RNA–Protein interactions for RNA: ENST00000545620.5

SMAD5-212, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD5, Length 6,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-212ENST00000545620 PLEKHG1Q9ULL1 1385 aa6.2□□□□□ -1.42
SMAD5-212ENST00000545620 DDX17Q92841 729 aaKnown RBP6.19□□□□□ -1.42
SMAD5-212ENST00000545620 NUDT16Q96DE0 195 aaKnown RBP6.19□□□□□ -1.42
SMAD5-212ENST00000545620 SRPK2P78362 688 aaKnown RBP6.19□□□□□ -1.42
SMAD5-212ENST00000545620 HSP90AB2PQ58FF8 381 aa6.19□□□□□ -1.42
SMAD5-212ENST00000545620 NFAT5O94916 1531 aa6.19□□□□□ -1.42
SMAD5-212ENST00000545620 LRRC37A3O60309 1634 aa6.19□□□□□ -1.42
SMAD5-212ENST00000545620 HMOX1P09601 288 aa6.19□□□□□ -1.42
SMAD5-212ENST00000545620 EVC2Q86UK5 1308 aa6.18□□□□□ -1.42
SMAD5-212ENST00000545620 USP6P35125 1406 aa6.18□□□□□ -1.42
SMAD5-212ENST00000545620 RARSP54136 660 aaKnown RBP6.18□□□□□ -1.42
SMAD5-212ENST00000545620 PMFBP1Q8TBY8 1022 aa6.18□□□□□ -1.42
SMAD5-212ENST00000545620 ACEP12821 1306 aa6.18□□□□□ -1.42
SMAD5-212ENST00000545620 GLI3P10071 1580 aa6.18□□□□□ -1.42
SMAD5-212ENST00000545620 HSP90AA1P07900 732 aaKnown RBP6.18□□□□□ -1.42
SMAD5-212ENST00000545620 ANO8Q9HCE9 1232 aaPredicted RBP6.17□□□□□ -1.42
SMAD5-212ENST00000545620 FANCIQ9NVI1 1328 aa6.17□□□□□ -1.42
SMAD5-212ENST00000545620 MED1Q15648 1581 aaPredicted RBP6.17□□□□□ -1.42
SMAD5-212ENST00000545620 MORC1Q86VD1 984 aa6.17□□□□□ -1.42
SMAD5-212ENST00000545620 DNAH12Q6ZR08 3092 aa6.17□□□□□ -1.42
SMAD5-212ENST00000545620 AMOTL2Q9Y2J4 779 aa6.17□□□□□ -1.42
SMAD5-212ENST00000545620 COL18A1P39060 1754 aa6.17□□□□□ -1.42
SMAD5-212ENST00000545620 C8orf34Q49A92 452 aa6.17□□□□□ -1.42
SMAD5-212ENST00000545620 PDIA4P13667 645 aaKnown RBP6.17□□□□□ -1.42
SMAD5-212ENST00000545620 USP34Q70CQ2 3546 aa6.16□□□□□ -1.42
SMAD5-212ENST00000545620 SIRT2Q8IXJ6 389 aa6.16□□□□□ -1.42
SMAD5-212ENST00000545620 TMPOP42166 694 aaKnown RBP6.16□□□□□ -1.42
SMAD5-212ENST00000545620 TCERG1O14776 1098 aaKnown RBP6.16□□□□□ -1.42
SMAD5-212ENST00000545620 NUTM2GQ5VZR2 741 aa6.16□□□□□ -1.42
SMAD5-212ENST00000545620 PUS7Q96PZ0 661 aaKnown RBP6.16□□□□□ -1.42
SMAD5-212ENST00000545620 PIK3R4Q99570 1358 aa6.16□□□□□ -1.42
SMAD5-212ENST00000545620 SIPA1L3O60292 1781 aaPredicted RBP6.16□□□□□ -1.42
SMAD5-212ENST00000545620 ALS2Q96Q42 1657 aa6.16□□□□□ -1.42
SMAD5-212ENST00000545620 EDC4Q6P2E9 1401 aaKnown RBP6.16□□□□□ -1.42
SMAD5-212ENST00000545620 CGNL1Q0VF96 1302 aa6.15□□□□□ -1.42
SMAD5-212ENST00000545620 USP31Q70CQ4 1352 aa6.15□□□□□ -1.42
SMAD5-212ENST00000545620 GOLGA2Q08379 1002 aa6.15□□□□□ -1.42
SMAD5-212ENST00000545620 EIF4A2Q14240 407 aaKnown RBP6.15□□□□□ -1.42
SMAD5-212ENST00000545620 PTCH1Q13635 1447 aa6.15□□□□□ -1.42
SMAD5-212ENST00000545620 ZNF853P0CG23 659 aa6.15□□□□□ -1.42
SMAD5-212ENST00000545620 AXIN2Q9Y2T1 843 aa6.15□□□□□ -1.42
SMAD5-212ENST00000545620 PXDNQ92626 1479 aa6.15□□□□□ -1.42
SMAD5-212ENST00000545620 CDK12Q9NYV4 1490 aaPredicted RBP6.15□□□□□ -1.42
SMAD5-212ENST00000545620 FAM208AQ9UK61 1670 aaKnown RBP6.15□□□□□ -1.43
SMAD5-212ENST00000545620 MAP3K19Q56UN5 1328 aa6.15□□□□□ -1.43
SMAD5-212ENST00000545620 C8orf58Q8NAV2 365 aa6.15□□□□□ -1.43
SMAD5-212ENST00000545620 SSH1Q8WYL5 1049 aa6.15□□□□□ -1.43
SMAD5-212ENST00000545620 MIS18AQ9NYP9 233 aa6.15□□□□□ -1.43
SMAD5-212ENST00000545620 SHANK3Q9BYB0 1731 aa6.15□□□□□ -1.43
SMAD5-212ENST00000545620 CRB1P82279 1406 aa6.14□□□□□ -1.43
SMAD5-212ENST00000545620 COG6Q9Y2V7 657 aa6.14□□□□□ -1.43
SMAD5-212ENST00000545620 ORAI2Q96SN7 254 aa6.14□□□□□ -1.43
SMAD5-212ENST00000545620 LMO7Q8WWI1 1683 aa6.14□□□□□ -1.43
SMAD5-212ENST00000545620 TTC21BQ7Z4L5 1316 aa6.14□□□□□ -1.43
SMAD5-212ENST00000545620 CLUAP1Q96AJ1 413 aa6.14□□□□□ -1.43
SMAD5-212ENST00000545620 PPP6R1Q9UPN7 881 aa6.14□□□□□ -1.43
SMAD5-212ENST00000545620 EXOSC9Q06265 439 aaKnown RBP6.14□□□□□ -1.43
SMAD5-212ENST00000545620 MAPK8IP2Q13387 824 aaPredicted RBP6.14□□□□□ -1.43
SMAD5-212ENST00000545620 PDE4AP27815 886 aa6.13□□□□□ -1.43
SMAD5-212ENST00000545620 LAS1LQ9Y4W2 734 aaKnown RBP6.13□□□□□ -1.43
SMAD5-212ENST00000545620 PHRF1Q9P1Y6 1649 aaKnown RBP6.13□□□□□ -1.43
SMAD5-212ENST00000545620 TRIM27P14373 513 aa6.13□□□□□ -1.43
SMAD5-212ENST00000545620 PRKAR2BP31323 418 aa6.13□□□□□ -1.43
SMAD5-212ENST00000545620 XPCQ01831 940 aaPredicted RBP6.13□□□□□ -1.43
SMAD5-212ENST00000545620 CAMTA1Q9Y6Y1 1673 aa6.13□□□□□ -1.43
SMAD5-212ENST00000545620 U2AF1L5P0DN76 240 aaPredicted RBP6.13□□□□□ -1.43
SMAD5-212ENST00000545620 U2AF1Q01081 240 aaKnown RBP eCLIP6.13□□□□□ -1.43
SMAD5-212ENST00000545620 DNTTIP2Q5QJE6 756 aaKnown RBP6.13□□□□□ -1.43
SMAD5-212ENST00000545620 MSH6P52701 1360 aa6.13□□□□□ -1.43
SMAD5-212ENST00000545620 PLEKHG3A1L390 1219 aa6.13□□□□□ -1.43
SMAD5-212ENST00000545620 KLHL34Q8N239 644 aa6.13□□□□□ -1.43
SMAD5-212ENST00000545620 RUNDC1Q96C34 613 aa6.13□□□□□ -1.43
SMAD5-212ENST00000545620 KDM4FA0A1W2PPD8 638 aa6.13□□□□□ -1.43
SMAD5-212ENST00000545620 POGKQ9P215 609 aa6.13□□□□□ -1.43
SMAD5-212ENST00000545620 C5P01031 1676 aa6.13□□□□□ -1.43
SMAD5-212ENST00000545620 SOX12O15370 315 aa6.13□□□□□ -1.43
SMAD5-212ENST00000545620 DNAJC5Q9H3Z4 198 aa6.13□□□□□ -1.43
SMAD5-212ENST00000545620 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.12□□□□□ -1.43
SMAD5-212ENST00000545620 CCDC61Q9Y6R9 512 aa6.12□□□□□ -1.43
SMAD5-212ENST00000545620 TRHP20396 242 aaPredicted RBP6.12□□□□□ -1.43
SMAD5-212ENST00000545620 AATKQ6ZMQ8 1374 aa6.12□□□□□ -1.43
SMAD5-212ENST00000545620 CCDC27Q2M243 656 aa6.12□□□□□ -1.43
SMAD5-212ENST00000545620 MCM10Q7L590 875 aa6.12□□□□□ -1.43
SMAD5-212ENST00000545620 MBIPQ9NS73 344 aa6.12□□□□□ -1.43
SMAD5-212ENST00000545620 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.12□□□□□ -1.43
SMAD5-212ENST00000545620 KDM3BQ7LBC6 1761 aa6.12□□□□□ -1.43
SMAD5-212ENST00000545620 ADAMTS7Q9UKP4 1686 aa6.11□□□□□ -1.43
SMAD5-212ENST00000545620 PPM1GO15355 546 aaPredicted RBP6.11□□□□□ -1.43
SMAD5-212ENST00000545620 PDE3BQ13370 1112 aa6.11□□□□□ -1.43
SMAD5-212ENST00000545620 USHBP1Q8N6Y0 703 aa6.11□□□□□ -1.43
SMAD5-212ENST00000545620 BACH2Q9BYV9 841 aa6.11□□□□□ -1.43
SMAD5-212ENST00000545620 NSD2O96028 1365 aa6.11□□□□□ -1.43
SMAD5-212ENST00000545620 ELL2O00472 640 aaPredicted RBP6.11□□□□□ -1.43
SMAD5-212ENST00000545620 VAMP4O75379 141 aa6.11□□□□□ -1.43
SMAD5-212ENST00000545620 CANXP27824 592 aaKnown RBP6.11□□□□□ -1.43
SMAD5-212ENST00000545620 SLC4A3P48751 1232 aa6.11□□□□□ -1.43
SMAD5-212ENST00000545620 PRAMEF22A3QJZ6 481 aa6.11□□□□□ -1.43
SMAD5-212ENST00000545620 STK11IPQ8N1F8 1099 aa6.11□□□□□ -1.43
SMAD5-212ENST00000545620 CCDC9Q9Y3X0 531 aaKnown RBP6.11□□□□□ -1.43
SMAD5-212ENST00000545620 DHX37Q8IY37 1157 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms