RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 CCDC27Q2M243 656 aa14.96□□□□□ -0.01
TNC-213ENST00000544972 PNNQ9H307 717 aaKnown RBP14.96□□□□□ -0.01
TNC-213ENST00000544972 SPINK5Q9NQ38 1064 aaPredicted RBP14.96□□□□□ -0.01
TNC-213ENST00000544972 HOXC9P31274 260 aa14.96□□□□□ -0.01
TNC-213ENST00000544972 AMPHP49418 695 aa14.96□□□□□ -0.01
TNC-213ENST00000544972 SLFN5Q08AF3 891 aa14.96□□□□□ -0.01
TNC-213ENST00000544972 TRMT2AQ8IZ69 625 aaKnown RBP14.96□□□□□ -0.01
TNC-213ENST00000544972 LTBP4Q8N2S1 1624 aa14.95□□□□□ -0.02
TNC-213ENST00000544972 TMPOP42166 694 aaKnown RBP14.95□□□□□ -0.02
TNC-213ENST00000544972 DUSP27Q5VZP5 1158 aa14.95□□□□□ -0.02
TNC-213ENST00000544972 KCNH5Q8NCM2 988 aa14.95□□□□□ -0.02
TNC-213ENST00000544972 PHRF1Q9P1Y6 1649 aaKnown RBP14.95□□□□□ -0.02
TNC-213ENST00000544972 MAPK8IP3Q9UPT6 1336 aa14.94□□□□□ -0.02
TNC-213ENST00000544972 GCP02774 474 aa14.94□□□□□ -0.02
TNC-213ENST00000544972 LMOD2Q6P5Q4 547 aa14.94□□□□□ -0.02
TNC-213ENST00000544972 PHACTR3Q96KR7 559 aa14.94□□□□□ -0.02
TNC-213ENST00000544972 RTL1A6NKG5 1358 aa14.94□□□□□ -0.02
TNC-213ENST00000544972 MED1Q15648 1581 aaPredicted RBP14.94□□□□□ -0.02
TNC-213ENST00000544972 RNF123Q5XPI4 1314 aa14.93□□□□□ -0.02
TNC-213ENST00000544972 AEBP1Q8IUX7 1158 aa14.93□□□□□ -0.02
TNC-213ENST00000544972 TNS3Q68CZ2 1445 aa14.93□□□□□ -0.02
TNC-213ENST00000544972 TRIM35Q9UPQ4 493 aa14.92□□□□□ -0.02
TNC-213ENST00000544972 SPATA31A3Q5VYP0 1347 aa14.92□□□□□ -0.02
TNC-213ENST00000544972 FKBP8Q14318 412 aa14.92□□□□□ -0.02
TNC-213ENST00000544972 SULT6B1Q6IMI4 303 aa14.92□□□□□ -0.02
TNC-213ENST00000544972 ARHGEF25Q86VW2 580 aa14.92□□□□□ -0.02
TNC-213ENST00000544972 WDR63Q8IWG1 891 aa14.92□□□□□ -0.02
TNC-213ENST00000544972 IP6K1Q92551 441 aa14.92□□□□□ -0.02
TNC-213ENST00000544972 ARHGEF10O15013 1369 aa14.91□□□□□ -0.02
TNC-213ENST00000544972 E9PSI1 815 aa14.91□□□□□ -0.02
TNC-213ENST00000544972 SOS2Q07890 1332 aaPredicted RBP14.9□□□□□ -0.02
TNC-213ENST00000544972 IGSF1Q8N6C5 1336 aa14.9□□□□□ -0.02
TNC-213ENST00000544972 RIPK4P57078 832 aa14.9□□□□□ -0.02
TNC-213ENST00000544972 EYA1Q99502 592 aa14.9□□□□□ -0.02
TNC-213ENST00000544972 KDRP35968 1356 aa14.9□□□□□ -0.02
TNC-213ENST00000544972 CRYBG1Q9Y4K1 1723 aa14.9□□□□□ -0.02
TNC-213ENST00000544972 NEFLP07196 543 aa14.89□□□□□ -0.03
TNC-213ENST00000544972 RCAN3Q9UKA8 241 aa14.89□□□□□ -0.03
TNC-213ENST00000544972 NHSL1Q5SYE7 1610 aa14.89□□□□□ -0.03
TNC-213ENST00000544972 PLEKHG5O94827 1062 aa14.89□□□□□ -0.03
TNC-213ENST00000544972 NFE2L2Q16236 605 aa14.89□□□□□ -0.03
TNC-213ENST00000544972 DLG5Q8TDM6 1919 aa14.88□□□□□ -0.03
TNC-213ENST00000544972 NEFMP07197 916 aa14.88□□□□□ -0.03
TNC-213ENST00000544972 IRX6P78412 446 aaPredicted RBP14.87□□□□□ -0.03
TNC-213ENST00000544972 CABLES1Q8TDN4 633 aa14.86□□□□□ -0.03
TNC-213ENST00000544972 LTV1Q96GA3 475 aaPredicted RBP14.86□□□□□ -0.03
TNC-213ENST00000544972 ZBTB7CA1YPR0 619 aa14.85□□□□□ -0.03
TNC-213ENST00000544972 ZC3H6P61129 1189 aaKnown RBP14.85□□□□□ -0.03
TNC-213ENST00000544972 AXIN2Q9Y2T1 843 aa14.85□□□□□ -0.03
TNC-213ENST00000544972 RGPD2P0DJD1 1756 aa14.84□□□□□ -0.03
TNC-213ENST00000544972 RGPD5Q99666 1765 aa14.84□□□□□ -0.03
TNC-213ENST00000544972 COL18A1P39060 1754 aa14.84□□□□□ -0.03
TNC-213ENST00000544972 IL16Q14005 1332 aa14.84□□□□□ -0.03
TNC-213ENST00000544972 NBPF6Q5VWK0 638 aa14.83□□□□□ -0.04
TNC-213ENST00000544972 NBPF4Q96M43 638 aa14.83□□□□□ -0.04
TNC-213ENST00000544972 ROBO1Q9Y6N7 1651 aa14.83□□□□□ -0.04
TNC-213ENST00000544972 RRP1P56182 461 aaKnown RBP14.82□□□□□ -0.04
TNC-213ENST00000544972 USHBP1Q8N6Y0 703 aa14.81□□□□□ -0.04
TNC-213ENST00000544972 THUMPD2Q9BTF0 503 aaKnown RBP14.81□□□□□ -0.04
TNC-213ENST00000544972 MYH16Q9H6N6 1097 aa14.81□□□□□ -0.04
TNC-213ENST00000544972 NCAPD2Q15021 1401 aa14.81□□□□□ -0.04
TNC-213ENST00000544972 CAMTA1Q9Y6Y1 1673 aa14.81□□□□□ -0.04
TNC-213ENST00000544972 ABCA3Q99758 1704 aa14.8□□□□□ -0.04
TNC-213ENST00000544972 FAM83GA6ND36 823 aa14.8□□□□□ -0.04
TNC-213ENST00000544972 MTHFSDQ2M296 383 aaKnown RBP14.8□□□□□ -0.04
TNC-213ENST00000544972 ANKRD24Q8TF21 1146 aa14.8□□□□□ -0.04
TNC-213ENST00000544972 LRRC59Q96AG4 307 aaKnown RBP14.8□□□□□ -0.04
TNC-213ENST00000544972 FANCIQ9NVI1 1328 aa14.8□□□□□ -0.04
TNC-213ENST00000544972 CPDO75976 1380 aa14.8□□□□□ -0.04
TNC-213ENST00000544972 LMOD3Q0VAK6 560 aa14.8□□□□□ -0.04
TNC-213ENST00000544972 TSR2Q969E8 191 aaKnown RBP14.8□□□□□ -0.04
TNC-213ENST00000544972 ABCC6O95255 1503 aa14.8□□□□□ -0.04
TNC-213ENST00000544972 AHDC1Q5TGY3 1603 aaPredicted RBP14.79□□□□□ -0.04
TNC-213ENST00000544972 ERICH6BQ5W0A0 696 aa14.79□□□□□ -0.04
TNC-213ENST00000544972 ERBB3P21860 1342 aa14.79□□□□□ -0.04
TNC-213ENST00000544972 KIAA0232Q92628 1395 aa14.79□□□□□ -0.04
TNC-213ENST00000544972 LMO7Q8WWI1 1683 aa14.78□□□□□ -0.04
TNC-213ENST00000544972 DCTN1Q14203 1278 aa14.78□□□□□ -0.04
TNC-213ENST00000544972 ZNF853P0CG23 659 aa14.78□□□□□ -0.04
TNC-213ENST00000544972 CHRNA2Q15822 529 aa14.78□□□□□ -0.04
TNC-213ENST00000544972 PLIN1O60240 522 aa14.77□□□□□ -0.05
TNC-213ENST00000544972 CALD1Q05682 793 aaKnown RBP14.76□□□□□ -0.05
TNC-213ENST00000544972 GAS2L2Q8NHY3 880 aa14.76□□□□□ -0.05
TNC-213ENST00000544972 EXOSC9Q06265 439 aaKnown RBP14.76□□□□□ -0.05
TNC-213ENST00000544972 IFT57Q9NWB7 429 aa14.76□□□□□ -0.05
TNC-213ENST00000544972 BCAR3O75815 825 aa14.75□□□□□ -0.05
TNC-213ENST00000544972 MCM10Q7L590 875 aa14.75□□□□□ -0.05
TNC-213ENST00000544972 RARSP54136 660 aaKnown RBP14.74□□□□□ -0.05
TNC-213ENST00000544972 GNAI1P63096 354 aa14.74□□□□□ -0.05
TNC-213ENST00000544972 CFAP44Q96MT7 982 aa14.74□□□□□ -0.05
TNC-213ENST00000544972 FAM208AQ9UK61 1670 aaKnown RBP14.74□□□□□ -0.05
TNC-213ENST00000544972 CT47B1P0C2W7 299 aaPredicted RBP14.73□□□□□ -0.05
TNC-213ENST00000544972 MBIPQ9NS73 344 aa14.73□□□□□ -0.05
TNC-213ENST00000544972 LAS1LQ9Y4W2 734 aaKnown RBP14.73□□□□□ -0.05
TNC-213ENST00000544972 CRB1P82279 1406 aa14.73□□□□□ -0.05
TNC-213ENST00000544972 HTATSF1O43719 755 aaKnown RBP14.73□□□□□ -0.05
TNC-213ENST00000544972 AEBP2Q6ZN18 517 aaPredicted RBP14.72□□□□□ -0.05
TNC-213ENST00000544972 PRDM11Q9NQV5 511 aa14.72□□□□□ -0.05
TNC-213ENST00000544972 LRRC37A3O60309 1634 aa14.72□□□□□ -0.05
TNC-213ENST00000544972 COL22A1Q8NFW1 1626 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms