RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 KIF24Q5T7B8 1368 aa19.76■□□□□ 0.75
CALCOCO1-203ENST00000546443 PDE3AQ14432 1141 aa19.76■□□□□ 0.75
CALCOCO1-203ENST00000546443 TSR2Q969E8 191 aaKnown RBP19.76■□□□□ 0.75
CALCOCO1-203ENST00000546443 KIF1AQ12756 1690 aa19.75■□□□□ 0.75
CALCOCO1-203ENST00000546443 ARHGEF10O15013 1369 aa19.75■□□□□ 0.75
CALCOCO1-203ENST00000546443 PROSER2Q86WR7 435 aaPredicted RBP19.75■□□□□ 0.75
CALCOCO1-203ENST00000546443 EXOSC9Q06265 439 aaKnown RBP19.74■□□□□ 0.75
CALCOCO1-203ENST00000546443 TRPM3Q9HCF6 1732 aaPredicted RBP19.74■□□□□ 0.75
CALCOCO1-203ENST00000546443 LTN1O94822 1766 aa19.73■□□□□ 0.75
CALCOCO1-203ENST00000546443 SOX12O15370 315 aa19.73■□□□□ 0.75
CALCOCO1-203ENST00000546443 ESCO1Q5FWF5 840 aa19.73■□□□□ 0.75
CALCOCO1-203ENST00000546443 AEBP1Q8IUX7 1158 aa19.73■□□□□ 0.75
CALCOCO1-203ENST00000546443 ABTB2Q8N961 1025 aa19.73■□□□□ 0.75
CALCOCO1-203ENST00000546443 NFAT5O94916 1531 aa19.73■□□□□ 0.75
CALCOCO1-203ENST00000546443 SULT6B1Q6IMI4 303 aa19.72■□□□□ 0.75
CALCOCO1-203ENST00000546443 C14orf37Q86TY3 774 aa19.71■□□□□ 0.75
CALCOCO1-203ENST00000546443 NCOA3Q9Y6Q9 1424 aa19.71■□□□□ 0.75
CALCOCO1-203ENST00000546443 CALD1Q05682 793 aaKnown RBP19.71■□□□□ 0.75
CALCOCO1-203ENST00000546443 LMOD3Q0VAK6 560 aa19.71■□□□□ 0.75
CALCOCO1-203ENST00000546443 PHRF1Q9P1Y6 1649 aaKnown RBP19.71■□□□□ 0.75
CALCOCO1-203ENST00000546443 C1orf167Q5SNV9 1468 aa19.7■□□□□ 0.74
CALCOCO1-203ENST00000546443 PAK3O75914 559 aaPredicted RBP19.7■□□□□ 0.74
CALCOCO1-203ENST00000546443 ZNF853P0CG23 659 aa19.7■□□□□ 0.74
CALCOCO1-203ENST00000546443 AMPHP49418 695 aa19.7■□□□□ 0.74
CALCOCO1-203ENST00000546443 NUTM2GQ5VZR2 741 aa19.7■□□□□ 0.74
CALCOCO1-203ENST00000546443 KDRP35968 1356 aa19.69■□□□□ 0.74
CALCOCO1-203ENST00000546443 ORAI2Q96SN7 254 aa19.69■□□□□ 0.74
CALCOCO1-203ENST00000546443 IGSF1Q8N6C5 1336 aa19.69■□□□□ 0.74
CALCOCO1-203ENST00000546443 RTL1A6NKG5 1358 aa19.68■□□□□ 0.74
CALCOCO1-203ENST00000546443 HOXC9P31274 260 aa19.68■□□□□ 0.74
CALCOCO1-203ENST00000546443 PSME1Q06323 249 aa19.68■□□□□ 0.74
CALCOCO1-203ENST00000546443 C19orf44Q9H6X5 657 aa19.68■□□□□ 0.74
CALCOCO1-203ENST00000546443 IFT57Q9NWB7 429 aa19.68■□□□□ 0.74
CALCOCO1-203ENST00000546443 KDM2BQ8NHM5 1336 aa19.68■□□□□ 0.74
CALCOCO1-203ENST00000546443 STRCQ7RTU9 1775 aa19.67■□□□□ 0.74
CALCOCO1-203ENST00000546443 DCCP43146 1447 aa19.67■□□□□ 0.74
CALCOCO1-203ENST00000546443 KDM4FA0A1W2PPD8 638 aa19.67■□□□□ 0.74
CALCOCO1-203ENST00000546443 THUMPD2Q9BTF0 503 aaKnown RBP19.67■□□□□ 0.74
CALCOCO1-203ENST00000546443 RBM19Q9Y4C8 960 aaKnown RBP19.67■□□□□ 0.74
CALCOCO1-203ENST00000546443 SLIT3O75094 1523 aa19.67■□□□□ 0.74
CALCOCO1-203ENST00000546443 LMTK3Q96Q04 1460 aa19.66■□□□□ 0.74
CALCOCO1-203ENST00000546443 EYA1Q99502 592 aa19.66■□□□□ 0.74
CALCOCO1-203ENST00000546443 CANXP27824 592 aaKnown RBP19.66■□□□□ 0.74
CALCOCO1-203ENST00000546443 GNAI1P63096 354 aa19.66■□□□□ 0.74
CALCOCO1-203ENST00000546443 PANK1Q8TE04 598 aa19.66■□□□□ 0.74
CALCOCO1-203ENST00000546443 FRAT1Q92837 279 aaPredicted RBP19.66■□□□□ 0.74
CALCOCO1-203ENST00000546443 BCL2L13Q9BXK5 485 aa19.66■□□□□ 0.74
CALCOCO1-203ENST00000546443 XIRP1Q702N8 1843 aaKnown RBP19.66■□□□□ 0.74
CALCOCO1-203ENST00000546443 TMEM94Q12767 1356 aa19.65■□□□□ 0.74
CALCOCO1-203ENST00000546443 MST1RQ04912 1400 aa19.65■□□□□ 0.74
CALCOCO1-203ENST00000546443 HSPA2P54652 639 aa19.65■□□□□ 0.74
CALCOCO1-203ENST00000546443 TNNQ9UQP3 1299 aa19.65■□□□□ 0.74
CALCOCO1-203ENST00000546443 ALS2Q96Q42 1657 aa19.64■□□□□ 0.73
CALCOCO1-203ENST00000546443 SSH1Q8WYL5 1049 aa19.64■□□□□ 0.73
CALCOCO1-203ENST00000546443 FAM83GA6ND36 823 aa19.62■□□□□ 0.73
CALCOCO1-203ENST00000546443 FOXO3O43524 673 aa19.62■□□□□ 0.73
CALCOCO1-203ENST00000546443 RLBP1P12271 317 aa19.62■□□□□ 0.73
CALCOCO1-203ENST00000546443 ALDH1L2Q3SY69 923 aa19.62■□□□□ 0.73
CALCOCO1-203ENST00000546443 CFAP44Q96MT7 982 aa19.62■□□□□ 0.73
CALCOCO1-203ENST00000546443 COG6Q9Y2V7 657 aa19.62■□□□□ 0.73
CALCOCO1-203ENST00000546443 ZKSCAN2Q63HK3 967 aa19.61■□□□□ 0.73
CALCOCO1-203ENST00000546443 CENPQQ7L2Z9 268 aaPredicted RBP19.61■□□□□ 0.73
CALCOCO1-203ENST00000546443 KCNH5Q8NCM2 988 aa19.61■□□□□ 0.73
CALCOCO1-203ENST00000546443 IP6K1Q92551 441 aa19.61■□□□□ 0.73
CALCOCO1-203ENST00000546443 ZNF428Q96B54 188 aa19.61■□□□□ 0.73
CALCOCO1-203ENST00000546443 MBIPQ9NS73 344 aa19.61■□□□□ 0.73
CALCOCO1-203ENST00000546443 SMC4Q9NTJ3 1288 aa19.61■□□□□ 0.73
CALCOCO1-203ENST00000546443 LAS1LQ9Y4W2 734 aaKnown RBP19.61■□□□□ 0.73
CALCOCO1-203ENST00000546443 BRPF1P55201 1214 aaPredicted RBP19.61■□□□□ 0.73
CALCOCO1-203ENST00000546443 AAMPQ13685 434 aa19.61■□□□□ 0.73
CALCOCO1-203ENST00000546443 USP19O94966 1318 aa19.6■□□□□ 0.73
CALCOCO1-203ENST00000546443 DCTN1Q14203 1278 aa19.6■□□□□ 0.73
CALCOCO1-203ENST00000546443 KRT28Q7Z3Y7 464 aa19.6■□□□□ 0.73
CALCOCO1-203ENST00000546443 VAMP4O75379 141 aa19.59■□□□□ 0.73
CALCOCO1-203ENST00000546443 LRRC37A3O60309 1634 aa19.59■□□□□ 0.73
CALCOCO1-203ENST00000546443 CRB1P82279 1406 aa19.58■□□□□ 0.73
CALCOCO1-203ENST00000546443 MS4A1P11836 297 aa19.58■□□□□ 0.73
CALCOCO1-203ENST00000546443 MTHFSDQ2M296 383 aaKnown RBP19.58■□□□□ 0.73
CALCOCO1-203ENST00000546443 CLUAP1Q96AJ1 413 aa19.58■□□□□ 0.73
CALCOCO1-203ENST00000546443 TCERG1O14776 1098 aaKnown RBP19.57■□□□□ 0.72
CALCOCO1-203ENST00000546443 ATF3P18847 181 aa19.57■□□□□ 0.72
CALCOCO1-203ENST00000546443 XPCQ01831 940 aaPredicted RBP19.57■□□□□ 0.72
CALCOCO1-203ENST00000546443 DZIP1LQ8IYY4 767 aaKnown RBP19.57■□□□□ 0.72
CALCOCO1-203ENST00000546443 RGPD2P0DJD1 1756 aa19.57■□□□□ 0.72
CALCOCO1-203ENST00000546443 TSPYL6Q8N831 410 aa19.56■□□□□ 0.72
CALCOCO1-203ENST00000546443 KIF16BQ96L93 1317 aa19.56■□□□□ 0.72
CALCOCO1-203ENST00000546443 MVPQ14764 893 aaKnown RBP19.56■□□□□ 0.72
CALCOCO1-203ENST00000546443 ATF7IPQ6VMQ6 1270 aa19.56■□□□□ 0.72
CALCOCO1-203ENST00000546443 GAS2L2Q8NHY3 880 aa19.56■□□□□ 0.72
CALCOCO1-203ENST00000546443 NOB1Q9ULX3 412 aaKnown RBP19.56■□□□□ 0.72
CALCOCO1-203ENST00000546443 CAMTA1Q9Y6Y1 1673 aa19.55■□□□□ 0.72
CALCOCO1-203ENST00000546443 CHL1O00533 1208 aa19.55■□□□□ 0.72
CALCOCO1-203ENST00000546443 GCP02774 474 aa19.55■□□□□ 0.72
CALCOCO1-203ENST00000546443 TRIM27P14373 513 aa19.55■□□□□ 0.72
CALCOCO1-203ENST00000546443 MED1Q15648 1581 aaPredicted RBP19.54■□□□□ 0.72
CALCOCO1-203ENST00000546443 MCM10Q7L590 875 aa19.54■□□□□ 0.72
CALCOCO1-203ENST00000546443 ARHGEF25Q86VW2 580 aa19.54■□□□□ 0.72
CALCOCO1-203ENST00000546443 MRPL50Q8N5N7 158 aaKnown RBP19.54■□□□□ 0.72
CALCOCO1-203ENST00000546443 C8orf58Q8NAV2 365 aa19.54■□□□□ 0.72
CALCOCO1-203ENST00000546443 NCAPD2Q15021 1401 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms