RNA–Protein interactions for RNA: ENST00000548346.1

NPIPB12-203, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 2

Gene NPIPB12, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-203ENST00000548346 LRRC7Q96NW7 1537 aa8.2□□□□□ -1.1
NPIPB12-203ENST00000548346 ADH1BP00325 375 aa8.2□□□□□ -1.1
NPIPB12-203ENST00000548346 THAP11Q96EK4 314 aa8.2□□□□□ -1.1
NPIPB12-203ENST00000548346 TMUB1Q9BVT8 246 aa8.2□□□□□ -1.1
NPIPB12-203ENST00000548346 V9GY48 417 aaPredicted RBP8.2□□□□□ -1.1
NPIPB12-203ENST00000548346 PREX2Q70Z35 1606 aa8.2□□□□□ -1.1
NPIPB12-203ENST00000548346 MINK1Q8N4C8 1332 aaPredicted RBP8.2□□□□□ -1.1
NPIPB12-203ENST00000548346 SYNMO15061 1565 aa8.19□□□□□ -1.1
NPIPB12-203ENST00000548346 NR1I2O75469 434 aa8.19□□□□□ -1.1
NPIPB12-203ENST00000548346 CD46P15529 392 aa8.19□□□□□ -1.1
NPIPB12-203ENST00000548346 MDM2Q00987 491 aaPredicted RBP8.19□□□□□ -1.1
NPIPB12-203ENST00000548346 PLA2G2CQ5R387 149 aa8.19□□□□□ -1.1
NPIPB12-203ENST00000548346 REPIN1Q9BWE0 567 aaKnown RBP8.19□□□□□ -1.1
NPIPB12-203ENST00000548346 FMN1Q68DA7 1419 aa8.19□□□□□ -1.1
NPIPB12-203ENST00000548346 DEPDC5O75140 1603 aa8.18□□□□□ -1.1
NPIPB12-203ENST00000548346 SLC27A5Q9Y2P5 690 aa8.18□□□□□ -1.1
NPIPB12-203ENST00000548346 NPHP4O75161 1426 aaPredicted RBP8.18□□□□□ -1.1
NPIPB12-203ENST00000548346 TULP1O00294 542 aaPredicted RBP8.17□□□□□ -1.1
NPIPB12-203ENST00000548346 RANGAP1P46060 587 aaPredicted RBP8.17□□□□□ -1.1
NPIPB12-203ENST00000548346 TRIM67Q6ZTA4 783 aa8.17□□□□□ -1.1
NPIPB12-203ENST00000548346 ANKLE2Q86XL3 938 aa8.17□□□□□ -1.1
NPIPB12-203ENST00000548346 SULF1Q8IWU6 871 aa8.17□□□□□ -1.1
NPIPB12-203ENST00000548346 TNRQ92752 1358 aa8.17□□□□□ -1.1
NPIPB12-203ENST00000548346 A2MP01023 1474 aa8.17□□□□□ -1.1
NPIPB12-203ENST00000548346 SPAG9O60271 1321 aaKnown RBP8.16□□□□□ -1.1
NPIPB12-203ENST00000548346 GGCXP38435 758 aa8.16□□□□□ -1.1
NPIPB12-203ENST00000548346 ATP6V1AP38606 617 aa8.16□□□□□ -1.1
NPIPB12-203ENST00000548346 ATP7AQ04656 1500 aa8.16□□□□□ -1.1
NPIPB12-203ENST00000548346 FAM135BQ49AJ0 1406 aa8.16□□□□□ -1.1
NPIPB12-203ENST00000548346 RSPH4AQ5TD94 716 aa8.16□□□□□ -1.1
NPIPB12-203ENST00000548346 LIAT1Q6ZQX7 453 aa8.16□□□□□ -1.1
NPIPB12-203ENST00000548346 FAM160A2Q8N612 972 aaPredicted RBP8.16□□□□□ -1.1
NPIPB12-203ENST00000548346 ANKLE1Q8NAG6 615 aa8.16□□□□□ -1.1
NPIPB12-203ENST00000548346 ZC3H15Q8WU90 426 aaKnown RBP8.16□□□□□ -1.1
NPIPB12-203ENST00000548346 HLA-CQ95604 372 aa8.16□□□□□ -1.1
NPIPB12-203ENST00000548346 SPSB2Q99619 263 aa8.16□□□□□ -1.1
NPIPB12-203ENST00000548346 INO80Q9ULG1 1556 aaPredicted RBP8.16□□□□□ -1.1
NPIPB12-203ENST00000548346 NLRP1Q9C000 1473 aa8.15□□□□□ -1.1
NPIPB12-203ENST00000548346 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.15□□□□□ -1.1
NPIPB12-203ENST00000548346 ZMYND10O75800 440 aa8.15□□□□□ -1.1
NPIPB12-203ENST00000548346 RNF19BQ6ZMZ0 732 aa8.15□□□□□ -1.1
NPIPB12-203ENST00000548346 BARGINQ6ZT62 677 aa8.15□□□□□ -1.1
NPIPB12-203ENST00000548346 STRCP1A6NGW2 1772 aa8.15□□□□□ -1.11
NPIPB12-203ENST00000548346 SETD1AO15047 1707 aaKnown RBP8.15□□□□□ -1.11
NPIPB12-203ENST00000548346 FAM135AQ9P2D6 1515 aa8.14□□□□□ -1.11
NPIPB12-203ENST00000548346 PZPP20742 1482 aa8.14□□□□□ -1.11
NPIPB12-203ENST00000548346 EEA1Q15075 1411 aa8.14□□□□□ -1.11
NPIPB12-203ENST00000548346 KIAA1107Q9UPP5 1409 aa8.14□□□□□ -1.11
NPIPB12-203ENST00000548346 GFRA3O60609 400 aa8.14□□□□□ -1.11
NPIPB12-203ENST00000548346 GGT6Q6P531 493 aa8.14□□□□□ -1.11
NPIPB12-203ENST00000548346 THEMISQ8N1K5 641 aaPredicted RBP8.14□□□□□ -1.11
NPIPB12-203ENST00000548346 SLC6A16Q9GZN6 736 aa8.14□□□□□ -1.11
NPIPB12-203ENST00000548346 PRDM9Q9NQV7 894 aa8.14□□□□□ -1.11
NPIPB12-203ENST00000548346 SYCP2Q9BX26 1530 aa8.13□□□□□ -1.11
NPIPB12-203ENST00000548346 BRICD5Q6PL45 260 aa8.13□□□□□ -1.11
NPIPB12-203ENST00000548346 FAM217BQ9NTX9 383 aaPredicted RBP8.13□□□□□ -1.11
NPIPB12-203ENST00000548346 IQGAP1P46940 1657 aa8.13□□□□□ -1.11
NPIPB12-203ENST00000548346 SLC19A1P41440 591 aa8.12□□□□□ -1.11
NPIPB12-203ENST00000548346 UGGT1Q9NYU2 1555 aa8.12□□□□□ -1.11
NPIPB12-203ENST00000548346 ARHGAP35Q9NRY4 1499 aa8.12□□□□□ -1.11
NPIPB12-203ENST00000548346 CDC42BPAQ5VT25 1732 aa8.12□□□□□ -1.11
NPIPB12-203ENST00000548346 MIA2Q96PC5 1412 aa8.12□□□□□ -1.11
NPIPB12-203ENST00000548346 SPRYD7Q5W111 196 aa8.11□□□□□ -1.11
NPIPB12-203ENST00000548346 FBXO31Q5XUX0 539 aaPredicted RBP8.11□□□□□ -1.11
NPIPB12-203ENST00000548346 Q6ZNB5 142 aa8.11□□□□□ -1.11
NPIPB12-203ENST00000548346 GPCPD1Q9NPB8 672 aa8.11□□□□□ -1.11
NPIPB12-203ENST00000548346 ATP1B4Q9UN42 357 aaPredicted RBP8.11□□□□□ -1.11
NPIPB12-203ENST00000548346 PLEKHH2Q8IVE3 1493 aa8.11□□□□□ -1.11
NPIPB12-203ENST00000548346 KDM5DQ9BY66 1539 aa8.1□□□□□ -1.11
NPIPB12-203ENST00000548346 SALL2Q9Y467 1007 aaPredicted RBP8.1□□□□□ -1.11
NPIPB12-203ENST00000548346 LRRIQ1Q96JM4 1722 aa8.09□□□□□ -1.11
NPIPB12-203ENST00000548346 GPATCH8Q9UKJ3 1502 aaKnown RBP8.09□□□□□ -1.11
NPIPB12-203ENST00000548346 ZC3H13Q5T200 1668 aaKnown RBP8.09□□□□□ -1.11
NPIPB12-203ENST00000548346 ADGBQ8N7X0 1667 aa8.09□□□□□ -1.11
NPIPB12-203ENST00000548346 CCDC18Q5T9S5 1454 aa8.09□□□□□ -1.11
NPIPB12-203ENST00000548346 NRG2O14511 850 aaPredicted RBP8.09□□□□□ -1.11
NPIPB12-203ENST00000548346 KDM4AO75164 1064 aa8.09□□□□□ -1.11
NPIPB12-203ENST00000548346 HNRNPMP52272 730 aaKnown RBP eCLIP8.09□□□□□ -1.11
NPIPB12-203ENST00000548346 GUCA2AQ02747 115 aa8.09□□□□□ -1.11
NPIPB12-203ENST00000548346 PDZRN3Q9UPQ7 1066 aa8.09□□□□□ -1.11
NPIPB12-203ENST00000548346 HOXA2O43364 376 aa8.08□□□□□ -1.12
NPIPB12-203ENST00000548346 FMNL1O95466 1100 aaPredicted RBP8.08□□□□□ -1.12
NPIPB12-203ENST00000548346 CLCN1P35523 988 aa8.08□□□□□ -1.12
NPIPB12-203ENST00000548346 DHX29Q7Z478 1369 aaKnown RBP8.08□□□□□ -1.12
NPIPB12-203ENST00000548346 RTEL1-TNFRSF6BF6WH68 1400 aa8.07□□□□□ -1.12
NPIPB12-203ENST00000548346 LAPTM4AQ15012 233 aa8.07□□□□□ -1.12
NPIPB12-203ENST00000548346 FCF1Q9Y324 198 aaKnown RBP8.07□□□□□ -1.12
NPIPB12-203ENST00000548346 XIRP1Q702N8 1843 aaKnown RBP8.07□□□□□ -1.12
NPIPB12-203ENST00000548346 LRRC9Q6ZRR7 1453 aa8.06□□□□□ -1.12
NPIPB12-203ENST00000548346 CDK12Q9NYV4 1490 aaPredicted RBP8.06□□□□□ -1.12
NPIPB12-203ENST00000548346 ZEB1P37275 1124 aaPredicted RBP8.06□□□□□ -1.12
NPIPB12-203ENST00000548346 AMHR2Q16671 573 aa8.06□□□□□ -1.12
NPIPB12-203ENST00000548346 MSS51Q4VC12 460 aa8.06□□□□□ -1.12
NPIPB12-203ENST00000548346 ZNF598Q86UK7 904 aaKnown RBP8.06□□□□□ -1.12
NPIPB12-203ENST00000548346 ZNF777Q9ULD5 760 aaPredicted RBP8.06□□□□□ -1.12
NPIPB12-203ENST00000548346 JCADQ9P266 1359 aa8.06□□□□□ -1.12
NPIPB12-203ENST00000548346 SCAF11Q99590 1463 aaKnown RBP8.06□□□□□ -1.12
NPIPB12-203ENST00000548346 ROBO1Q9Y6N7 1651 aa8.05□□□□□ -1.12
NPIPB12-203ENST00000548346 CASKIN1Q8WXD9 1431 aa8.05□□□□□ -1.12
NPIPB12-203ENST00000548346 GDF9O60383 454 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms