RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 EMILIN1Q9Y6C2 1016 aa19.25■□□□□ 0.67
CNN3-207ENST00000545882 UBR1Q8IWV7 1749 aa19.25■□□□□ 0.67
CNN3-207ENST00000545882 METP08581 1390 aa19.25■□□□□ 0.67
CNN3-207ENST00000545882 IL13P35225 146 aa19.25■□□□□ 0.67
CNN3-207ENST00000545882 LNPKQ9C0E8 428 aa19.25■□□□□ 0.67
CNN3-207ENST00000545882 ZNF853P0CG23 659 aa19.24■□□□□ 0.67
CNN3-207ENST00000545882 CHD1LQ86WJ1 897 aa19.24■□□□□ 0.67
CNN3-207ENST00000545882 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.24■□□□□ 0.67
CNN3-207ENST00000545882 CDK12Q9NYV4 1490 aaPredicted RBP19.24■□□□□ 0.67
CNN3-207ENST00000545882 AKAP12Q02952 1782 aa19.24■□□□□ 0.67
CNN3-207ENST00000545882 ANO8Q9HCE9 1232 aaPredicted RBP19.23■□□□□ 0.67
CNN3-207ENST00000545882 ZRANB1Q9UGI0 708 aa19.23■□□□□ 0.67
CNN3-207ENST00000545882 EDC4Q6P2E9 1401 aaKnown RBP19.23■□□□□ 0.67
CNN3-207ENST00000545882 ARHGAP45Q92619 1136 aa19.23■□□□□ 0.67
CNN3-207ENST00000545882 ZNF692Q9BU19 519 aaPredicted RBP19.23■□□□□ 0.67
CNN3-207ENST00000545882 RBM25P49756 843 aaKnown RBP19.22■□□□□ 0.67
CNN3-207ENST00000545882 NME9Q86XW9 330 aa19.22■□□□□ 0.67
CNN3-207ENST00000545882 NCOA3Q9Y6Q9 1424 aa19.22■□□□□ 0.67
CNN3-207ENST00000545882 MCM4P33991 863 aa19.21■□□□□ 0.67
CNN3-207ENST00000545882 IFT57Q9NWB7 429 aa19.21■□□□□ 0.67
CNN3-207ENST00000545882 CHMP5Q9NZZ3 219 aa19.21■□□□□ 0.67
CNN3-207ENST00000545882 TNRQ92752 1358 aa19.21■□□□□ 0.67
CNN3-207ENST00000545882 MBIPQ9NS73 344 aa19.21■□□□□ 0.67
CNN3-207ENST00000545882 C3P01024 1663 aa19.2■□□□□ 0.66
CNN3-207ENST00000545882 GNAI1P63096 354 aa19.2■□□□□ 0.66
CNN3-207ENST00000545882 C1orf115Q9H7X2 142 aa19.2■□□□□ 0.66
CNN3-207ENST00000545882 AATKQ6ZMQ8 1374 aa19.2■□□□□ 0.66
CNN3-207ENST00000545882 ABCC4O15439 1325 aa19.2■□□□□ 0.66
CNN3-207ENST00000545882 WASLO00401 505 aaPredicted RBP19.19■□□□□ 0.66
CNN3-207ENST00000545882 SIRT2Q8IXJ6 389 aa19.19■□□□□ 0.66
CNN3-207ENST00000545882 SIRT1Q96EB6 747 aa19.19■□□□□ 0.66
CNN3-207ENST00000545882 ITSN1Q15811 1721 aa19.19■□□□□ 0.66
CNN3-207ENST00000545882 DDIT3P35638 169 aa19.19■□□□□ 0.66
CNN3-207ENST00000545882 BMP2KLQ5H9B9 411 aa19.19■□□□□ 0.66
CNN3-207ENST00000545882 CALD1Q05682 793 aaKnown RBP19.18■□□□□ 0.66
CNN3-207ENST00000545882 TMEM2Q9UHN6 1383 aa19.18■□□□□ 0.66
CNN3-207ENST00000545882 ELL2O00472 640 aaPredicted RBP19.17■□□□□ 0.66
CNN3-207ENST00000545882 GCC1Q96CN9 775 aa19.17■□□□□ 0.66
CNN3-207ENST00000545882 ANKRD45Q5TZF3 282 aa19.17■□□□□ 0.66
CNN3-207ENST00000545882 HSCBQ8IWL3 235 aa19.17■□□□□ 0.66
CNN3-207ENST00000545882 C8orf58Q8NAV2 365 aa19.17■□□□□ 0.66
CNN3-207ENST00000545882 SNX21Q969T3 373 aa19.17■□□□□ 0.66
CNN3-207ENST00000545882 ESF1Q9H501 851 aaKnown RBP19.17■□□□□ 0.66
CNN3-207ENST00000545882 NCKAP5LQ9HCH0 1330 aa19.16■□□□□ 0.66
CNN3-207ENST00000545882 KIF2CQ99661 725 aa19.16■□□□□ 0.66
CNN3-207ENST00000545882 TWISTNBQ3B726 338 aaPredicted RBP19.15■□□□□ 0.66
CNN3-207ENST00000545882 NRKQ7Z2Y5 1582 aa19.15■□□□□ 0.66
CNN3-207ENST00000545882 CFAP44Q96MT7 982 aa19.15■□□□□ 0.66
CNN3-207ENST00000545882 ADAMTS13Q76LX8 1427 aa19.15■□□□□ 0.66
CNN3-207ENST00000545882 FAM83GA6ND36 823 aa19.14■□□□□ 0.65
CNN3-207ENST00000545882 HDGFP51858 240 aaKnown RBP19.14■□□□□ 0.65
CNN3-207ENST00000545882 L1TD1Q5T7N2 865 aaKnown RBP19.14■□□□□ 0.65
CNN3-207ENST00000545882 FAM43AQ8N2R8 423 aa19.14■□□□□ 0.65
CNN3-207ENST00000545882 NUDT16Q96DE0 195 aaKnown RBP19.14■□□□□ 0.65
CNN3-207ENST00000545882 CHMP4BQ9H444 224 aaKnown RBP19.14■□□□□ 0.65
CNN3-207ENST00000545882 FSD2A1L4K1 749 aa19.13■□□□□ 0.65
CNN3-207ENST00000545882 RRS1Q15050 365 aaKnown RBP19.13■□□□□ 0.65
CNN3-207ENST00000545882 TXNDC2Q86VQ3 553 aa19.13■□□□□ 0.65
CNN3-207ENST00000545882 COG3Q96JB2 828 aa19.12■□□□□ 0.65
CNN3-207ENST00000545882 TOPAZ1Q8N9V7 1692 aa19.11■□□□□ 0.65
CNN3-207ENST00000545882 TRAK2O60296 914 aa19.11■□□□□ 0.65
CNN3-207ENST00000545882 DCTN1Q14203 1278 aa19.11■□□□□ 0.65
CNN3-207ENST00000545882 TBC1D9Q6ZT07 1266 aa19.11■□□□□ 0.65
CNN3-207ENST00000545882 XRCC6P12956 609 aaKnown RBP eCLIP19.1■□□□□ 0.65
CNN3-207ENST00000545882 LMOD3Q0VAK6 560 aa19.1■□□□□ 0.65
CNN3-207ENST00000545882 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.1■□□□□ 0.65
CNN3-207ENST00000545882 API5Q9BZZ5 524 aaKnown RBP19.1■□□□□ 0.65
CNN3-207ENST00000545882 CCDC61Q9Y6R9 512 aa19.1■□□□□ 0.65
CNN3-207ENST00000545882 PRR36Q9H6K5 1346 aa19.09■□□□□ 0.65
CNN3-207ENST00000545882 ROBO2Q9HCK4 1378 aa19.09■□□□□ 0.65
CNN3-207ENST00000545882 PLEKHG1Q9ULL1 1385 aa19.09■□□□□ 0.65
CNN3-207ENST00000545882 CD2BP2O95400 341 aaKnown RBP19.09■□□□□ 0.65
CNN3-207ENST00000545882 KIF24Q5T7B8 1368 aa19.08■□□□□ 0.65
CNN3-207ENST00000545882 GZF1Q9H116 711 aaPredicted RBP19.08■□□□□ 0.65
CNN3-207ENST00000545882 RGS12O14924 1447 aa19.08■□□□□ 0.64
CNN3-207ENST00000545882 GOLGA6L3A6NEY3 463 aa19.07■□□□□ 0.64
CNN3-207ENST00000545882 RGPD1P0DJD0 1748 aa19.07■□□□□ 0.64
CNN3-207ENST00000545882 PEAK1Q9H792 1746 aa19.07■□□□□ 0.64
CNN3-207ENST00000545882 AEBP1Q8IUX7 1158 aa19.06■□□□□ 0.64
CNN3-207ENST00000545882 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.06■□□□□ 0.64
CNN3-207ENST00000545882 NALCNQ8IZF0 1738 aa19.06■□□□□ 0.64
CNN3-207ENST00000545882 GSPT1P15170 499 aaKnown RBP19.06■□□□□ 0.64
CNN3-207ENST00000545882 TNPO1Q92973 898 aaKnown RBP19.06■□□□□ 0.64
CNN3-207ENST00000545882 SLIT1O75093 1534 aa19.05■□□□□ 0.64
CNN3-207ENST00000545882 PLEKHM2Q8IWE5 1019 aa19.05■□□□□ 0.64
CNN3-207ENST00000545882 RBM42Q9BTD8 480 aaKnown RBP19.05■□□□□ 0.64
CNN3-207ENST00000545882 DCTPP1Q9H773 170 aa19.05■□□□□ 0.64
CNN3-207ENST00000545882 CIZ1Q9ULV3 898 aaPredicted RBP19.05■□□□□ 0.64
CNN3-207ENST00000545882 ARHGAP23Q9P227 1491 aa19.04■□□□□ 0.64
CNN3-207ENST00000545882 DDX11L8A8MPP1 907 aa19.04■□□□□ 0.64
CNN3-207ENST00000545882 EIF4A2Q14240 407 aaKnown RBP19.04■□□□□ 0.64
CNN3-207ENST00000545882 INTS3Q68E01 1043 aaKnown RBP19.04■□□□□ 0.64
CNN3-207ENST00000545882 RRAGDQ9NQL2 400 aaPredicted RBP19.04■□□□□ 0.64
CNN3-207ENST00000545882 ATP10DQ9P241 1426 aa19.04■□□□□ 0.64
CNN3-207ENST00000545882 HSP90AB1P08238 724 aaKnown RBP19.04■□□□□ 0.64
CNN3-207ENST00000545882 RAB3GAP1Q15042 981 aa19.04■□□□□ 0.64
CNN3-207ENST00000545882 KRT24Q2M2I5 525 aa19.04■□□□□ 0.64
CNN3-207ENST00000545882 AK9Q5TCS8 1911 aa19.03■□□□□ 0.64
CNN3-207ENST00000545882 CDC45O75419 566 aa19.03■□□□□ 0.64
CNN3-207ENST00000545882 LTKP29376 864 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms