1-206ENST00000548481 SOS2Q07890 1332 aaPredicted RBP10.2□□□□□ -0.78
CNTN1-206ENST00000548481 ABTB2Q8N961 1025 aa10.2□□□□□ -0.78
CNTN1-206ENST00000548481 PEAK1Q9H792 1746 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms