RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 ABCA3Q99758 1704 aa21.96■■□□□ 1.11
LETMD1-210ENST00000547555 CDCA7LQ96GN5 454 aa21.96■■□□□ 1.11
LETMD1-210ENST00000547555 PNPLA6Q8IY17 1366 aa21.96■■□□□ 1.11
LETMD1-210ENST00000547555 ANO8Q9HCE9 1232 aaPredicted RBP21.95■■□□□ 1.1
LETMD1-210ENST00000547555 USP31Q70CQ4 1352 aa21.95■■□□□ 1.1
LETMD1-210ENST00000547555 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.95■■□□□ 1.1
LETMD1-210ENST00000547555 TRMT2AQ8IZ69 625 aaKnown RBP21.95■■□□□ 1.1
LETMD1-210ENST00000547555 FAM43AQ8N2R8 423 aa21.95■■□□□ 1.1
LETMD1-210ENST00000547555 OVOS2A0A0J9YW53 1432 aa21.94■■□□□ 1.1
LETMD1-210ENST00000547555 OVOS2Q6IE36 1432 aa21.94■■□□□ 1.1
LETMD1-210ENST00000547555 PHRF1Q9P1Y6 1649 aaKnown RBP21.94■■□□□ 1.1
LETMD1-210ENST00000547555 GOLGA2Q08379 1002 aa21.94■■□□□ 1.1
LETMD1-210ENST00000547555 C8orf34Q49A92 452 aa21.94■■□□□ 1.1
LETMD1-210ENST00000547555 DUSP27Q5VZP5 1158 aa21.94■■□□□ 1.1
LETMD1-210ENST00000547555 CGNL1Q0VF96 1302 aa21.94■■□□□ 1.1
LETMD1-210ENST00000547555 JCADQ9P266 1359 aa21.93■■□□□ 1.1
LETMD1-210ENST00000547555 NME9Q86XW9 330 aa21.93■■□□□ 1.1
LETMD1-210ENST00000547555 NSD2O96028 1365 aa21.92■■□□□ 1.1
LETMD1-210ENST00000547555 ABTB2Q8N961 1025 aa21.92■■□□□ 1.1
LETMD1-210ENST00000547555 RSPH6AQ9H0K4 717 aa21.92■■□□□ 1.1
LETMD1-210ENST00000547555 KNSTRNQ9Y448 316 aa21.92■■□□□ 1.1
LETMD1-210ENST00000547555 SALL2Q9Y467 1007 aaPredicted RBP21.92■■□□□ 1.1
LETMD1-210ENST00000547555 SLIT3O75094 1523 aa21.92■■□□□ 1.1
LETMD1-210ENST00000547555 FYB1O15117 783 aa21.91■■□□□ 1.1
LETMD1-210ENST00000547555 AMER1Q5JTC6 1135 aaPredicted RBP21.91■■□□□ 1.1
LETMD1-210ENST00000547555 USP19O94966 1318 aa21.91■■□□□ 1.1
LETMD1-210ENST00000547555 MAPK8IP3Q9UPT6 1336 aa21.91■■□□□ 1.1
LETMD1-210ENST00000547555 WDR43Q15061 677 aaKnown RBP eCLIP21.88■■□□□ 1.09
LETMD1-210ENST00000547555 LMOD2Q6P5Q4 547 aa21.88■■□□□ 1.09
LETMD1-210ENST00000547555 NLRP6P59044 892 aa21.88■■□□□ 1.09
LETMD1-210ENST00000547555 ZRANB1Q9UGI0 708 aa21.88■■□□□ 1.09
LETMD1-210ENST00000547555 SLFN5Q08AF3 891 aa21.87■■□□□ 1.09
LETMD1-210ENST00000547555 PDE3AQ14432 1141 aa21.87■■□□□ 1.09
LETMD1-210ENST00000547555 BECN1Q14457 450 aa21.87■■□□□ 1.09
LETMD1-210ENST00000547555 NUTM2GQ5VZR2 741 aa21.86■■□□□ 1.09
LETMD1-210ENST00000547555 GGNBP2Q9H3C7 697 aa21.86■■□□□ 1.09
LETMD1-210ENST00000547555 NFAT5O94916 1531 aa21.85■■□□□ 1.09
LETMD1-210ENST00000547555 CNGB1Q14028 1251 aaPredicted RBP21.85■■□□□ 1.09
LETMD1-210ENST00000547555 FRAT1Q92837 279 aaPredicted RBP21.85■■□□□ 1.09
LETMD1-210ENST00000547555 SPATA31A6Q5VVP1 1343 aa21.84■■□□□ 1.09
LETMD1-210ENST00000547555 PLIN1O60240 522 aa21.84■■□□□ 1.09
LETMD1-210ENST00000547555 COG3Q96JB2 828 aa21.84■■□□□ 1.09
LETMD1-210ENST00000547555 ADAMTS8Q9UP79 889 aa21.84■■□□□ 1.09
LETMD1-210ENST00000547555 PPP2R1AP30153 589 aa21.83■■□□□ 1.09
LETMD1-210ENST00000547555 NCBP3Q53F19 620 aaKnown RBP21.83■■□□□ 1.09
LETMD1-210ENST00000547555 L1TD1Q5T7N2 865 aaKnown RBP21.83■■□□□ 1.09
LETMD1-210ENST00000547555 E9PSI1 815 aa21.82■■□□□ 1.08
LETMD1-210ENST00000547555 UBE2Q2Q8WVN8 375 aa21.82■■□□□ 1.08
LETMD1-210ENST00000547555 CC2D1BQ5T0F9 858 aaKnown RBP21.81■■□□□ 1.08
LETMD1-210ENST00000547555 CABLES1Q8TDN4 633 aa21.81■■□□□ 1.08
LETMD1-210ENST00000547555 LTN1O94822 1766 aa21.8■■□□□ 1.08
LETMD1-210ENST00000547555 LRP6O75581 1613 aa21.8■■□□□ 1.08
LETMD1-210ENST00000547555 GCP02774 474 aa21.79■■□□□ 1.08
LETMD1-210ENST00000547555 ILDR1Q86SU0 546 aaPredicted RBP21.79■■□□□ 1.08
LETMD1-210ENST00000547555 KCNH5Q8NCM2 988 aa21.79■■□□□ 1.08
LETMD1-210ENST00000547555 MAP2P11137 1827 aaKnown RBP21.78■■□□□ 1.08
LETMD1-210ENST00000547555 CPDO75976 1380 aa21.78■■□□□ 1.08
LETMD1-210ENST00000547555 AATKQ6ZMQ8 1374 aa21.78■■□□□ 1.08
LETMD1-210ENST00000547555 C20orf194Q5TEA3 1177 aa21.75■■□□□ 1.07
LETMD1-210ENST00000547555 MORC1Q86VD1 984 aa21.75■■□□□ 1.07
LETMD1-210ENST00000547555 BRPF3Q9ULD4 1205 aa21.75■■□□□ 1.07
LETMD1-210ENST00000547555 ABCC6O95255 1503 aa21.75■■□□□ 1.07
LETMD1-210ENST00000547555 COL18A1P39060 1754 aa21.75■■□□□ 1.07
LETMD1-210ENST00000547555 PLEKHG5O94827 1062 aa21.75■■□□□ 1.07
LETMD1-210ENST00000547555 COL14A1Q05707 1796 aaKnown RBP21.74■■□□□ 1.07
LETMD1-210ENST00000547555 LMO7Q8WWI1 1683 aa21.74■■□□□ 1.07
LETMD1-210ENST00000547555 HAP1P54257 671 aaPredicted RBP21.73■■□□□ 1.07
LETMD1-210ENST00000547555 KIAA0232Q92628 1395 aa21.73■■□□□ 1.07
LETMD1-210ENST00000547555 ARHGEF25Q86VW2 580 aa21.72■■□□□ 1.07
LETMD1-210ENST00000547555 PEAK1Q9H792 1746 aa21.72■■□□□ 1.07
LETMD1-210ENST00000547555 NUTM2BA6NNL0 878 aaPredicted RBP21.72■■□□□ 1.07
LETMD1-210ENST00000547555 NUTM2EB1AL46 878 aaPredicted RBP21.72■■□□□ 1.07
LETMD1-210ENST00000547555 NUTM2AQ8IVF1 878 aaPredicted RBP21.72■■□□□ 1.07
LETMD1-210ENST00000547555 PLCH1Q4KWH8 1693 aa21.72■■□□□ 1.07
LETMD1-210ENST00000547555 SOX12O15370 315 aa21.71■■□□□ 1.07
LETMD1-210ENST00000547555 FRAT2O75474 233 aaPredicted RBP21.7■■□□□ 1.06
LETMD1-210ENST00000547555 FBLN1P23142 703 aa21.7■■□□□ 1.06
LETMD1-210ENST00000547555 UPF2Q9HAU5 1272 aaKnown RBP21.7■■□□□ 1.06
LETMD1-210ENST00000547555 ISY1Q9ULR0 285 aaKnown RBP21.7■■□□□ 1.06
LETMD1-210ENST00000547555 NWD2Q9ULI1 1742 aa21.7■■□□□ 1.06
LETMD1-210ENST00000547555 KIF24Q5T7B8 1368 aa21.7■■□□□ 1.06
LETMD1-210ENST00000547555 MAP3K19Q56UN5 1328 aa21.7■■□□□ 1.06
LETMD1-210ENST00000547555 ZC3H6P61129 1189 aaKnown RBP21.69■■□□□ 1.06
LETMD1-210ENST00000547555 RTN4Q9NQC3 1192 aaKnown RBP21.69■■□□□ 1.06
LETMD1-210ENST00000547555 RGPD5Q99666 1765 aa21.69■■□□□ 1.06
LETMD1-210ENST00000547555 RTL1A6NKG5 1358 aa21.69■■□□□ 1.06
LETMD1-210ENST00000547555 TNNT2P45379 298 aaPredicted RBP21.68■■□□□ 1.06
LETMD1-210ENST00000547555 ADAMTS2O95450 1211 aa21.67■■□□□ 1.06
LETMD1-210ENST00000547555 RRS1Q15050 365 aaKnown RBP21.67■■□□□ 1.06
LETMD1-210ENST00000547555 PRDM11Q9NQV5 511 aa21.67■■□□□ 1.06
LETMD1-210ENST00000547555 POLKQ9UBT6 870 aa21.67■■□□□ 1.06
LETMD1-210ENST00000547555 NRAPQ86VF7 1730 aa21.67■■□□□ 1.06
LETMD1-210ENST00000547555 CLUAP1Q96AJ1 413 aa21.66■■□□□ 1.06
LETMD1-210ENST00000547555 CDK12Q9NYV4 1490 aaPredicted RBP21.66■■□□□ 1.06
LETMD1-210ENST00000547555 SLIT2O94813 1529 aa21.66■■□□□ 1.06
LETMD1-210ENST00000547555 FAM83GA6ND36 823 aa21.66■■□□□ 1.06
LETMD1-210ENST00000547555 CAMTA1Q9Y6Y1 1673 aa21.65■■□□□ 1.06
LETMD1-210ENST00000547555 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.65■■□□□ 1.06
LETMD1-210ENST00000547555 SENP3-EIF4A1A0A087X0R7 540 aa21.65■■□□□ 1.06
LETMD1-210ENST00000547555 EMILIN1Q9Y6C2 1016 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms