RNA–Protein interactions for RNA: ENST00000548108.1

TFCP2-203, Transcript of transcription factor CP2, humanhuman

TSL 1 (best)

Gene TFCP2, Length 1,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2-203ENST00000548108 MSH6P52701 1360 aa16.47■□□□□ 0.23
TFCP2-203ENST00000548108 PRKAR2BP31323 418 aa16.46■□□□□ 0.23
TFCP2-203ENST00000548108 RRP7AQ9Y3A4 280 aaKnown RBP16.46■□□□□ 0.23
TFCP2-203ENST00000548108 IL16Q14005 1332 aa16.46■□□□□ 0.23
TFCP2-203ENST00000548108 KIF1AQ12756 1690 aa16.46■□□□□ 0.23
TFCP2-203ENST00000548108 NEFMP07197 916 aa16.45■□□□□ 0.22
TFCP2-203ENST00000548108 KRT28Q7Z3Y7 464 aa16.45■□□□□ 0.22
TFCP2-203ENST00000548108 NEUROD2Q15784 382 aa16.45■□□□□ 0.22
TFCP2-203ENST00000548108 PEAK1Q9H792 1746 aa16.44■□□□□ 0.22
TFCP2-203ENST00000548108 MARF1Q9Y4F3 1742 aaKnown RBP16.44■□□□□ 0.22
TFCP2-203ENST00000548108 RRP1P56182 461 aaKnown RBP16.44■□□□□ 0.22
TFCP2-203ENST00000548108 RIPK4P57078 832 aa16.44■□□□□ 0.22
TFCP2-203ENST00000548108 AMPHP49418 695 aa16.43■□□□□ 0.22
TFCP2-203ENST00000548108 NFE2L2Q16236 605 aa16.43■□□□□ 0.22
TFCP2-203ENST00000548108 PHACTR3Q96KR7 559 aa16.43■□□□□ 0.22
TFCP2-203ENST00000548108 RTL1A6NKG5 1358 aa16.43■□□□□ 0.22
TFCP2-203ENST00000548108 HMOX1P09601 288 aa16.42■□□□□ 0.22
TFCP2-203ENST00000548108 HOXC9P31274 260 aa16.42■□□□□ 0.22
TFCP2-203ENST00000548108 MYH16Q9H6N6 1097 aa16.42■□□□□ 0.22
TFCP2-203ENST00000548108 USP19O94966 1318 aa16.42■□□□□ 0.22
TFCP2-203ENST00000548108 ZNF335Q9H4Z2 1342 aaPredicted RBP16.42■□□□□ 0.22
TFCP2-203ENST00000548108 ARHGEF10O15013 1369 aa16.41■□□□□ 0.22
TFCP2-203ENST00000548108 KDRP35968 1356 aa16.41■□□□□ 0.22
TFCP2-203ENST00000548108 NUTM2GQ5VZR2 741 aa16.41■□□□□ 0.22
TFCP2-203ENST00000548108 IP6K1Q92551 441 aa16.41■□□□□ 0.22
TFCP2-203ENST00000548108 NPHP3Q7Z494 1330 aa16.4■□□□□ 0.22
TFCP2-203ENST00000548108 PPP4R2Q9NY27 417 aa16.4■□□□□ 0.22
TFCP2-203ENST00000548108 RGPD1P0DJD0 1748 aa16.4■□□□□ 0.22
TFCP2-203ENST00000548108 NFAT5O94916 1531 aa16.4■□□□□ 0.22
TFCP2-203ENST00000548108 IGSF1Q8N6C5 1336 aa16.4■□□□□ 0.22
TFCP2-203ENST00000548108 GCP02774 474 aa16.4■□□□□ 0.22
TFCP2-203ENST00000548108 CT47B1P0C2W7 299 aaPredicted RBP16.4■□□□□ 0.22
TFCP2-203ENST00000548108 SULT6B1Q6IMI4 303 aa16.4■□□□□ 0.22
TFCP2-203ENST00000548108 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.22
TFCP2-203ENST00000548108 SLIT3O75094 1523 aa16.39■□□□□ 0.21
TFCP2-203ENST00000548108 SOX12O15370 315 aa16.39■□□□□ 0.21
TFCP2-203ENST00000548108 IRX6P78412 446 aaPredicted RBP16.39■□□□□ 0.21
TFCP2-203ENST00000548108 ARHGEF25Q86VW2 580 aa16.39■□□□□ 0.21
TFCP2-203ENST00000548108 XIRP1Q702N8 1843 aaKnown RBP16.38■□□□□ 0.21
TFCP2-203ENST00000548108 CALD1Q05682 793 aaKnown RBP16.38■□□□□ 0.21
TFCP2-203ENST00000548108 LMOD3Q0VAK6 560 aa16.38■□□□□ 0.21
TFCP2-203ENST00000548108 EYA1Q99502 592 aa16.38■□□□□ 0.21
TFCP2-203ENST00000548108 SLAIN2Q9P270 581 aa16.38■□□□□ 0.21
TFCP2-203ENST00000548108 PHRF1Q9P1Y6 1649 aaKnown RBP16.37■□□□□ 0.21
TFCP2-203ENST00000548108 XPCQ01831 940 aaPredicted RBP16.36■□□□□ 0.21
TFCP2-203ENST00000548108 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
TFCP2-203ENST00000548108 BRINP3Q76B58 766 aa16.35■□□□□ 0.21
TFCP2-203ENST00000548108 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.35■□□□□ 0.21
TFCP2-203ENST00000548108 ZNF853P0CG23 659 aa16.34■□□□□ 0.21
TFCP2-203ENST00000548108 ALS2Q96Q42 1657 aa16.34■□□□□ 0.21
TFCP2-203ENST00000548108 PXDNQ92626 1479 aa16.33■□□□□ 0.21
TFCP2-203ENST00000548108 SPATA31A3Q5VYP0 1347 aa16.33■□□□□ 0.2
TFCP2-203ENST00000548108 SOS2Q07890 1332 aaPredicted RBP16.32■□□□□ 0.2
TFCP2-203ENST00000548108 FANCIQ9NVI1 1328 aa16.32■□□□□ 0.2
TFCP2-203ENST00000548108 IFT57Q9NWB7 429 aa16.32■□□□□ 0.2
TFCP2-203ENST00000548108 HTATSF1O43719 755 aaKnown RBP16.31■□□□□ 0.2
TFCP2-203ENST00000548108 RARSP54136 660 aaKnown RBP16.31■□□□□ 0.2
TFCP2-203ENST00000548108 TNS3Q68CZ2 1445 aa16.31■□□□□ 0.2
TFCP2-203ENST00000548108 GNAI1P63096 354 aa16.3■□□□□ 0.2
TFCP2-203ENST00000548108 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
TFCP2-203ENST00000548108 CFAP44Q96MT7 982 aa16.3■□□□□ 0.2
TFCP2-203ENST00000548108 LMOD2Q6P5Q4 547 aa16.29■□□□□ 0.2
TFCP2-203ENST00000548108 GAS2L2Q8NHY3 880 aa16.29■□□□□ 0.2
TFCP2-203ENST00000548108 DDX17Q92841 729 aaKnown RBP16.29■□□□□ 0.2
TFCP2-203ENST00000548108 PLIN1O60240 522 aa16.29■□□□□ 0.2
TFCP2-203ENST00000548108 BCAR3O75815 825 aa16.29■□□□□ 0.2
TFCP2-203ENST00000548108 PDE3AQ14432 1141 aa16.29■□□□□ 0.2
TFCP2-203ENST00000548108 MTHFSDQ2M296 383 aaKnown RBP16.28■□□□□ 0.2
TFCP2-203ENST00000548108 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
TFCP2-203ENST00000548108 TSR2Q969E8 191 aaKnown RBP16.28■□□□□ 0.2
TFCP2-203ENST00000548108 NCAPD2Q15021 1401 aa16.28■□□□□ 0.2
TFCP2-203ENST00000548108 MED1Q15648 1581 aaPredicted RBP16.28■□□□□ 0.2
TFCP2-203ENST00000548108 EXOSC9Q06265 439 aaKnown RBP16.27■□□□□ 0.2
TFCP2-203ENST00000548108 NBPF6Q5VWK0 638 aa16.27■□□□□ 0.2
TFCP2-203ENST00000548108 NBPF4Q96M43 638 aa16.27■□□□□ 0.2
TFCP2-203ENST00000548108 LTN1O94822 1766 aa16.27■□□□□ 0.19
TFCP2-203ENST00000548108 CPDO75976 1380 aa16.26■□□□□ 0.19
TFCP2-203ENST00000548108 CHL1O00533 1208 aa16.25■□□□□ 0.19
TFCP2-203ENST00000548108 BRPF1P55201 1214 aaPredicted RBP16.25■□□□□ 0.19
TFCP2-203ENST00000548108 EXOC6Q8TAG9 804 aa16.25■□□□□ 0.19
TFCP2-203ENST00000548108 AXIN2Q9Y2T1 843 aa16.25■□□□□ 0.19
TFCP2-203ENST00000548108 ABCC6O95255 1503 aa16.24■□□□□ 0.19
TFCP2-203ENST00000548108 FAM83GA6ND36 823 aa16.24■□□□□ 0.19
TFCP2-203ENST00000548108 ALDH1L2Q3SY69 923 aa16.24■□□□□ 0.19
TFCP2-203ENST00000548108 C20orf194Q5TEA3 1177 aa16.24■□□□□ 0.19
TFCP2-203ENST00000548108 LTV1Q96GA3 475 aaPredicted RBP16.24■□□□□ 0.19
TFCP2-203ENST00000548108 THUMPD2Q9BTF0 503 aaKnown RBP16.24■□□□□ 0.19
TFCP2-203ENST00000548108 UBAP1LF5GYI3 381 aa16.23■□□□□ 0.19
TFCP2-203ENST00000548108 ANKRD24Q8TF21 1146 aa16.23■□□□□ 0.19
TFCP2-203ENST00000548108 MBIPQ9NS73 344 aa16.23■□□□□ 0.19
TFCP2-203ENST00000548108 B4GALNT3Q6L9W6 998 aa16.22■□□□□ 0.19
TFCP2-203ENST00000548108 RTF1Q92541 710 aaKnown RBP16.22■□□□□ 0.19
TFCP2-203ENST00000548108 CRBNQ96SW2 442 aa16.22■□□□□ 0.19
TFCP2-203ENST00000548108 DLG5Q8TDM6 1919 aa16.22■□□□□ 0.19
TFCP2-203ENST00000548108 ERBB3P21860 1342 aa16.22■□□□□ 0.19
TFCP2-203ENST00000548108 PLEKHG2Q9H7P9 1386 aa16.22■□□□□ 0.19
TFCP2-203ENST00000548108 CRB1P82279 1406 aa16.22■□□□□ 0.19
TFCP2-203ENST00000548108 GNAT3A8MTJ3 354 aa16.21■□□□□ 0.19
TFCP2-203ENST00000548108 VAMP4O75379 141 aa16.21■□□□□ 0.19
TFCP2-203ENST00000548108 ZC3H6P61129 1189 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms