RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 CENPQQ7L2Z9 268 aaPredicted RBP21.42■■□□□ 1.02
CHFR-224ENST00000545046 BCL2L13Q9BXK5 485 aa21.42■■□□□ 1.02
CHFR-224ENST00000545046 PANK1Q8TE04 598 aa21.41■■□□□ 1.02
CHFR-224ENST00000545046 RBM33Q96EV2 1170 aaKnown RBP21.41■■□□□ 1.02
CHFR-224ENST00000545046 MAP3K19Q56UN5 1328 aa21.41■■□□□ 1.02
CHFR-224ENST00000545046 SBNO1A3KN83 1393 aa21.41■■□□□ 1.02
CHFR-224ENST00000545046 SULT6B1Q6IMI4 303 aa21.4■■□□□ 1.02
CHFR-224ENST00000545046 C14orf37Q86TY3 774 aa21.4■■□□□ 1.02
CHFR-224ENST00000545046 USP54Q70EL1 1684 aa21.4■■□□□ 1.02
CHFR-224ENST00000545046 PAK3O75914 559 aaPredicted RBP21.4■■□□□ 1.02
CHFR-224ENST00000545046 KDM2BQ8NHM5 1336 aa21.4■■□□□ 1.02
CHFR-224ENST00000545046 FLT4P35916 1363 aa21.4■■□□□ 1.02
CHFR-224ENST00000545046 RGPD1P0DJD0 1748 aa21.39■■□□□ 1.01
CHFR-224ENST00000545046 AMPHP49418 695 aa21.39■■□□□ 1.01
CHFR-224ENST00000545046 ABTB2Q8N961 1025 aa21.39■■□□□ 1.01
CHFR-224ENST00000545046 COG6Q9Y2V7 657 aa21.39■■□□□ 1.01
CHFR-224ENST00000545046 LAS1LQ9Y4W2 734 aaKnown RBP21.39■■□□□ 1.01
CHFR-224ENST00000545046 MS4A1P11836 297 aa21.38■■□□□ 1.01
CHFR-224ENST00000545046 GNAI1P63096 354 aa21.38■■□□□ 1.01
CHFR-224ENST00000545046 SMC4Q9NTJ3 1288 aa21.38■■□□□ 1.01
CHFR-224ENST00000545046 AAMPQ13685 434 aa21.38■■□□□ 1.01
CHFR-224ENST00000545046 NWD1Q149M9 1564 aa21.37■■□□□ 1.01
CHFR-224ENST00000545046 ZKSCAN2Q63HK3 967 aa21.37■■□□□ 1.01
CHFR-224ENST00000545046 MARF1Q9Y4F3 1742 aaKnown RBP21.37■■□□□ 1.01
CHFR-224ENST00000545046 AEBP1Q8IUX7 1158 aa21.37■■□□□ 1.01
CHFR-224ENST00000545046 IFT57Q9NWB7 429 aa21.37■■□□□ 1.01
CHFR-224ENST00000545046 ESCO1Q5FWF5 840 aa21.36■■□□□ 1.01
CHFR-224ENST00000545046 CLUAP1Q96AJ1 413 aa21.36■■□□□ 1.01
CHFR-224ENST00000545046 ARHGEF10O15013 1369 aa21.35■■□□□ 1.01
CHFR-224ENST00000545046 NUTM2GQ5VZR2 741 aa21.35■■□□□ 1.01
CHFR-224ENST00000545046 SSH1Q8WYL5 1049 aa21.34■■□□□ 1.01
CHFR-224ENST00000545046 THUMPD2Q9BTF0 503 aaKnown RBP21.34■■□□□ 1.01
CHFR-224ENST00000545046 KIF24Q5T7B8 1368 aa21.34■■□□□ 1.01
CHFR-224ENST00000545046 PSME1Q06323 249 aa21.34■■□□□ 1.01
CHFR-224ENST00000545046 ZNF428Q96B54 188 aa21.34■■□□□ 1.01
CHFR-224ENST00000545046 ALDH1L2Q3SY69 923 aa21.33■■□□□ 1.01
CHFR-224ENST00000545046 PROSER2Q86WR7 435 aaPredicted RBP21.33■■□□□ 1.01
CHFR-224ENST00000545046 ZNF853P0CG23 659 aa21.32■■□□□ 1
CHFR-224ENST00000545046 RLBP1P12271 317 aa21.32■■□□□ 1
CHFR-224ENST00000545046 FTSJ3Q8IY81 847 aaKnown RBP21.32■■□□□ 1
CHFR-224ENST00000545046 DZIP1LQ8IYY4 767 aaKnown RBP21.32■■□□□ 1
CHFR-224ENST00000545046 CFAP44Q96MT7 982 aa21.32■■□□□ 1
CHFR-224ENST00000545046 TNNQ9UQP3 1299 aa21.32■■□□□ 1
CHFR-224ENST00000545046 KIF16BQ96L93 1317 aa21.3■■□□□ 1
CHFR-224ENST00000545046 FAM83GA6ND36 823 aa21.3■■□□□ 1
CHFR-224ENST00000545046 IPO8O15397 1037 aaKnown RBP21.3■■□□□ 1
CHFR-224ENST00000545046 MBIPQ9NS73 344 aa21.3■■□□□ 1
CHFR-224ENST00000545046 HOXC9P31274 260 aa21.29■■□□□ 1
CHFR-224ENST00000545046 MVPQ14764 893 aaKnown RBP21.29■■□□□ 1
CHFR-224ENST00000545046 ATF7IPQ6VMQ6 1270 aa21.28■■□□□ 1
CHFR-224ENST00000545046 NOB1Q9ULX3 412 aaKnown RBP21.28■■□□□ 1
CHFR-224ENST00000545046 IGSF1Q8N6C5 1336 aa21.28■■□□□ 1
CHFR-224ENST00000545046 DCTN1Q14203 1278 aa21.27■■□□□ 1
CHFR-224ENST00000545046 EYA1Q99502 592 aa21.27■■□□□ 1
CHFR-224ENST00000545046 LTN1O94822 1766 aa21.27■■□□□ 1
CHFR-224ENST00000545046 KDRP35968 1356 aa21.26■□□□□ 0.99
CHFR-224ENST00000545046 VAMP4O75379 141 aa21.26■□□□□ 0.99
CHFR-224ENST00000545046 TRIM27P14373 513 aa21.26■□□□□ 0.99
CHFR-224ENST00000545046 BRPF1P55201 1214 aaPredicted RBP21.26■□□□□ 0.99
CHFR-224ENST00000545046 RTL1A6NKG5 1358 aa21.25■□□□□ 0.99
CHFR-224ENST00000545046 IGHDP01880 384 aa21.25■□□□□ 0.99
CHFR-224ENST00000545046 ORAI2Q96SN7 254 aa21.25■□□□□ 0.99
CHFR-224ENST00000545046 C19orf44Q9H6X5 657 aa21.24■□□□□ 0.99
CHFR-224ENST00000545046 PDE4AP27815 886 aa21.24■□□□□ 0.99
CHFR-224ENST00000545046 KCNH5Q8NCM2 988 aa21.24■□□□□ 0.99
CHFR-224ENST00000545046 TWISTNBQ3B726 338 aaPredicted RBP21.23■□□□□ 0.99
CHFR-224ENST00000545046 SKAP1Q86WV1 359 aa21.23■□□□□ 0.99
CHFR-224ENST00000545046 DDX19BQ9UMR2 479 aa21.23■□□□□ 0.99
CHFR-224ENST00000545046 TSPYL6Q8N831 410 aa21.23■□□□□ 0.99
CHFR-224ENST00000545046 FOXO3O43524 673 aa21.22■□□□□ 0.99
CHFR-224ENST00000545046 MCM10Q7L590 875 aa21.22■□□□□ 0.99
CHFR-224ENST00000545046 GAS2L2Q8NHY3 880 aa21.22■□□□□ 0.99
CHFR-224ENST00000545046 KIF1AQ12756 1690 aa21.22■□□□□ 0.99
CHFR-224ENST00000545046 MTHFSDQ2M296 383 aaKnown RBP21.21■□□□□ 0.99
CHFR-224ENST00000545046 RTF1Q92541 710 aaKnown RBP21.21■□□□□ 0.99
CHFR-224ENST00000545046 ELL2O00472 640 aaPredicted RBP21.21■□□□□ 0.99
CHFR-224ENST00000545046 ITPRIPQ8IWB1 547 aa21.21■□□□□ 0.99
CHFR-224ENST00000545046 BACH2Q9BYV9 841 aa21.21■□□□□ 0.99
CHFR-224ENST00000545046 MRPL50Q8N5N7 158 aaKnown RBP21.2■□□□□ 0.98
CHFR-224ENST00000545046 C8orf58Q8NAV2 365 aa21.2■□□□□ 0.98
CHFR-224ENST00000545046 IP6K1Q92551 441 aa21.2■□□□□ 0.98
CHFR-224ENST00000545046 LTV1Q96GA3 475 aaPredicted RBP21.2■□□□□ 0.98
CHFR-224ENST00000545046 NFAT5O94916 1531 aa21.2■□□□□ 0.98
CHFR-224ENST00000545046 CHL1O00533 1208 aa21.2■□□□□ 0.98
CHFR-224ENST00000545046 HAP1P54257 671 aaPredicted RBP21.2■□□□□ 0.98
CHFR-224ENST00000545046 RWDD1Q9H446 243 aaPredicted RBP21.2■□□□□ 0.98
CHFR-224ENST00000545046 PCDHB15Q9Y5E8 787 aa21.2■□□□□ 0.98
CHFR-224ENST00000545046 C1orf167Q5SNV9 1468 aa21.19■□□□□ 0.98
CHFR-224ENST00000545046 ARHGAP45Q92619 1136 aa21.19■□□□□ 0.98
CHFR-224ENST00000545046 ATF3P18847 181 aa21.18■□□□□ 0.98
CHFR-224ENST00000545046 TMEM57Q8N5G2 664 aa21.18■□□□□ 0.98
CHFR-224ENST00000545046 KRT28Q7Z3Y7 464 aa21.17■□□□□ 0.98
CHFR-224ENST00000545046 STRCP1A6NGW2 1772 aa21.17■□□□□ 0.98
CHFR-224ENST00000545046 HTATSF1O43719 755 aaKnown RBP21.17■□□□□ 0.98
CHFR-224ENST00000545046 XPCQ01831 940 aaPredicted RBP21.17■□□□□ 0.98
CHFR-224ENST00000545046 NCOA3Q9Y6Q9 1424 aa21.16■□□□□ 0.98
CHFR-224ENST00000545046 RGS3P49796 1198 aa21.16■□□□□ 0.98
CHFR-224ENST00000545046 TRPM3Q9HCF6 1732 aaPredicted RBP21.16■□□□□ 0.98
CHFR-224ENST00000545046 CRB1P82279 1406 aa21.16■□□□□ 0.98
CHFR-224ENST00000545046 PHRF1Q9P1Y6 1649 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms