RNA–Protein interactions for RNA: ENST00000545419.5

RNF10-223, Transcript of ring finger protein 10, human

TSL 5

Gene RNF10, Length 1,336 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-223	ENST00000545419	POTEA	Q6S8J7	498 aa		11.13	□□□□□ -0.63
RNF10-223	ENST00000545419	CABP1	Q9NZU7	370 aa		11.13	□□□□□ -0.63
RNF10-223	ENST00000545419	TULP4	Q9NRJ4	1543 aa		11.13	□□□□□ -0.63
RNF10-223	ENST00000545419	SHPRH	Q149N8	1683 aa		11.13	□□□□□ -0.63
RNF10-223	ENST00000545419	ARHGEF28	Q8N1W1	1705 aa	Known RBP	11.12	□□□□□ -0.63
RNF10-223	ENST00000545419	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.12	□□□□□ -0.63
RNF10-223	ENST00000545419	FBXO22	Q8NEZ5	403 aa		11.12	□□□□□ -0.63
RNF10-223	ENST00000545419	NGLY1	Q96IV0	654 aa		11.12	□□□□□ -0.63
RNF10-223	ENST00000545419	TRIM35	Q9UPQ4	493 aa		11.12	□□□□□ -0.63
RNF10-223	ENST00000545419	RGPD8	O14715	1765 aa	Predicted RBP	11.12	□□□□□ -0.63
RNF10-223	ENST00000545419	ACE	P12821	1306 aa		11.12	□□□□□ -0.63
RNF10-223	ENST00000545419	POLR3A	O14802	1390 aa	Predicted RBP	11.12	□□□□□ -0.63
RNF10-223	ENST00000545419	SBNO2	Q9Y2G9	1366 aa		11.12	□□□□□ -0.63
RNF10-223	ENST00000545419	USP32	Q8NFA0	1604 aa		11.11	□□□□□ -0.63
RNF10-223	ENST00000545419	ST20-MTHFS	A0A0A6YYL1	179 aa		11.1	□□□□□ -0.63
RNF10-223	ENST00000545419	ADAMTS2	O95450	1211 aa		11.1	□□□□□ -0.63
RNF10-223	ENST00000545419	TESK2	Q96S53	571 aa		11.1	□□□□□ -0.63
RNF10-223	ENST00000545419	QTRT2	Q9H974	415 aa	Known RBP	11.1	□□□□□ -0.63
RNF10-223	ENST00000545419	LRP6	O75581	1613 aa		11.1	□□□□□ -0.63
RNF10-223	ENST00000545419	KIF1A	Q12756	1690 aa		11.1	□□□□□ -0.63
RNF10-223	ENST00000545419	RALGAPB	Q86X10	1494 aa		11.1	□□□□□ -0.63
RNF10-223	ENST00000545419	C8orf37	Q96NL8	207 aa		11.09	□□□□□ -0.63
RNF10-223	ENST00000545419	DCBLD2	Q96PD2	775 aa		11.09	□□□□□ -0.63
RNF10-223	ENST00000545419	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.09	□□□□□ -0.63	3e-9	■■□□□ 13.2
RNF10-223	ENST00000545419	ARHGEF10	O15013	1369 aa		11.09	□□□□□ -0.63
RNF10-223	ENST00000545419	BRD4	O60885	1362 aa	Predicted RBP	11.09	□□□□□ -0.63
RNF10-223	ENST00000545419	ATP7B	P35670	1465 aa		11.09	□□□□□ -0.63
RNF10-223	ENST00000545419	LMOD2	Q6P5Q4	547 aa		11.09	□□□□□ -0.63
RNF10-223	ENST00000545419	FAM83G	A6ND36	823 aa		11.08	□□□□□ -0.64
RNF10-223	ENST00000545419	ATMIN	O43313	823 aa	Predicted RBP	11.08	□□□□□ -0.64
RNF10-223	ENST00000545419	RXRB	P28702	533 aa		11.08	□□□□□ -0.64
RNF10-223	ENST00000545419	ASTL	Q6HA08	431 aa	Predicted RBP	11.08	□□□□□ -0.64
RNF10-223	ENST00000545419	CABLES1	Q8TDN4	633 aa		11.08	□□□□□ -0.64
RNF10-223	ENST00000545419	AFF2	P51816	1311 aa		11.07	□□□□□ -0.64
RNF10-223	ENST00000545419	TNS3	Q68CZ2	1445 aa		11.07	□□□□□ -0.64
RNF10-223	ENST00000545419	ATN1	P54259	1190 aa	Predicted RBP	11.07	□□□□□ -0.64
RNF10-223	ENST00000545419	USP21	Q9UK80	565 aa		11.07	□□□□□ -0.64
RNF10-223	ENST00000545419	PPIP5K1	Q6PFW1	1433 aa		11.06	□□□□□ -0.64
RNF10-223	ENST00000545419	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.06	□□□□□ -0.64
RNF10-223	ENST00000545419	ABTB2	Q8N961	1025 aa		11.06	□□□□□ -0.64
RNF10-223	ENST00000545419	SLC12A5	Q9H2X9	1139 aa		11.06	□□□□□ -0.64
RNF10-223	ENST00000545419	RBM6	P78332	1123 aa	Known RBP	11.05	□□□□□ -0.64
RNF10-223	ENST00000545419	NLRP13	Q86W25	1043 aa		11.05	□□□□□ -0.64
RNF10-223	ENST00000545419	TRPC5	Q9UL62	973 aa	Predicted RBP	11.05	□□□□□ -0.64
RNF10-223	ENST00000545419	ATAD2	Q6PL18	1390 aa		11.05	□□□□□ -0.64
RNF10-223	ENST00000545419	PPP1R37	O75864	691 aa		11.04	□□□□□ -0.64
RNF10-223	ENST00000545419	IER5L	Q5T953	404 aa		11.04	□□□□□ -0.64
RNF10-223	ENST00000545419	UNC5CL	Q8IV45	518 aa		11.04	□□□□□ -0.64
RNF10-223	ENST00000545419	QRICH2	Q9H0J4	1663 aa		11.03	□□□□□ -0.64
RNF10-223	ENST00000545419	BCL9L	Q86UU0	1499 aa		11.03	□□□□□ -0.64
RNF10-223	ENST00000545419	CPSF1	Q10570	1443 aa	Known RBP	11.03	□□□□□ -0.64
RNF10-223	ENST00000545419	SSH2	Q76I76	1423 aa		11.03	□□□□□ -0.64
RNF10-223	ENST00000545419	TMF1	P82094	1093 aa		11.03	□□□□□ -0.64
RNF10-223	ENST00000545419	CDCA8	Q53HL2	280 aa		11.03	□□□□□ -0.64
RNF10-223	ENST00000545419	MS4A4A	Q96JQ5	239 aa		11.03	□□□□□ -0.64
RNF10-223	ENST00000545419	TTC21B	Q7Z4L5	1316 aa		11.02	□□□□□ -0.65
RNF10-223	ENST00000545419	ONECUT3	O60422	494 aa	Predicted RBP	11.02	□□□□□ -0.65
RNF10-223	ENST00000545419	GC	P02774	474 aa		11.02	□□□□□ -0.65
RNF10-223	ENST00000545419	SP7	Q8TDD2	431 aa	Predicted RBP	11.02	□□□□□ -0.65
RNF10-223	ENST00000545419	TMC1	Q8TDI8	760 aa		11.02	□□□□□ -0.65
RNF10-223	ENST00000545419	GJD4	Q96KN9	370 aa	Predicted RBP	11.02	□□□□□ -0.65
RNF10-223	ENST00000545419	WDR70	Q9NW82	654 aa		11.02	□□□□□ -0.65
RNF10-223	ENST00000545419	TERF2IP	Q9NYB0	399 aa		11.02	□□□□□ -0.65
RNF10-223	ENST00000545419	USP47	Q96K76	1375 aa		11.01	□□□□□ -0.65
RNF10-223	ENST00000545419	TRPM3	Q9HCF6	1732 aa	Predicted RBP	11.01	□□□□□ -0.65
RNF10-223	ENST00000545419	TTC21A	Q8NDW8	1320 aa		11.01	□□□□□ -0.65
RNF10-223	ENST00000545419	NUTM2G	Q5VZR2	741 aa		11.01	□□□□□ -0.65
RNF10-223	ENST00000545419	USP6	P35125	1406 aa		11	□□□□□ -0.65
RNF10-223	ENST00000545419	ITSN1	Q15811	1721 aa		11	□□□□□ -0.65
RNF10-223	ENST00000545419	EIF4G2	P78344	907 aa	Known RBP eCLIP	11	□□□□□ -0.65
RNF10-223	ENST00000545419	VPS72	Q15906	364 aa		11	□□□□□ -0.65
RNF10-223	ENST00000545419	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11	□□□□□ -0.65
RNF10-223	ENST00000545419	ALS2	Q96Q42	1657 aa		10.99	□□□□□ -0.65
RNF10-223	ENST00000545419	KTN1	Q86UP2	1357 aa	Known RBP	10.99	□□□□□ -0.65
RNF10-223	ENST00000545419	USP19	O94966	1318 aa		10.99	□□□□□ -0.65
RNF10-223	ENST00000545419	SLIT2	O94813	1529 aa		10.99	□□□□□ -0.65
RNF10-223	ENST00000545419	OCEL1	Q9H607	264 aa		10.99	□□□□□ -0.65
RNF10-223	ENST00000545419	TOPAZ1	Q8N9V7	1692 aa		10.99	□□□□□ -0.65
RNF10-223	ENST00000545419	ATRN	O75882	1429 aa		10.99	□□□□□ -0.65
RNF10-223	ENST00000545419	ZC3H6	P61129	1189 aa	Known RBP	10.98	□□□□□ -0.65
RNF10-223	ENST00000545419	KCNH5	Q8NCM2	988 aa		10.98	□□□□□ -0.65
RNF10-223	ENST00000545419	BTG4	Q9NY30	223 aa		10.98	□□□□□ -0.65
RNF10-223	ENST00000545419	NINL	Q9Y2I6	1382 aa		10.98	□□□□□ -0.65
RNF10-223	ENST00000545419	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.97	□□□□□ -0.65
RNF10-223	ENST00000545419		G3V3G9	751 aa		10.97	□□□□□ -0.65
RNF10-223	ENST00000545419	PLCG2	P16885	1265 aa		10.97	□□□□□ -0.65
RNF10-223	ENST00000545419	PRDM11	Q9NQV5	511 aa		10.97	□□□□□ -0.65
RNF10-223	ENST00000545419	CPD	O75976	1380 aa		10.97	□□□□□ -0.65
RNF10-223	ENST00000545419	SEC24B	O95487	1268 aa		10.96	□□□□□ -0.65
RNF10-223	ENST00000545419	HSPA5	P11021	654 aa	Known RBP	10.96	□□□□□ -0.65
RNF10-223	ENST00000545419	USP31	Q70CQ4	1352 aa		10.96	□□□□□ -0.66
RNF10-223	ENST00000545419	KIAA0232	Q92628	1395 aa		10.96	□□□□□ -0.66
RNF10-223	ENST00000545419	CD163L1	Q9NR16	1453 aa		10.95	□□□□□ -0.66
RNF10-223	ENST00000545419	IRX5	P78411	483 aa	Predicted RBP	10.95	□□□□□ -0.66
RNF10-223	ENST00000545419	CHRNA2	Q15822	529 aa		10.95	□□□□□ -0.66
RNF10-223	ENST00000545419	ARHGEF25	Q86VW2	580 aa		10.95	□□□□□ -0.66
RNF10-223	ENST00000545419	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.95	□□□□□ -0.66
RNF10-223	ENST00000545419	SLC39A7	Q92504	469 aa		10.95	□□□□□ -0.66
RNF10-223	ENST00000545419	MARF1	Q9Y4F3	1742 aa	Known RBP	10.95	□□□□□ -0.66
RNF10-223	ENST00000545419	EVA1C	P58658	441 aa		10.94	□□□□□ -0.66

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