RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 TBC1D2Q9BYX2 928 aa9.81□□□□□ -0.84
UBR1-202ENST00000546274 NCBP3Q53F19 620 aaKnown RBP9.81□□□□□ -0.84
UBR1-202ENST00000546274 PUS7Q96PZ0 661 aaKnown RBP9.81□□□□□ -0.84
UBR1-202ENST00000546274 GGT6Q6P531 493 aa9.8□□□□□ -0.84
UBR1-202ENST00000546274 KIF20BQ96Q89 1820 aa9.8□□□□□ -0.84
UBR1-202ENST00000546274 CD163L1Q9NR16 1453 aa9.8□□□□□ -0.84
UBR1-202ENST00000546274 SPDYE4A6NLX3 237 aa9.8□□□□□ -0.84
UBR1-202ENST00000546274 IRX3P78415 501 aaPredicted RBP9.8□□□□□ -0.84
UBR1-202ENST00000546274 TEX2Q8IWB9 1127 aa9.8□□□□□ -0.84
UBR1-202ENST00000546274 TMEM131LA2VDJ0 1609 aa9.8□□□□□ -0.84
UBR1-202ENST00000546274 ABCC11Q96J66 1382 aa9.8□□□□□ -0.84
UBR1-202ENST00000546274 NASPP49321 788 aaPredicted RBP9.79□□□□□ -0.84
UBR1-202ENST00000546274 CCDC173Q0VFZ6 552 aa9.79□□□□□ -0.84
UBR1-202ENST00000546274 ESF1Q9H501 851 aaKnown RBP9.79□□□□□ -0.84
UBR1-202ENST00000546274 PREX1Q8TCU6 1659 aa9.79□□□□□ -0.84
UBR1-202ENST00000546274 A0A1W2PP64 1363 aa9.79□□□□□ -0.84
UBR1-202ENST00000546274 PMFBP1Q8TBY8 1022 aa9.79□□□□□ -0.84
UBR1-202ENST00000546274 PLEKHF1Q96S99 279 aa9.79□□□□□ -0.84
UBR1-202ENST00000546274 EVC2Q86UK5 1308 aa9.79□□□□□ -0.84
UBR1-202ENST00000546274 NUTM2DQ5VT03 806 aaPredicted RBP9.79□□□□□ -0.84
UBR1-202ENST00000546274 ZBTB9Q96C00 473 aa9.78□□□□□ -0.84
UBR1-202ENST00000546274 CABP2Q9NPB3 220 aa9.78□□□□□ -0.84
UBR1-202ENST00000546274 PDZRN3Q9UPQ7 1066 aa9.78□□□□□ -0.84
UBR1-202ENST00000546274 ZNF771Q7L3S4 317 aaPredicted RBP9.78□□□□□ -0.84
UBR1-202ENST00000546274 CFAP53Q96M91 514 aa9.78□□□□□ -0.84
UBR1-202ENST00000546274 ZFYVE9O95405 1425 aa9.77□□□□□ -0.84
UBR1-202ENST00000546274 ARHGAP31Q2M1Z3 1444 aa9.77□□□□□ -0.84
UBR1-202ENST00000546274 KCNJ4P48050 445 aa9.77□□□□□ -0.84
UBR1-202ENST00000546274 MVPQ14764 893 aaKnown RBP9.77□□□□□ -0.84
UBR1-202ENST00000546274 C3P01024 1663 aa9.77□□□□□ -0.85
UBR1-202ENST00000546274 FAM177BA6PVY3 158 aa9.77□□□□□ -0.85
UBR1-202ENST00000546274 UPF2Q9HAU5 1272 aaKnown RBP9.77□□□□□ -0.85
UBR1-202ENST00000546274 MED14O60244 1454 aa9.77□□□□□ -0.85
UBR1-202ENST00000546274 U2AF1L5P0DN76 240 aaPredicted RBP9.77□□□□□ -0.85
UBR1-202ENST00000546274 U2AF1Q01081 240 aaKnown RBP eCLIP9.77□□□□□ -0.85
UBR1-202ENST00000546274 TBC1D32Q96NH3 1257 aa9.77□□□□□ -0.85
UBR1-202ENST00000546274 CHMP5Q9NZZ3 219 aa9.77□□□□□ -0.85
UBR1-202ENST00000546274 ATP2B3Q16720 1220 aa9.76□□□□□ -0.85
UBR1-202ENST00000546274 TSR2Q969E8 191 aaKnown RBP9.76□□□□□ -0.85
UBR1-202ENST00000546274 ISY1Q9ULR0 285 aaKnown RBP9.76□□□□□ -0.85
UBR1-202ENST00000546274 TRIM35Q9UPQ4 493 aa9.76□□□□□ -0.85
UBR1-202ENST00000546274 DDX11L8A8MPP1 907 aa9.76□□□□□ -0.85
UBR1-202ENST00000546274 CDC42BPGQ6DT37 1551 aa9.76□□□□□ -0.85
UBR1-202ENST00000546274 VGFO15240 615 aaPredicted RBP9.75□□□□□ -0.85
UBR1-202ENST00000546274 IRX5P78411 483 aaPredicted RBP9.75□□□□□ -0.85
UBR1-202ENST00000546274 MLECQ14165 292 aa9.75□□□□□ -0.85
UBR1-202ENST00000546274 RGS22Q8NE09 1264 aa9.75□□□□□ -0.85
UBR1-202ENST00000546274 SASS6Q6UVJ0 657 aa9.75□□□□□ -0.85
UBR1-202ENST00000546274 CHMP4CQ96CF2 233 aa9.75□□□□□ -0.85
UBR1-202ENST00000546274 ZKSCAN2Q63HK3 967 aa9.74□□□□□ -0.85
UBR1-202ENST00000546274 RWDD1Q9H446 243 aaPredicted RBP9.74□□□□□ -0.85
UBR1-202ENST00000546274 SETD1BQ9UPS6 1966 aaKnown RBP9.74□□□□□ -0.85
UBR1-202ENST00000546274 TRIM27P14373 513 aa9.74□□□□□ -0.85
UBR1-202ENST00000546274 TAF3Q5VWG9 929 aa9.74□□□□□ -0.85
UBR1-202ENST00000546274 PPP1R9BQ96SB3 815 aa9.74□□□□□ -0.85
UBR1-202ENST00000546274 LRRC7Q96NW7 1537 aa9.74□□□□□ -0.85
UBR1-202ENST00000546274 CT47B1P0C2W7 299 aaPredicted RBP9.74□□□□□ -0.85
UBR1-202ENST00000546274 TMPOP42166 694 aaKnown RBP9.74□□□□□ -0.85
UBR1-202ENST00000546274 EXOSC9Q06265 439 aaKnown RBP9.74□□□□□ -0.85
UBR1-202ENST00000546274 IDI1Q13907 227 aa9.74□□□□□ -0.85
UBR1-202ENST00000546274 SAFB2Q14151 953 aaKnown RBP eCLIP9.74□□□□□ -0.85
UBR1-202ENST00000546274 DZIP1LQ8IYY4 767 aaKnown RBP9.74□□□□□ -0.85
UBR1-202ENST00000546274 SETD1AO15047 1707 aaKnown RBP9.74□□□□□ -0.85
UBR1-202ENST00000546274 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.73□□□□□ -0.85
UBR1-202ENST00000546274 HAP1P54257 671 aaPredicted RBP9.73□□□□□ -0.85
UBR1-202ENST00000546274 GGNBP2Q9H3C7 697 aa9.73□□□□□ -0.85
UBR1-202ENST00000546274 PNPLA6Q8IY17 1366 aa9.73□□□□□ -0.85
UBR1-202ENST00000546274 FYB1O15117 783 aa9.73□□□□□ -0.85
UBR1-202ENST00000546274 SSH1Q8WYL5 1049 aa9.73□□□□□ -0.85
UBR1-202ENST00000546274 MAP2P11137 1827 aaKnown RBP9.73□□□□□ -0.85
UBR1-202ENST00000546274 ALKQ9UM73 1620 aa9.72□□□□□ -0.85
UBR1-202ENST00000546274 HDAC1Q13547 482 aaPredicted RBP9.72□□□□□ -0.85
UBR1-202ENST00000546274 YTHDC2Q9H6S0 1430 aaKnown RBP9.72□□□□□ -0.85
UBR1-202ENST00000546274 CSPP1Q1MSJ5 1256 aa9.71□□□□□ -0.85
UBR1-202ENST00000546274 SMC4Q9NTJ3 1288 aa9.71□□□□□ -0.85
UBR1-202ENST00000546274 IL16Q14005 1332 aa9.71□□□□□ -0.85
UBR1-202ENST00000546274 ZNF142P52746 1687 aaPredicted RBP9.71□□□□□ -0.85
UBR1-202ENST00000546274 DLG5Q8TDM6 1919 aa9.71□□□□□ -0.86
UBR1-202ENST00000546274 NOL7Q9UMY1 257 aaKnown RBP9.71□□□□□ -0.86
UBR1-202ENST00000546274 U2SURPO15042 1029 aaKnown RBP9.71□□□□□ -0.86
UBR1-202ENST00000546274 ZNF500O60304 480 aaPredicted RBP9.71□□□□□ -0.86
UBR1-202ENST00000546274 CHRM1P11229 460 aaPredicted RBP9.71□□□□□ -0.86
UBR1-202ENST00000546274 ATF7IPQ6VMQ6 1270 aa9.71□□□□□ -0.86
UBR1-202ENST00000546274 STK26Q9P289 416 aa9.71□□□□□ -0.86
UBR1-202ENST00000546274 ATAD2Q6PL18 1390 aa9.7□□□□□ -0.86
UBR1-202ENST00000546274 SRPK2P78362 688 aaKnown RBP9.7□□□□□ -0.86
UBR1-202ENST00000546274 ZNF710Q8N1W2 664 aa9.7□□□□□ -0.86
UBR1-202ENST00000546274 NOB1Q9ULX3 412 aaKnown RBP9.7□□□□□ -0.86
UBR1-202ENST00000546274 TRERF1Q96PN7 1200 aa9.7□□□□□ -0.86
UBR1-202ENST00000546274 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.7□□□□□ -0.86
UBR1-202ENST00000546274 SMC5Q8IY18 1101 aa9.69□□□□□ -0.86
UBR1-202ENST00000546274 FAM135BQ49AJ0 1406 aa9.69□□□□□ -0.86
UBR1-202ENST00000546274 PRAM1Q96QH2 718 aa9.69□□□□□ -0.86
UBR1-202ENST00000546274 FOXD4L1Q9NU39 408 aa9.69□□□□□ -0.86
UBR1-202ENST00000546274 ZBTB40Q9NUA8 1239 aa9.69□□□□□ -0.86
UBR1-202ENST00000546274 DDX19BQ9UMR2 479 aa9.69□□□□□ -0.86
UBR1-202ENST00000546274 MINK1Q8N4C8 1332 aaPredicted RBP9.69□□□□□ -0.86
UBR1-202ENST00000546274 LMTK3Q96Q04 1460 aa9.69□□□□□ -0.86
UBR1-202ENST00000546274 TRIM6-TRIM34B2RNG4 842 aa9.69□□□□□ -0.86
UBR1-202ENST00000546274 TMEM57Q8N5G2 664 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms