RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 ZNF428Q96B54 188 aa19.78■□□□□ 0.76
BRF1-212ENST00000547562 DEKP35659 375 aaKnown RBP19.77■□□□□ 0.76
BRF1-212ENST00000547562 DAXXQ9UER7 740 aaPredicted RBP19.77■□□□□ 0.76
BRF1-212ENST00000547562 TMEM57Q8N5G2 664 aa19.76■□□□□ 0.75
BRF1-212ENST00000547562 BRPF1P55201 1214 aaPredicted RBP19.76■□□□□ 0.75
BRF1-212ENST00000547562 HDAC1Q13547 482 aaPredicted RBP19.76■□□□□ 0.75
BRF1-212ENST00000547562 USP19O94966 1318 aa19.76■□□□□ 0.75
BRF1-212ENST00000547562 THUMPD2Q9BTF0 503 aaKnown RBP19.75■□□□□ 0.75
BRF1-212ENST00000547562 IFT57Q9NWB7 429 aa19.75■□□□□ 0.75
BRF1-212ENST00000547562 SLC4A3P48751 1232 aa19.75■□□□□ 0.75
BRF1-212ENST00000547562 GNAI1P63096 354 aa19.74■□□□□ 0.75
BRF1-212ENST00000547562 USP35Q9P2H5 1018 aa19.74■□□□□ 0.75
BRF1-212ENST00000547562 ACEP12821 1306 aa19.74■□□□□ 0.75
BRF1-212ENST00000547562 TTC21BQ7Z4L5 1316 aa19.74■□□□□ 0.75
BRF1-212ENST00000547562 PLEKHG3A1L390 1219 aa19.73■□□□□ 0.75
BRF1-212ENST00000547562 SEC24BO95487 1268 aa19.73■□□□□ 0.75
BRF1-212ENST00000547562 ZNF853P0CG23 659 aa19.73■□□□□ 0.75
BRF1-212ENST00000547562 CEBPAP49715 358 aaPredicted RBP19.73■□□□□ 0.75
BRF1-212ENST00000547562 LMOD3Q0VAK6 560 aa19.73■□□□□ 0.75
BRF1-212ENST00000547562 ZBTB40Q9NUA8 1239 aa19.73■□□□□ 0.75
BRF1-212ENST00000547562 NALCNQ8IZF0 1738 aa19.73■□□□□ 0.75
BRF1-212ENST00000547562 PTPRUQ92729 1446 aa19.73■□□□□ 0.75
BRF1-212ENST00000547562 SLIT1O75093 1534 aa19.72■□□□□ 0.75
BRF1-212ENST00000547562 VAMP4O75379 141 aa19.72■□□□□ 0.75
BRF1-212ENST00000547562 OVOS2A0A0J9YW53 1432 aa19.72■□□□□ 0.75
BRF1-212ENST00000547562 OVOS2Q6IE36 1432 aa19.72■□□□□ 0.75
BRF1-212ENST00000547562 EID1Q9Y6B2 187 aa19.72■□□□□ 0.75
BRF1-212ENST00000547562 USP6P35125 1406 aa19.72■□□□□ 0.75
BRF1-212ENST00000547562 ARHGAP23Q9P227 1491 aa19.71■□□□□ 0.75
BRF1-212ENST00000547562 SLC26A8Q96RN1 970 aa19.71■□□□□ 0.75
BRF1-212ENST00000547562 MBIPQ9NS73 344 aa19.71■□□□□ 0.75
BRF1-212ENST00000547562 CFAP44Q96MT7 982 aa19.7■□□□□ 0.74
BRF1-212ENST00000547562 FER1L4A9Z1Z3 1794 aa19.69■□□□□ 0.74
BRF1-212ENST00000547562 NUTM2FA1L443 756 aa19.69■□□□□ 0.74
BRF1-212ENST00000547562 TSPYL6Q8N831 410 aa19.69■□□□□ 0.74
BRF1-212ENST00000547562 SMC5Q8IY18 1101 aa19.68■□□□□ 0.74
BRF1-212ENST00000547562 MRPL50Q8N5N7 158 aaKnown RBP19.68■□□□□ 0.74
BRF1-212ENST00000547562 PTCH1Q13635 1447 aa19.68■□□□□ 0.74
BRF1-212ENST00000547562 EIF4A2Q14240 407 aaKnown RBP19.68■□□□□ 0.74
BRF1-212ENST00000547562 ARHGAP45Q92619 1136 aa19.68■□□□□ 0.74
BRF1-212ENST00000547562 PEAK1Q9H792 1746 aa19.68■□□□□ 0.74
BRF1-212ENST00000547562 SSH2Q76I76 1423 aa19.66■□□□□ 0.74
BRF1-212ENST00000547562 AMOTL2Q9Y2J4 779 aa19.66■□□□□ 0.74
BRF1-212ENST00000547562 PIK3R4Q99570 1358 aa19.66■□□□□ 0.74
BRF1-212ENST00000547562 FAM83GA6ND36 823 aa19.66■□□□□ 0.74
BRF1-212ENST00000547562 TBX22Q9Y458 520 aa19.66■□□□□ 0.74
BRF1-212ENST00000547562 USP31Q70CQ4 1352 aa19.66■□□□□ 0.74
BRF1-212ENST00000547562 RGPD1P0DJD0 1748 aa19.66■□□□□ 0.74
BRF1-212ENST00000547562 TWISTNBQ3B726 338 aaPredicted RBP19.65■□□□□ 0.74
BRF1-212ENST00000547562 AEBP1Q8IUX7 1158 aa19.65■□□□□ 0.74
BRF1-212ENST00000547562 UPF2Q9HAU5 1272 aaKnown RBP19.65■□□□□ 0.74
BRF1-212ENST00000547562 DIP2AQ14689 1571 aa19.65■□□□□ 0.74
BRF1-212ENST00000547562 SULT6B1Q6IMI4 303 aa19.64■□□□□ 0.74
BRF1-212ENST00000547562 RGPD8O14715 1765 aaPredicted RBP19.64■□□□□ 0.73
BRF1-212ENST00000547562 ELL2O00472 640 aaPredicted RBP19.64■□□□□ 0.73
BRF1-212ENST00000547562 C8orf58Q8NAV2 365 aa19.63■□□□□ 0.73
BRF1-212ENST00000547562 FMN2Q9NZ56 1722 aa19.63■□□□□ 0.73
BRF1-212ENST00000547562 DCTN1Q14203 1278 aa19.63■□□□□ 0.73
BRF1-212ENST00000547562 CHMP4BQ9H444 224 aaKnown RBP19.63■□□□□ 0.73
BRF1-212ENST00000547562 ZBTB7BO15156 539 aaPredicted RBP19.62■□□□□ 0.73
BRF1-212ENST00000547562 TBC1D32Q96NH3 1257 aa19.62■□□□□ 0.73
BRF1-212ENST00000547562 TTC21AQ8NDW8 1320 aa19.62■□□□□ 0.73
BRF1-212ENST00000547562 HSP90AB2PQ58FF8 381 aa19.62■□□□□ 0.73
BRF1-212ENST00000547562 ABCC4O15439 1325 aa19.62■□□□□ 0.73
BRF1-212ENST00000547562 RIMS1Q86UR5 1692 aaKnown RBP19.61■□□□□ 0.73
BRF1-212ENST00000547562 NFKBIBQ15653 356 aa19.61■□□□□ 0.73
BRF1-212ENST00000547562 THEMISQ8N1K5 641 aaPredicted RBP19.61■□□□□ 0.73
BRF1-212ENST00000547562 XRN1Q8IZH2 1706 aaKnown RBP19.6■□□□□ 0.73
BRF1-212ENST00000547562 NUCB1Q02818 461 aa19.6■□□□□ 0.73
BRF1-212ENST00000547562 PLPPR3Q6T4P5 718 aa19.6■□□□□ 0.73
BRF1-212ENST00000547562 BECN1Q14457 450 aa19.6■□□□□ 0.73
BRF1-212ENST00000547562 API5Q9BZZ5 524 aaKnown RBP19.57■□□□□ 0.72
BRF1-212ENST00000547562 ARHGEF10O15013 1369 aa19.56■□□□□ 0.72
BRF1-212ENST00000547562 MAP3K19Q56UN5 1328 aa19.56■□□□□ 0.72
BRF1-212ENST00000547562 SOX12O15370 315 aa19.56■□□□□ 0.72
BRF1-212ENST00000547562 PIK3C2AO00443 1686 aa19.56■□□□□ 0.72
BRF1-212ENST00000547562 NGDNQ8NEJ9 315 aaKnown RBP19.56■□□□□ 0.72
BRF1-212ENST00000547562 CHL1O00533 1208 aa19.55■□□□□ 0.72
BRF1-212ENST00000547562 CHD1LQ86WJ1 897 aa19.55■□□□□ 0.72
BRF1-212ENST00000547562 SBNO1A3KN83 1393 aa19.55■□□□□ 0.72
BRF1-212ENST00000547562 FLT4P35916 1363 aa19.55■□□□□ 0.72
BRF1-212ENST00000547562 MCM10Q7L590 875 aa19.54■□□□□ 0.72
BRF1-212ENST00000547562 GCC1Q96CN9 775 aa19.54■□□□□ 0.72
BRF1-212ENST00000547562 LNPKQ9C0E8 428 aa19.54■□□□□ 0.72
BRF1-212ENST00000547562 C1orf115Q9H7X2 142 aa19.54■□□□□ 0.72
BRF1-212ENST00000547562 HAP1P54257 671 aaPredicted RBP19.54■□□□□ 0.72
BRF1-212ENST00000547562 KIF24Q5T7B8 1368 aa19.53■□□□□ 0.72
BRF1-212ENST00000547562 KIAA0232Q92628 1395 aa19.53■□□□□ 0.72
BRF1-212ENST00000547562 ANKARQ7Z5J8 1434 aa19.53■□□□□ 0.72
BRF1-212ENST00000547562 CRB1P82279 1406 aa19.51■□□□□ 0.71
BRF1-212ENST00000547562 SIRT2Q8IXJ6 389 aa19.51■□□□□ 0.71
BRF1-212ENST00000547562 KDRP35968 1356 aa19.51■□□□□ 0.71
BRF1-212ENST00000547562 C22orf23Q9BZE7 217 aa19.51■□□□□ 0.71
BRF1-212ENST00000547562 MFAP1P55081 439 aaKnown RBP19.5■□□□□ 0.71
BRF1-212ENST00000547562 KRT24Q2M2I5 525 aa19.5■□□□□ 0.71
BRF1-212ENST00000547562 CEP170BQ9Y4F5 1589 aaPredicted RBP19.5■□□□□ 0.71
BRF1-212ENST00000547562 MARF1Q9Y4F3 1742 aaKnown RBP19.5■□□□□ 0.71
BRF1-212ENST00000547562 KCNA6P17658 529 aa19.5■□□□□ 0.71
BRF1-212ENST00000547562 ANKRD45Q5TZF3 282 aa19.5■□□□□ 0.71
BRF1-212ENST00000547562 AMPHP49418 695 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms