RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 SLC26A8Q96RN1 970 aa19.71■□□□□ 0.75
SCAP-215ENST00000545718 RTN4Q9NQC3 1192 aaKnown RBP19.71■□□□□ 0.75
SCAP-215ENST00000545718 AEBP1Q8IUX7 1158 aa19.7■□□□□ 0.74
SCAP-215ENST00000545718 SPATA31D1Q6ZQQ2 1576 aa19.7■□□□□ 0.74
SCAP-215ENST00000545718 AGLP35573 1532 aa19.69■□□□□ 0.74
SCAP-215ENST00000545718 ANKRD45Q5TZF3 282 aa19.69■□□□□ 0.74
SCAP-215ENST00000545718 SMC5Q8IY18 1101 aa19.69■□□□□ 0.74
SCAP-215ENST00000545718 C8orf58Q8NAV2 365 aa19.69■□□□□ 0.74
SCAP-215ENST00000545718 TBC1D2Q9BYX2 928 aa19.69■□□□□ 0.74
SCAP-215ENST00000545718 C22orf23Q9BZE7 217 aa19.69■□□□□ 0.74
SCAP-215ENST00000545718 PRR36Q9H6K5 1346 aa19.69■□□□□ 0.74
SCAP-215ENST00000545718 SULT6B1Q6IMI4 303 aa19.69■□□□□ 0.74
SCAP-215ENST00000545718 IL27Q8NEV9 243 aa19.69■□□□□ 0.74
SCAP-215ENST00000545718 CEBPAP49715 358 aaPredicted RBP19.68■□□□□ 0.74
SCAP-215ENST00000545718 CPSF1Q10570 1443 aaKnown RBP19.68■□□□□ 0.74
SCAP-215ENST00000545718 DLC1Q96QB1 1528 aa19.68■□□□□ 0.74
SCAP-215ENST00000545718 MRPL50Q8N5N7 158 aaKnown RBP19.68■□□□□ 0.74
SCAP-215ENST00000545718 IFT57Q9NWB7 429 aa19.68■□□□□ 0.74
SCAP-215ENST00000545718 TNRQ92752 1358 aa19.67■□□□□ 0.74
SCAP-215ENST00000545718 VIRMAQ69YN4 1812 aaKnown RBP19.67■□□□□ 0.74
SCAP-215ENST00000545718 CPS1P31327 1500 aa19.66■□□□□ 0.74
SCAP-215ENST00000545718 LMOD3Q0VAK6 560 aa19.66■□□□□ 0.74
SCAP-215ENST00000545718 CHD1LQ86WJ1 897 aa19.65■□□□□ 0.74
SCAP-215ENST00000545718 KRT24Q2M2I5 525 aa19.65■□□□□ 0.74
SCAP-215ENST00000545718 ZNF692Q9BU19 519 aaPredicted RBP19.65■□□□□ 0.74
SCAP-215ENST00000545718 ROBO2Q9HCK4 1378 aa19.65■□□□□ 0.74
SCAP-215ENST00000545718 ACEP12821 1306 aa19.65■□□□□ 0.74
SCAP-215ENST00000545718 CFAP44Q96MT7 982 aa19.65■□□□□ 0.74
SCAP-215ENST00000545718 ZNF428Q96B54 188 aa19.64■□□□□ 0.73
SCAP-215ENST00000545718 ZBTB7BO15156 539 aaPredicted RBP19.64■□□□□ 0.73
SCAP-215ENST00000545718 NUCB1Q02818 461 aa19.64■□□□□ 0.73
SCAP-215ENST00000545718 MCM10Q7L590 875 aa19.64■□□□□ 0.73
SCAP-215ENST00000545718 EIF4A2Q14240 407 aaKnown RBP19.63■□□□□ 0.73
SCAP-215ENST00000545718 LTKP29376 864 aa19.62■□□□□ 0.73
SCAP-215ENST00000545718 HSP90AB2PQ58FF8 381 aa19.62■□□□□ 0.73
SCAP-215ENST00000545718 TTC21BQ7Z4L5 1316 aa19.62■□□□□ 0.73
SCAP-215ENST00000545718 CDK12Q9NYV4 1490 aaPredicted RBP19.61■□□□□ 0.73
SCAP-215ENST00000545718 TMEM2Q9UHN6 1383 aa19.61■□□□□ 0.73
SCAP-215ENST00000545718 REREQ9P2R6 1566 aa19.61■□□□□ 0.73
SCAP-215ENST00000545718 BRPF3Q9ULD4 1205 aa19.61■□□□□ 0.73
SCAP-215ENST00000545718 AATKQ6ZMQ8 1374 aa19.6■□□□□ 0.73
SCAP-215ENST00000545718 ZNF853P0CG23 659 aa19.6■□□□□ 0.73
SCAP-215ENST00000545718 NRXN3Q9Y4C0 1643 aa19.6■□□□□ 0.73
SCAP-215ENST00000545718 ARXQ96QS3 562 aa19.6■□□□□ 0.73
SCAP-215ENST00000545718 SETD1AO15047 1707 aaKnown RBP19.6■□□□□ 0.73
SCAP-215ENST00000545718 CDC42BPGQ6DT37 1551 aa19.59■□□□□ 0.73
SCAP-215ENST00000545718 MIS18AQ9NYP9 233 aa19.59■□□□□ 0.73
SCAP-215ENST00000545718 CHMP4BQ9H444 224 aaKnown RBP19.59■□□□□ 0.73
SCAP-215ENST00000545718 APBB1O00213 710 aa19.58■□□□□ 0.73
SCAP-215ENST00000545718 ARHGAP45Q92619 1136 aa19.58■□□□□ 0.72
SCAP-215ENST00000545718 API5Q9BZZ5 524 aaKnown RBP19.58■□□□□ 0.72
SCAP-215ENST00000545718 NGDNQ8NEJ9 315 aaKnown RBP19.57■□□□□ 0.72
SCAP-215ENST00000545718 BRPF1P55201 1214 aaPredicted RBP19.56■□□□□ 0.72
SCAP-215ENST00000545718 SIRT2Q8IXJ6 389 aa19.56■□□□□ 0.72
SCAP-215ENST00000545718 EID1Q9Y6B2 187 aa19.56■□□□□ 0.72
SCAP-215ENST00000545718 HSCBQ8IWL3 235 aa19.56■□□□□ 0.72
SCAP-215ENST00000545718 ANTXR1Q9H6X2 564 aa19.56■□□□□ 0.72
SCAP-215ENST00000545718 GCC1Q96CN9 775 aa19.56■□□□□ 0.72
SCAP-215ENST00000545718 SIRT1Q96EB6 747 aa19.55■□□□□ 0.72
SCAP-215ENST00000545718 NUTM2GQ5VZR2 741 aa19.55■□□□□ 0.72
SCAP-215ENST00000545718 AMOTL2Q9Y2J4 779 aa19.55■□□□□ 0.72
SCAP-215ENST00000545718 ABCC4O15439 1325 aa19.54■□□□□ 0.72
SCAP-215ENST00000545718 FOXO3O43524 673 aa19.54■□□□□ 0.72
SCAP-215ENST00000545718 PTCH1Q13635 1447 aa19.53■□□□□ 0.72
SCAP-215ENST00000545718 AMPHP49418 695 aa19.52■□□□□ 0.71
SCAP-215ENST00000545718 TECPR2O15040 1411 aa19.51■□□□□ 0.71
SCAP-215ENST00000545718 ADAMTS13Q76LX8 1427 aa19.51■□□□□ 0.71
SCAP-215ENST00000545718 BMP2KLQ5H9B9 411 aa19.51■□□□□ 0.71
SCAP-215ENST00000545718 RTF1Q92541 710 aaKnown RBP19.51■□□□□ 0.71
SCAP-215ENST00000545718 SLC4A10Q6U841 1118 aa19.51■□□□□ 0.71
SCAP-215ENST00000545718 GZF1Q9H116 711 aaPredicted RBP19.51■□□□□ 0.71
SCAP-215ENST00000545718 FOXD4L1Q9NU39 408 aa19.5■□□□□ 0.71
SCAP-215ENST00000545718 C14orf37Q86TY3 774 aa19.5■□□□□ 0.71
SCAP-215ENST00000545718 HSP90AA1P07900 732 aaKnown RBP19.5■□□□□ 0.71
SCAP-215ENST00000545718 MAP3K19Q56UN5 1328 aa19.49■□□□□ 0.71
SCAP-215ENST00000545718 PLEKHG3A1L390 1219 aa19.49■□□□□ 0.71
SCAP-215ENST00000545718 SLC4A2P04920 1241 aa19.49■□□□□ 0.71
SCAP-215ENST00000545718 DLG5Q8TDM6 1919 aa19.49■□□□□ 0.71
SCAP-215ENST00000545718 HSP90AB1P08238 724 aaKnown RBP19.48■□□□□ 0.71
SCAP-215ENST00000545718 TBC1D9Q6ZT07 1266 aa19.48■□□□□ 0.71
SCAP-215ENST00000545718 LTV1Q96GA3 475 aaPredicted RBP19.48■□□□□ 0.71
SCAP-215ENST00000545718 USP6P35125 1406 aa19.48■□□□□ 0.71
SCAP-215ENST00000545718 CHL1O00533 1208 aa19.48■□□□□ 0.71
SCAP-215ENST00000545718 C16orf71Q8IYS4 520 aaPredicted RBP19.48■□□□□ 0.71
SCAP-215ENST00000545718 TSPYL4Q9UJ04 414 aa19.48■□□□□ 0.71
SCAP-215ENST00000545718 ITSN1Q15811 1721 aa19.48■□□□□ 0.71
SCAP-215ENST00000545718 NECTIN2Q92692 538 aa19.47■□□□□ 0.71
SCAP-215ENST00000545718 PIK3R4Q99570 1358 aa19.47■□□□□ 0.71
SCAP-215ENST00000545718 PLEKHG5O94827 1062 aa19.47■□□□□ 0.71
SCAP-215ENST00000545718 CHMP5Q9NZZ3 219 aa19.47■□□□□ 0.71
SCAP-215ENST00000545718 MON2Q7Z3U7 1717 aa19.47■□□□□ 0.71
SCAP-215ENST00000545718 NLRP6P59044 892 aa19.47■□□□□ 0.71
SCAP-215ENST00000545718 MTHFSDQ2M296 383 aaKnown RBP19.47■□□□□ 0.71
SCAP-215ENST00000545718 HAP1P54257 671 aaPredicted RBP19.46■□□□□ 0.71
SCAP-215ENST00000545718 KIF13AQ9H1H9 1805 aa19.46■□□□□ 0.71
SCAP-215ENST00000545718 F6X3S4 739 aa19.45■□□□□ 0.7
SCAP-215ENST00000545718 SMARCA5O60264 1052 aaPredicted RBP19.45■□□□□ 0.7
SCAP-215ENST00000545718 MEIS3Q99687 375 aa19.45■□□□□ 0.7
SCAP-215ENST00000545718 C3P01024 1663 aa19.45■□□□□ 0.7
SCAP-215ENST00000545718 PLEKHG1Q9ULL1 1385 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms