RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 HSP90AB2PQ58FF8 381 aa25.96■■□□□ 1.75
COPS7A-218ENST00000543939 KIF24Q5T7B8 1368 aa25.96■■□□□ 1.75
COPS7A-218ENST00000543939 TRIM35Q9UPQ4 493 aa25.94■■□□□ 1.74
COPS7A-218ENST00000543939 NEFMP07197 916 aa25.93■■□□□ 1.74
COPS7A-218ENST00000543939 CADPS2Q86UW7 1296 aa25.93■■□□□ 1.74
COPS7A-218ENST00000543939 MSH6P52701 1360 aa25.93■■□□□ 1.74
COPS7A-218ENST00000543939 NFAT5O94916 1531 aa25.92■■□□□ 1.74
COPS7A-218ENST00000543939 LTN1O94822 1766 aa25.91■■□□□ 1.74
COPS7A-218ENST00000543939 AMPHP49418 695 aa25.91■■□□□ 1.74
COPS7A-218ENST00000543939 RIPK4P57078 832 aa25.91■■□□□ 1.74
COPS7A-218ENST00000543939 PHACTR3Q96KR7 559 aa25.91■■□□□ 1.74
COPS7A-218ENST00000543939 PPP4R2Q9NY27 417 aa25.91■■□□□ 1.74
COPS7A-218ENST00000543939 NFE2L2Q16236 605 aa25.89■■□□□ 1.74
COPS7A-218ENST00000543939 KRT28Q7Z3Y7 464 aa25.89■■□□□ 1.74
COPS7A-218ENST00000543939 ZNF335Q9H4Z2 1342 aaPredicted RBP25.89■■□□□ 1.73
COPS7A-218ENST00000543939 XPCQ01831 940 aaPredicted RBP25.88■■□□□ 1.73
COPS7A-218ENST00000543939 DLG5Q8TDM6 1919 aa25.88■■□□□ 1.73
COPS7A-218ENST00000543939 SLIT3O75094 1523 aa25.87■■□□□ 1.73
COPS7A-218ENST00000543939 ARHGEF10O15013 1369 aa25.87■■□□□ 1.73
COPS7A-218ENST00000543939 ALS2Q96Q42 1657 aa25.87■■□□□ 1.73
COPS7A-218ENST00000543939 IL16Q14005 1332 aa25.87■■□□□ 1.73
COPS7A-218ENST00000543939 RTL1A6NKG5 1358 aa25.87■■□□□ 1.73
COPS7A-218ENST00000543939 HOXC9P31274 260 aa25.86■■□□□ 1.73
COPS7A-218ENST00000543939 MYH16Q9H6N6 1097 aa25.86■■□□□ 1.73
COPS7A-218ENST00000543939 SULT6B1Q6IMI4 303 aa25.85■■□□□ 1.73
COPS7A-218ENST00000543939 AEBP1Q8IUX7 1158 aa25.85■■□□□ 1.73
COPS7A-218ENST00000543939 KCNH5Q8NCM2 988 aa25.85■■□□□ 1.73
COPS7A-218ENST00000543939 PHRF1Q9P1Y6 1649 aaKnown RBP25.85■■□□□ 1.73
COPS7A-218ENST00000543939 USP19O94966 1318 aa25.83■■□□□ 1.72
COPS7A-218ENST00000543939 IGSF1Q8N6C5 1336 aa25.82■■□□□ 1.72
COPS7A-218ENST00000543939 KDRP35968 1356 aa25.81■■□□□ 1.72
COPS7A-218ENST00000543939 PLIN1O60240 522 aa25.81■■□□□ 1.72
COPS7A-218ENST00000543939 IP6K1Q92551 441 aa25.8■■□□□ 1.72
COPS7A-218ENST00000543939 EYA1Q99502 592 aa25.8■■□□□ 1.72
COPS7A-218ENST00000543939 NPHP3Q7Z494 1330 aa25.79■■□□□ 1.72
COPS7A-218ENST00000543939 FANCIQ9NVI1 1328 aa25.79■■□□□ 1.72
COPS7A-218ENST00000543939 GCP02774 474 aa25.78■■□□□ 1.72
COPS7A-218ENST00000543939 PXDNQ92626 1479 aa25.77■■□□□ 1.72
COPS7A-218ENST00000543939 LMOD3Q0VAK6 560 aa25.77■■□□□ 1.72
COPS7A-218ENST00000543939 LMOD2Q6P5Q4 547 aa25.77■■□□□ 1.72
COPS7A-218ENST00000543939 DDX17Q92841 729 aaKnown RBP25.77■■□□□ 1.72
COPS7A-218ENST00000543939 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.76■■□□□ 1.71
COPS7A-218ENST00000543939 TSR2Q969E8 191 aaKnown RBP25.75■■□□□ 1.71
COPS7A-218ENST00000543939 MED1Q15648 1581 aaPredicted RBP25.75■■□□□ 1.71
COPS7A-218ENST00000543939 BCAR3O75815 825 aa25.74■■□□□ 1.71
COPS7A-218ENST00000543939 CALD1Q05682 793 aaKnown RBP25.74■■□□□ 1.71
COPS7A-218ENST00000543939 ARHGEF25Q86VW2 580 aa25.74■■□□□ 1.71
COPS7A-218ENST00000543939 EXOC6Q8TAG9 804 aa25.74■■□□□ 1.71
COPS7A-218ENST00000543939 BRINP3Q76B58 766 aa25.73■■□□□ 1.71
COPS7A-218ENST00000543939 PELP1Q8IZL8 1130 aaKnown RBP25.73■■□□□ 1.71
COPS7A-218ENST00000543939 CT47B1P0C2W7 299 aaPredicted RBP25.72■■□□□ 1.71
COPS7A-218ENST00000543939 B4GALNT3Q6L9W6 998 aa25.72■■□□□ 1.71
COPS7A-218ENST00000543939 TNS3Q68CZ2 1445 aa25.72■■□□□ 1.71
COPS7A-218ENST00000543939 RARSP54136 660 aaKnown RBP25.71■■□□□ 1.71
COPS7A-218ENST00000543939 C20orf194Q5TEA3 1177 aa25.71■■□□□ 1.71
COPS7A-218ENST00000543939 THUMPD2Q9BTF0 503 aaKnown RBP25.71■■□□□ 1.71
COPS7A-218ENST00000543939 SLAIN2Q9P270 581 aa25.71■■□□□ 1.71
COPS7A-218ENST00000543939 EXOSC9Q06265 439 aaKnown RBP25.7■■□□□ 1.7
COPS7A-218ENST00000543939 LTV1Q96GA3 475 aaPredicted RBP25.7■■□□□ 1.7
COPS7A-218ENST00000543939 CRBNQ96SW2 442 aa25.68■■□□□ 1.7
COPS7A-218ENST00000543939 IFT57Q9NWB7 429 aa25.68■■□□□ 1.7
COPS7A-218ENST00000543939 CRYBG1Q9Y4K1 1723 aa25.68■■□□□ 1.7
COPS7A-218ENST00000543939 RGPD2P0DJD1 1756 aa25.68■■□□□ 1.7
COPS7A-218ENST00000543939 ZNF853P0CG23 659 aa25.68■■□□□ 1.7
COPS7A-218ENST00000543939 SPATA31A3Q5VYP0 1347 aa25.68■■□□□ 1.7
COPS7A-218ENST00000543939 FAM83GA6ND36 823 aa25.67■■□□□ 1.7
COPS7A-218ENST00000543939 GNAI1P63096 354 aa25.67■■□□□ 1.7
COPS7A-218ENST00000543939 ZBTB7CA1YPR0 619 aa25.66■■□□□ 1.7
COPS7A-218ENST00000543939 PLEKHG5O94827 1062 aa25.66■■□□□ 1.7
COPS7A-218ENST00000543939 MTHFSDQ2M296 383 aaKnown RBP25.66■■□□□ 1.7
COPS7A-218ENST00000543939 RGPD5Q99666 1765 aa25.65■■□□□ 1.7
COPS7A-218ENST00000543939 CCDC136Q96JN2 1154 aa25.65■■□□□ 1.7
COPS7A-218ENST00000543939 DCTN1Q14203 1278 aa25.64■■□□□ 1.7
COPS7A-218ENST00000543939 GAS2L2Q8NHY3 880 aa25.63■■□□□ 1.69
COPS7A-218ENST00000543939 CFAP44Q96MT7 982 aa25.63■■□□□ 1.69
COPS7A-218ENST00000543939 LAS1LQ9Y4W2 734 aaKnown RBP25.63■■□□□ 1.69
COPS7A-218ENST00000543939 NBPF6Q5VWK0 638 aa25.63■■□□□ 1.69
COPS7A-218ENST00000543939 NBPF4Q96M43 638 aa25.63■■□□□ 1.69
COPS7A-218ENST00000543939 SOS2Q07890 1332 aaPredicted RBP25.62■■□□□ 1.69
COPS7A-218ENST00000543939 CAMTA1Q9Y6Y1 1673 aa25.62■■□□□ 1.69
COPS7A-218ENST00000543939 COL18A1P39060 1754 aa25.61■■□□□ 1.69
COPS7A-218ENST00000543939 NCAPD2Q15021 1401 aa25.61■■□□□ 1.69
COPS7A-218ENST00000543939 PDE3AQ14432 1141 aa25.6■■□□□ 1.69
COPS7A-218ENST00000543939 MBIPQ9NS73 344 aa25.6■■□□□ 1.69
COPS7A-218ENST00000543939 NHSL1Q5SYE7 1610 aa25.6■■□□□ 1.69
COPS7A-218ENST00000543939 USHBP1Q8N6Y0 703 aa25.6■■□□□ 1.69
COPS7A-218ENST00000543939 ZC3H6P61129 1189 aaKnown RBP25.59■■□□□ 1.69
COPS7A-218ENST00000543939 MCM10Q7L590 875 aa25.59■■□□□ 1.69
COPS7A-218ENST00000543939 AXIN2Q9Y2T1 843 aa25.59■■□□□ 1.69
COPS7A-218ENST00000543939 ANKRD24Q8TF21 1146 aa25.58■■□□□ 1.69
COPS7A-218ENST00000543939 BCL2L13Q9BXK5 485 aa25.58■■□□□ 1.69
COPS7A-218ENST00000543939 CRB1P82279 1406 aa25.57■■□□□ 1.68
COPS7A-218ENST00000543939 ABCC6O95255 1503 aa25.57■■□□□ 1.68
COPS7A-218ENST00000543939 HTATSF1O43719 755 aaKnown RBP25.57■■□□□ 1.68
COPS7A-218ENST00000543939 CABLES1Q8TDN4 633 aa25.57■■□□□ 1.68
COPS7A-218ENST00000543939 LRRC59Q96AG4 307 aaKnown RBP25.57■■□□□ 1.68
COPS7A-218ENST00000543939 CANXP27824 592 aaKnown RBP25.56■■□□□ 1.68
COPS7A-218ENST00000543939 ZNF428Q96B54 188 aa25.56■■□□□ 1.68
COPS7A-218ENST00000543939 LRRC37A3O60309 1634 aa25.56■■□□□ 1.68
COPS7A-218ENST00000543939 SSH1Q8WYL5 1049 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms