RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ZMIZ1Q9ULJ6 1067 aa6.57□□□□□ -1.36
SCFD1-207ENST00000544052 BRD1O95696 1058 aa6.57□□□□□ -1.36
SCFD1-207ENST00000544052 NCOA4Q13772 614 aa6.57□□□□□ -1.36
SCFD1-207ENST00000544052 SLFNL1Q499Z3 407 aa6.57□□□□□ -1.36
SCFD1-207ENST00000544052 SPRYD7Q5W111 196 aa6.57□□□□□ -1.36
SCFD1-207ENST00000544052 PHTF2Q8N3S3 785 aa6.57□□□□□ -1.36
SCFD1-207ENST00000544052 NFATC2IPQ8NCF5 419 aa6.57□□□□□ -1.36
SCFD1-207ENST00000544052 STK32AQ8WU08 396 aa6.57□□□□□ -1.36
SCFD1-207ENST00000544052 EMID1Q96A84 441 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-207ENST00000544052 CARD14Q9BXL6 1004 aa6.57□□□□□ -1.36
SCFD1-207ENST00000544052 MAGEB6P1A0A0J9YX57 407 aa6.56□□□□□ -1.36
SCFD1-207ENST00000544052 TRIM67Q6ZTA4 783 aa6.56□□□□□ -1.36
SCFD1-207ENST00000544052 SH3BP5LQ7L8J4 393 aa6.56□□□□□ -1.36
SCFD1-207ENST00000544052 ZBTB33Q86T24 672 aa6.56□□□□□ -1.36
SCFD1-207ENST00000544052 ZNF598Q86UK7 904 aaKnown RBP6.56□□□□□ -1.36
SCFD1-207ENST00000544052 MKRN1Q9UHC7 482 aaKnown RBP6.56□□□□□ -1.36
SCFD1-207ENST00000544052 PPEF1O14829 653 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-207ENST00000544052 CRTC2Q53ET0 693 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-207ENST00000544052 TMEM164Q5U3C3 297 aa6.56□□□□□ -1.36
SCFD1-207ENST00000544052 RNF135Q8IUD6 432 aa6.56□□□□□ -1.36
SCFD1-207ENST00000544052 BAP1Q92560 729 aa6.56□□□□□ -1.36
SCFD1-207ENST00000544052 LINC01559Q495D7 138 aa6.55□□□□□ -1.36
SCFD1-207ENST00000544052 ZNF787Q6DD87 383 aa6.55□□□□□ -1.36
SCFD1-207ENST00000544052 SH3RF1Q7Z6J0 888 aa6.55□□□□□ -1.36
SCFD1-207ENST00000544052 PLEKHM2Q8IWE5 1019 aa6.55□□□□□ -1.36
SCFD1-207ENST00000544052 PLPP7Q8NBV4 271 aa6.55□□□□□ -1.36
SCFD1-207ENST00000544052 FCF1Q9Y324 198 aaKnown RBP6.55□□□□□ -1.36
SCFD1-207ENST00000544052 PRR20EP86478 221 aa6.54□□□□□ -1.36
SCFD1-207ENST00000544052 PRR20CP86479 221 aa6.54□□□□□ -1.36
SCFD1-207ENST00000544052 PRR20DP86480 221 aa6.54□□□□□ -1.36
SCFD1-207ENST00000544052 PRR20BP86481 221 aa6.54□□□□□ -1.36
SCFD1-207ENST00000544052 PRR20AP86496 221 aa6.54□□□□□ -1.36
SCFD1-207ENST00000544052 FOXJ1Q92949 421 aa6.54□□□□□ -1.36
SCFD1-207ENST00000544052 NOVA2Q9UNW9 492 aaKnown RBP6.54□□□□□ -1.36
SCFD1-207ENST00000544052 PKDCCQ504Y2 493 aa6.54□□□□□ -1.36
SCFD1-207ENST00000544052 C4orf48Q5BLP8 95 aa6.54□□□□□ -1.36
SCFD1-207ENST00000544052 ZNF697Q5TEC3 545 aa6.54□□□□□ -1.36
SCFD1-207ENST00000544052 LIAT1Q6ZQX7 453 aa6.54□□□□□ -1.36
SCFD1-207ENST00000544052 DGAT1O75907 488 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 AGERQ15109 404 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 TMCO4Q5TGY1 634 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 NPM2Q86SE8 214 aaKnown RBP6.53□□□□□ -1.36
SCFD1-207ENST00000544052 DZIP3Q86Y13 1208 aaKnown RBP6.53□□□□□ -1.36
SCFD1-207ENST00000544052 USP17L15C9J2P7 530 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 USP17L10C9JJH3 530 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 USP17L13C9JLJ4 530 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 USP17L12C9JPN9 530 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 USP17L11C9JVI0 530 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 USP17L21D6R901 530 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 USP17L18D6R9N7 530 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 USP17L22D6RA61 530 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 USP17L17D6RBQ6 530 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 USP17L19D6RCP7 530 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 USP17L20D6RJB6 530 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 RASA1P20936 1047 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 USP17L24Q0WX57 530 aa6.53□□□□□ -1.36
SCFD1-207ENST00000544052 ELOAQ14241 798 aaKnown RBP6.53□□□□□ -1.36
SCFD1-207ENST00000544052 GIGYF1O75420 1035 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-207ENST00000544052 KCNA1Q09470 495 aa6.52□□□□□ -1.37
SCFD1-207ENST00000544052 PTK7Q13308 1070 aa6.52□□□□□ -1.37
SCFD1-207ENST00000544052 ERFEQ4G0M1 354 aa6.52□□□□□ -1.37
SCFD1-207ENST00000544052 ZNF511Q8NB15 262 aa6.52□□□□□ -1.37
SCFD1-207ENST00000544052 CCDC85AQ96PX6 553 aaPredicted RBP6.52□□□□□ -1.37
SCFD1-207ENST00000544052 CHIC2Q9UKJ5 165 aa6.52□□□□□ -1.37
SCFD1-207ENST00000544052 FAM196BA6NMK8 535 aa6.51□□□□□ -1.37
SCFD1-207ENST00000544052 MCCD1P59942 119 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-207ENST00000544052 CLDN10P78369 228 aa6.51□□□□□ -1.37
SCFD1-207ENST00000544052 IVNS1ABPQ9Y6Y0 642 aa6.51□□□□□ -1.37
SCFD1-207ENST00000544052 MFAP1P55081 439 aaKnown RBP6.51□□□□□ -1.37
SCFD1-207ENST00000544052 BPHLQ86WA6 291 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-207ENST00000544052 ZNF592Q92610 1267 aa6.51□□□□□ -1.37
SCFD1-207ENST00000544052 ZNF594Q96JF6 807 aaPredicted RBP6.51□□□□□ -1.37
SCFD1-207ENST00000544052 SLAIN2Q9P270 581 aa6.51□□□□□ -1.37
SCFD1-207ENST00000544052 ATP5J2-PTCD1G3V325 749 aa6.5□□□□□ -1.37
SCFD1-207ENST00000544052 MYT1Q01538 1121 aa6.5□□□□□ -1.37
SCFD1-207ENST00000544052 PHLDB3Q6NSJ2 640 aa6.5□□□□□ -1.37
SCFD1-207ENST00000544052 LARP1Q6PKG0 1096 aaKnown RBP6.5□□□□□ -1.37
SCFD1-207ENST00000544052 OGFOD1Q8N543 542 aa6.5□□□□□ -1.37
SCFD1-207ENST00000544052 GDF9O60383 454 aa6.49□□□□□ -1.37
SCFD1-207ENST00000544052 SH3BP2P78314 561 aa6.49□□□□□ -1.37
SCFD1-207ENST00000544052 FAM69CQ0P6D2 419 aa6.49□□□□□ -1.37
SCFD1-207ENST00000544052 EML3Q32P44 896 aa6.49□□□□□ -1.37
SCFD1-207ENST00000544052 MAP7D1Q3KQU3 841 aa6.49□□□□□ -1.37
SCFD1-207ENST00000544052 PLA2G2CQ5R387 149 aa6.49□□□□□ -1.37
SCFD1-207ENST00000544052 CDCA7Q9BWT1 371 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-207ENST00000544052 TNFRSF10AO00220 468 aa6.49□□□□□ -1.37
SCFD1-207ENST00000544052 OXLD1Q5BKU9 147 aa6.49□□□□□ -1.37
SCFD1-207ENST00000544052 KIAA1024Q9UPX6 916 aa6.49□□□□□ -1.37
SCFD1-207ENST00000544052 MTMR7Q9Y216 660 aa6.49□□□□□ -1.37
SCFD1-207ENST00000544052 FAM187AA6NFU0 413 aa6.48□□□□□ -1.37
SCFD1-207ENST00000544052 DPYDQ12882 1025 aa6.48□□□□□ -1.37
SCFD1-207ENST00000544052 ANKMY2Q8IV38 441 aa6.48□□□□□ -1.37
SCFD1-207ENST00000544052 RGS22Q8NE09 1264 aa6.48□□□□□ -1.37
SCFD1-207ENST00000544052 FAM200AQ8TCP9 573 aa6.48□□□□□ -1.37
SCFD1-207ENST00000544052 DOLKQ9UPQ8 538 aa6.48□□□□□ -1.37
SCFD1-207ENST00000544052 PATL2C9JE40 543 aaKnown RBP6.48□□□□□ -1.37
SCFD1-207ENST00000544052 SLC10A4Q96EP9 437 aa6.48□□□□□ -1.37
SCFD1-207ENST00000544052 LZTS3O60299 673 aaPredicted RBP6.47□□□□□ -1.37
SCFD1-207ENST00000544052 SCNN1AP37088 669 aa6.47□□□□□ -1.37
SCFD1-207ENST00000544052 ZBTB7BO15156 539 aaPredicted RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms