RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 CABP2Q9NPB3 220 aa10.81□□□□□ -0.68
CCDC65-203ENST00000547861 NSD2O96028 1365 aa10.8□□□□□ -0.68
CCDC65-203ENST00000547861 ABCC11Q96J66 1382 aa10.8□□□□□ -0.68
CCDC65-203ENST00000547861 PLEKHH1Q9ULM0 1364 aa10.8□□□□□ -0.68
CCDC65-203ENST00000547861 NUTM2FA1L443 756 aa10.8□□□□□ -0.68
CCDC65-203ENST00000547861 MAP2P11137 1827 aaKnown RBP10.8□□□□□ -0.68
CCDC65-203ENST00000547861 RGS12O14924 1447 aa10.79□□□□□ -0.68
CCDC65-203ENST00000547861 POGKQ9P215 609 aa10.79□□□□□ -0.68
CCDC65-203ENST00000547861 ATP7BP35670 1465 aa10.79□□□□□ -0.68
CCDC65-203ENST00000547861 CDC42BPGQ6DT37 1551 aa10.79□□□□□ -0.68
CCDC65-203ENST00000547861 NRKQ7Z2Y5 1582 aa10.79□□□□□ -0.68
CCDC65-203ENST00000547861 XPCQ01831 940 aaPredicted RBP10.78□□□□□ -0.68
CCDC65-203ENST00000547861 USP21Q9UK80 565 aa10.78□□□□□ -0.68
CCDC65-203ENST00000547861 RGPD8O14715 1765 aaPredicted RBP10.78□□□□□ -0.68
CCDC65-203ENST00000547861 NPHP3Q7Z494 1330 aa10.78□□□□□ -0.68
CCDC65-203ENST00000547861 FOXO3O43524 673 aa10.78□□□□□ -0.68
CCDC65-203ENST00000547861 SRPK2P78362 688 aaKnown RBP10.78□□□□□ -0.68
CCDC65-203ENST00000547861 CGNL1Q0VF96 1302 aa10.78□□□□□ -0.68
CCDC65-203ENST00000547861 POLR3AO14802 1390 aaPredicted RBP10.77□□□□□ -0.68
CCDC65-203ENST00000547861 IRX6P78412 446 aaPredicted RBP10.77□□□□□ -0.69
CCDC65-203ENST00000547861 WDR43Q15061 677 aaKnown RBP eCLIP10.77□□□□□ -0.69
CCDC65-203ENST00000547861 COL22A1Q8NFW1 1626 aaPredicted RBP10.76□□□□□ -0.69
CCDC65-203ENST00000547861 FNBP4Q8N3X1 1017 aaPredicted RBP10.76□□□□□ -0.69
CCDC65-203ENST00000547861 OTUD5Q96G74 571 aa10.76□□□□□ -0.69
CCDC65-203ENST00000547861 ADAMTS8Q9UP79 889 aa10.76□□□□□ -0.69
CCDC65-203ENST00000547861 PXDNQ92626 1479 aa10.76□□□□□ -0.69
CCDC65-203ENST00000547861 TRPC5Q9UL62 973 aaPredicted RBP10.75□□□□□ -0.69
CCDC65-203ENST00000547861 POTEB2H3BUK9 544 aa10.75□□□□□ -0.69
CCDC65-203ENST00000547861 MORC1Q86VD1 984 aa10.75□□□□□ -0.69
CCDC65-203ENST00000547861 RNF123Q5XPI4 1314 aa10.75□□□□□ -0.69
CCDC65-203ENST00000547861 COL3A1P02461 1466 aaPredicted RBP10.74□□□□□ -0.69
CCDC65-203ENST00000547861 PDE3BQ13370 1112 aa10.74□□□□□ -0.69
CCDC65-203ENST00000547861 CDK19Q9BWU1 502 aa10.74□□□□□ -0.69
CCDC65-203ENST00000547861 SALL2Q9Y467 1007 aaPredicted RBP10.74□□□□□ -0.69
CCDC65-203ENST00000547861 FMN2Q9NZ56 1722 aa10.74□□□□□ -0.69
CCDC65-203ENST00000547861 ATRNO75882 1429 aa10.73□□□□□ -0.69
CCDC65-203ENST00000547861 EP400Q96L91 3159 aa10.73□□□□□ -0.69
CCDC65-203ENST00000547861 SRCAPQ6ZRS2 3230 aa10.73□□□□□ -0.69
CCDC65-203ENST00000547861 ERICH6BQ5W0A0 696 aa10.72□□□□□ -0.69
CCDC65-203ENST00000547861 MARF1Q9Y4F3 1742 aaKnown RBP10.72□□□□□ -0.69
CCDC65-203ENST00000547861 PPIP5K1Q6PFW1 1433 aa10.72□□□□□ -0.69
CCDC65-203ENST00000547861 KRT28Q7Z3Y7 464 aa10.72□□□□□ -0.69
CCDC65-203ENST00000547861 PROM2Q8N271 834 aa10.72□□□□□ -0.69
CCDC65-203ENST00000547861 SIRT1Q96EB6 747 aa10.72□□□□□ -0.69
CCDC65-203ENST00000547861 TERF2IPQ9NYB0 399 aa10.72□□□□□ -0.69
CCDC65-203ENST00000547861 BCL9LQ86UU0 1499 aa10.71□□□□□ -0.69
CCDC65-203ENST00000547861 SPATA31A3Q5VYP0 1347 aa10.71□□□□□ -0.69
CCDC65-203ENST00000547861 TNNT2P45379 298 aaPredicted RBP10.71□□□□□ -0.69
CCDC65-203ENST00000547861 CPSF1Q10570 1443 aaKnown RBP10.71□□□□□ -0.7
CCDC65-203ENST00000547861 KIF1AQ12756 1690 aa10.71□□□□□ -0.7
CCDC65-203ENST00000547861 ZNF521Q96K83 1311 aa10.7□□□□□ -0.7
CCDC65-203ENST00000547861 WASLO00401 505 aaPredicted RBP10.7□□□□□ -0.7
CCDC65-203ENST00000547861 PLEKHG5O94827 1062 aa10.7□□□□□ -0.7
CCDC65-203ENST00000547861 HDGFL2Q7Z4V5 671 aaPredicted RBP10.7□□□□□ -0.7
CCDC65-203ENST00000547861 CCDC146Q8IYE0 955 aa10.7□□□□□ -0.7
CCDC65-203ENST00000547861 CDCA7LQ96GN5 454 aa10.7□□□□□ -0.7
CCDC65-203ENST00000547861 MS4A3Q96HJ5 214 aa10.7□□□□□ -0.7
CCDC65-203ENST00000547861 PHF8Q9UPP1 1060 aa10.7□□□□□ -0.7
CCDC65-203ENST00000547861 EDC4Q6P2E9 1401 aaKnown RBP10.69□□□□□ -0.7
CCDC65-203ENST00000547861 GJD4Q96KN9 370 aaPredicted RBP10.69□□□□□ -0.7
CCDC65-203ENST00000547861 DLG5Q8TDM6 1919 aa10.69□□□□□ -0.7
CCDC65-203ENST00000547861 ASTLQ6HA08 431 aaPredicted RBP10.68□□□□□ -0.7
CCDC65-203ENST00000547861 CABLES1Q8TDN4 633 aa10.68□□□□□ -0.7
CCDC65-203ENST00000547861 GGNBP2Q9H3C7 697 aa10.68□□□□□ -0.7
CCDC65-203ENST00000547861 CABP1Q9NZU7 370 aa10.68□□□□□ -0.7
CCDC65-203ENST00000547861 MTHFSP49914 203 aa10.67□□□□□ -0.7
CCDC65-203ENST00000547861 HAP1P54257 671 aaPredicted RBP10.67□□□□□ -0.7
CCDC65-203ENST00000547861 PSME1Q06323 249 aa10.67□□□□□ -0.7
CCDC65-203ENST00000547861 LMOD2Q6P5Q4 547 aa10.67□□□□□ -0.7
CCDC65-203ENST00000547861 UNC5CLQ8IV45 518 aa10.67□□□□□ -0.7
CCDC65-203ENST00000547861 PPP4R2Q9NY27 417 aa10.67□□□□□ -0.7
CCDC65-203ENST00000547861 USP54Q70EL1 1684 aa10.67□□□□□ -0.7
CCDC65-203ENST00000547861 TNS3Q68CZ2 1445 aa10.67□□□□□ -0.7
CCDC65-203ENST00000547861 SLIT2O94813 1529 aa10.67□□□□□ -0.7
CCDC65-203ENST00000547861 FYB1O15117 783 aa10.67□□□□□ -0.7
CCDC65-203ENST00000547861 PMFBP1Q8TBY8 1022 aa10.67□□□□□ -0.7
CCDC65-203ENST00000547861 CFAP53Q96M91 514 aa10.67□□□□□ -0.7
CCDC65-203ENST00000547861 RCAN3Q9UKA8 241 aa10.67□□□□□ -0.7
CCDC65-203ENST00000547861 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.66□□□□□ -0.7
CCDC65-203ENST00000547861 PRR36Q9H6K5 1346 aa10.66□□□□□ -0.7
CCDC65-203ENST00000547861 RRP1P56182 461 aaKnown RBP10.66□□□□□ -0.7
CCDC65-203ENST00000547861 APAF1O14727 1248 aa10.65□□□□□ -0.7
CCDC65-203ENST00000547861 ATMINO43313 823 aaPredicted RBP10.65□□□□□ -0.7
CCDC65-203ENST00000547861 GLI3P10071 1580 aa10.65□□□□□ -0.7
CCDC65-203ENST00000547861 PIK3C2AO00443 1686 aa10.64□□□□□ -0.71
CCDC65-203ENST00000547861 SBNO1A3KN83 1393 aa10.64□□□□□ -0.71
CCDC65-203ENST00000547861 NUDT16Q96DE0 195 aaKnown RBP10.64□□□□□ -0.71
CCDC65-203ENST00000547861 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
CCDC65-203ENST00000547861 PEAK1Q9H792 1746 aa10.64□□□□□ -0.71
CCDC65-203ENST00000547861 DUSP27Q5VZP5 1158 aa10.64□□□□□ -0.71
CCDC65-203ENST00000547861 SLC39A7Q92504 469 aa10.64□□□□□ -0.71
CCDC65-203ENST00000547861 METRNQ9UJH8 293 aa10.64□□□□□ -0.71
CCDC65-203ENST00000547861 ANKARQ7Z5J8 1434 aa10.63□□□□□ -0.71
CCDC65-203ENST00000547861 ARHGEF10O15013 1369 aa10.63□□□□□ -0.71
CCDC65-203ENST00000547861 C7P10643 843 aa10.63□□□□□ -0.71
CCDC65-203ENST00000547861 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
CCDC65-203ENST00000547861 CCDC125Q86Z20 511 aa10.63□□□□□ -0.71
CCDC65-203ENST00000547861 NGEFQ8N5V2 710 aa10.63□□□□□ -0.71
CCDC65-203ENST00000547861 CCDC9Q9Y3X0 531 aaKnown RBP10.63□□□□□ -0.71
CCDC65-203ENST00000547861 PLCH1Q4KWH8 1693 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms