RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 RBSNQ9H1K0 784 aa20.49■□□□□ 0.87
CLPTM1-203ENST00000546079 SMC4Q9NTJ3 1288 aa20.49■□□□□ 0.87
CLPTM1-203ENST00000546079 SASS6Q6UVJ0 657 aa20.48■□□□□ 0.87
CLPTM1-203ENST00000546079 CHD1LQ86WJ1 897 aa20.48■□□□□ 0.87
CLPTM1-203ENST00000546079 MORC1Q86VD1 984 aa20.48■□□□□ 0.87
CLPTM1-203ENST00000546079 UTP14CQ5TAP6 766 aaKnown RBP20.47■□□□□ 0.87
CLPTM1-203ENST00000546079 FBXO31Q5XUX0 539 aaPredicted RBP20.47■□□□□ 0.87
CLPTM1-203ENST00000546079 CLTCQ00610 1675 aaKnown RBP20.47■□□□□ 0.87
CLPTM1-203ENST00000546079 CAVIN1Q6NZI2 390 aaKnown RBP20.47■□□□□ 0.87
CLPTM1-203ENST00000546079 LNPKQ9C0E8 428 aa20.47■□□□□ 0.87
CLPTM1-203ENST00000546079 ARHGEF40Q8TER5 1519 aa20.46■□□□□ 0.87
CLPTM1-203ENST00000546079 NUCB2P80303 420 aa20.46■□□□□ 0.87
CLPTM1-203ENST00000546079 LMBRD1Q9NUN5 540 aa20.46■□□□□ 0.87
CLPTM1-203ENST00000546079 PPP6R1Q9UPN7 881 aa20.45■□□□□ 0.86
CLPTM1-203ENST00000546079 SSH1Q8WYL5 1049 aa20.44■□□□□ 0.86
CLPTM1-203ENST00000546079 PRIM1P49642 420 aaKnown RBP20.44■□□□□ 0.86
CLPTM1-203ENST00000546079 MCTP1Q6DN14 999 aa20.44■□□□□ 0.86
CLPTM1-203ENST00000546079 RBM42Q9BTD8 480 aaKnown RBP20.44■□□□□ 0.86
CLPTM1-203ENST00000546079 CCDC94Q9BW85 323 aaPredicted RBP20.44■□□□□ 0.86
CLPTM1-203ENST00000546079 CYP2E1P05181 493 aaPredicted RBP20.43■□□□□ 0.86
CLPTM1-203ENST00000546079 CCDC39Q9UFE4 941 aa20.43■□□□□ 0.86
CLPTM1-203ENST00000546079 TMEM57Q8N5G2 664 aa20.43■□□□□ 0.86
CLPTM1-203ENST00000546079 CFAP53Q96M91 514 aa20.43■□□□□ 0.86
CLPTM1-203ENST00000546079 DMTNQ08495 405 aa20.42■□□□□ 0.86
CLPTM1-203ENST00000546079 TBC1D9Q6ZT07 1266 aa20.42■□□□□ 0.86
CLPTM1-203ENST00000546079 SPATA31D1Q6ZQQ2 1576 aa20.42■□□□□ 0.86
CLPTM1-203ENST00000546079 EXOSC9Q06265 439 aaKnown RBP20.42■□□□□ 0.86
CLPTM1-203ENST00000546079 TULP4Q9NRJ4 1543 aa20.42■□□□□ 0.86
CLPTM1-203ENST00000546079 NCLP19338 710 aaKnown RBP20.41■□□□□ 0.86
CLPTM1-203ENST00000546079 NOB1Q9ULX3 412 aaKnown RBP20.41■□□□□ 0.86
CLPTM1-203ENST00000546079 MTHFSP49914 203 aa20.41■□□□□ 0.86
CLPTM1-203ENST00000546079 NSD3Q9BZ95 1437 aa20.4■□□□□ 0.86
CLPTM1-203ENST00000546079 TSR2Q969E8 191 aaKnown RBP20.4■□□□□ 0.86
CLPTM1-203ENST00000546079 IPO8O15397 1037 aaKnown RBP20.39■□□□□ 0.85
CLPTM1-203ENST00000546079 TNNT2P45379 298 aaPredicted RBP20.39■□□□□ 0.85
CLPTM1-203ENST00000546079 RABEP1Q15276 862 aa20.38■□□□□ 0.85
CLPTM1-203ENST00000546079 ZSCAN20P17040 1043 aaPredicted RBP20.38■□□□□ 0.85
CLPTM1-203ENST00000546079 LRSAM1Q6UWE0 723 aa20.38■□□□□ 0.85
CLPTM1-203ENST00000546079 GCC1Q96CN9 775 aa20.38■□□□□ 0.85
CLPTM1-203ENST00000546079 ADGRB2O60241 1585 aa20.38■□□□□ 0.85
CLPTM1-203ENST00000546079 CWC22Q9HCG8 908 aaKnown RBP20.37■□□□□ 0.85
CLPTM1-203ENST00000546079 ABCC11Q96J66 1382 aa20.37■□□□□ 0.85
CLPTM1-203ENST00000546079 PUS7Q96PZ0 661 aaKnown RBP20.36■□□□□ 0.85
CLPTM1-203ENST00000546079 SLC12A5Q9H2X9 1139 aa20.36■□□□□ 0.85
CLPTM1-203ENST00000546079 USP32Q8NFA0 1604 aa20.36■□□□□ 0.85
CLPTM1-203ENST00000546079 MYRIPQ8NFW9 859 aa20.36■□□□□ 0.85
CLPTM1-203ENST00000546079 ANKRD45Q5TZF3 282 aa20.35■□□□□ 0.85
CLPTM1-203ENST00000546079 GPT2Q8TD30 523 aa20.35■□□□□ 0.85
CLPTM1-203ENST00000546079 ZHX1Q9UKY1 873 aaPredicted RBP20.35■□□□□ 0.85
CLPTM1-203ENST00000546079 PTPRMP28827 1452 aa20.35■□□□□ 0.85
CLPTM1-203ENST00000546079 A2ML1A8K2U0 1454 aa20.35■□□□□ 0.85
CLPTM1-203ENST00000546079 A0A0U1RQG5 324 aaPredicted RBP20.35■□□□□ 0.85
CLPTM1-203ENST00000546079 U2AF1L5P0DN76 240 aaPredicted RBP20.35■□□□□ 0.85
CLPTM1-203ENST00000546079 U2AF1Q01081 240 aaKnown RBP eCLIP20.35■□□□□ 0.85
CLPTM1-203ENST00000546079 PRDM10Q9NQV6 1147 aa20.35■□□□□ 0.85
CLPTM1-203ENST00000546079 ALKQ9UM73 1620 aa20.34■□□□□ 0.85
CLPTM1-203ENST00000546079 IL16Q14005 1332 aa20.34■□□□□ 0.85
CLPTM1-203ENST00000546079 CDC45O75419 566 aa20.34■□□□□ 0.85
CLPTM1-203ENST00000546079 EVC2Q86UK5 1308 aa20.34■□□□□ 0.85
CLPTM1-203ENST00000546079 PRPF40AO75400 957 aaKnown RBP20.33■□□□□ 0.85
CLPTM1-203ENST00000546079 ARID3AQ99856 593 aa20.33■□□□□ 0.85
CLPTM1-203ENST00000546079 MLECQ14165 292 aa20.33■□□□□ 0.84
CLPTM1-203ENST00000546079 CFAP44Q96MT7 982 aa20.33■□□□□ 0.84
CLPTM1-203ENST00000546079 YTHDC2Q9H6S0 1430 aaKnown RBP20.32■□□□□ 0.84
CLPTM1-203ENST00000546079 KIAA2012Q0VF49 1180 aa20.32■□□□□ 0.84
CLPTM1-203ENST00000546079 PRIMPOLQ96LW4 560 aa20.31■□□□□ 0.84
CLPTM1-203ENST00000546079 GTPBP4Q9BZE4 634 aaKnown RBP20.31■□□□□ 0.84
CLPTM1-203ENST00000546079 SENP3Q9H4L4 574 aaPredicted RBP20.31■□□□□ 0.84
CLPTM1-203ENST00000546079 RBM27Q9P2N5 1060 aaKnown RBP20.31■□□□□ 0.84
CLPTM1-203ENST00000546079 ALDH1L2Q3SY69 923 aa20.31■□□□□ 0.84
CLPTM1-203ENST00000546079 CHMP4BQ9H444 224 aaKnown RBP20.31■□□□□ 0.84
CLPTM1-203ENST00000546079 TMEM63CQ9P1W3 806 aa20.31■□□□□ 0.84
CLPTM1-203ENST00000546079 PKP1Q13835 747 aa20.3■□□□□ 0.84
CLPTM1-203ENST00000546079 TRIM35Q9UPQ4 493 aa20.3■□□□□ 0.84
CLPTM1-203ENST00000546079 PPIP5K1Q6PFW1 1433 aa20.3■□□□□ 0.84
CLPTM1-203ENST00000546079 GTF2F1P35269 517 aaKnown RBP eCLIP20.3■□□□□ 0.84
CLPTM1-203ENST00000546079 STK26Q9P289 416 aa20.3■□□□□ 0.84
CLPTM1-203ENST00000546079 SETD1AO15047 1707 aaKnown RBP20.29■□□□□ 0.84
CLPTM1-203ENST00000546079 MED14O60244 1454 aa20.29■□□□□ 0.84
CLPTM1-203ENST00000546079 TMPOP42166 694 aaKnown RBP20.29■□□□□ 0.84
CLPTM1-203ENST00000546079 HMGN5P82970 282 aaKnown RBP20.29■□□□□ 0.84
CLPTM1-203ENST00000546079 STAG3Q9UJ98 1225 aa20.29■□□□□ 0.84
CLPTM1-203ENST00000546079 SYCE3A1L190 88 aa20.28■□□□□ 0.84
CLPTM1-203ENST00000546079 KIF20AO95235 890 aa20.28■□□□□ 0.84
CLPTM1-203ENST00000546079 FGD1P98174 961 aa20.28■□□□□ 0.84
CLPTM1-203ENST00000546079 PLEKHF1Q96S99 279 aa20.28■□□□□ 0.84
CLPTM1-203ENST00000546079 ZBTB7BO15156 539 aaPredicted RBP20.28■□□□□ 0.84
CLPTM1-203ENST00000546079 BRPF1P55201 1214 aaPredicted RBP20.28■□□□□ 0.84
CLPTM1-203ENST00000546079 ANKRD36BQ8N2N9 1353 aa20.28■□□□□ 0.84
CLPTM1-203ENST00000546079 SAFB2Q14151 953 aaKnown RBP eCLIP20.27■□□□□ 0.84
CLPTM1-203ENST00000546079 RIMS2Q9UQ26 1411 aa20.27■□□□□ 0.84
CLPTM1-203ENST00000546079 MBD3O95983 291 aa20.27■□□□□ 0.84
CLPTM1-203ENST00000546079 CABP2Q9NPB3 220 aa20.27■□□□□ 0.84
CLPTM1-203ENST00000546079 ZDHHC9Q9Y397 364 aa20.26■□□□□ 0.83
CLPTM1-203ENST00000546079 ZNF710Q8N1W2 664 aa20.26■□□□□ 0.83
CLPTM1-203ENST00000546079 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.26■□□□□ 0.831e-6■□□□□ 8.8
CLPTM1-203ENST00000546079 AK9Q5TCS8 1911 aa20.26■□□□□ 0.83
CLPTM1-203ENST00000546079 USP26Q9BXU7 913 aa20.25■□□□□ 0.83
CLPTM1-203ENST00000546079 NSD2O96028 1365 aa20.25■□□□□ 0.83
CLPTM1-203ENST00000546079 PTMAP06454 111 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms