RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 ESF1Q9H501 851 aaKnown RBP17.04■□□□□ 0.32
PPME1-208ENST00000543525 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
PPME1-208ENST00000543525 MAP2P11137 1827 aaKnown RBP17.04■□□□□ 0.32
PPME1-208ENST00000543525 C3P01024 1663 aa17.04■□□□□ 0.32
PPME1-208ENST00000543525 UBAP1LF5GYI3 381 aa17.04■□□□□ 0.32
PPME1-208ENST00000543525 FRAT2O75474 233 aaPredicted RBP17.04■□□□□ 0.32
PPME1-208ENST00000543525 IL13P35225 146 aa17.04■□□□□ 0.32
PPME1-208ENST00000543525 GNAI1P63096 354 aa17.04■□□□□ 0.32
PPME1-208ENST00000543525 HMOX1P09601 288 aa17.03■□□□□ 0.32
PPME1-208ENST00000543525 FBLN1P23142 703 aa17.03■□□□□ 0.32
PPME1-208ENST00000543525 LMOD3Q0VAK6 560 aa17.03■□□□□ 0.32
PPME1-208ENST00000543525 NUDT16Q96DE0 195 aaKnown RBP17.03■□□□□ 0.32
PPME1-208ENST00000543525 IFT57Q9NWB7 429 aa17.03■□□□□ 0.32
PPME1-208ENST00000543525 NME9Q86XW9 330 aa17.02■□□□□ 0.32
PPME1-208ENST00000543525 ARHGAP45Q92619 1136 aa17.02■□□□□ 0.32
PPME1-208ENST00000543525 COG3Q96JB2 828 aa17.02■□□□□ 0.32
PPME1-208ENST00000543525 PHACTR3Q96KR7 559 aa17.02■□□□□ 0.32
PPME1-208ENST00000543525 EMILIN1Q9Y6C2 1016 aa17.02■□□□□ 0.32
PPME1-208ENST00000543525 KNDC1Q76NI1 1749 aa17.02■□□□□ 0.32
PPME1-208ENST00000543525 METP08581 1390 aa17.02■□□□□ 0.31
PPME1-208ENST00000543525 TXNDC2Q86VQ3 553 aa17.01■□□□□ 0.31
PPME1-208ENST00000543525 CCDC61Q9Y6R9 512 aa17.01■□□□□ 0.31
PPME1-208ENST00000543525 TECPR2O15040 1411 aa17.01■□□□□ 0.31
PPME1-208ENST00000543525 VAMP4O75379 141 aa17■□□□□ 0.31
PPME1-208ENST00000543525 MRPL50Q8N5N7 158 aaKnown RBP17■□□□□ 0.31
PPME1-208ENST00000543525 ZNF692Q9BU19 519 aaPredicted RBP17■□□□□ 0.31
PPME1-208ENST00000543525 MON2Q7Z3U7 1717 aa16.99■□□□□ 0.31
PPME1-208ENST00000543525 NUCB1Q02818 461 aa16.99■□□□□ 0.31
PPME1-208ENST00000543525 CPS1P31327 1500 aa16.98■□□□□ 0.31
PPME1-208ENST00000543525 ZNF853P0CG23 659 aa16.98■□□□□ 0.31
PPME1-208ENST00000543525 TBC1D2Q9BYX2 928 aa16.98■□□□□ 0.31
PPME1-208ENST00000543525 C22orf23Q9BZE7 217 aa16.98■□□□□ 0.31
PPME1-208ENST00000543525 PIK3R4Q99570 1358 aa16.98■□□□□ 0.31
PPME1-208ENST00000543525 ZNF335Q9H4Z2 1342 aaPredicted RBP16.98■□□□□ 0.31
PPME1-208ENST00000543525 PTCH1Q13635 1447 aa16.98■□□□□ 0.31
PPME1-208ENST00000543525 ZRANB1Q9UGI0 708 aa16.97■□□□□ 0.31
PPME1-208ENST00000543525 MFAP1P55081 439 aaKnown RBP16.96■□□□□ 0.31
PPME1-208ENST00000543525 THUMPD2Q9BTF0 503 aaKnown RBP16.96■□□□□ 0.31
PPME1-208ENST00000543525 SLKQ9H2G2 1235 aaPredicted RBP16.96■□□□□ 0.31
PPME1-208ENST00000543525 MBIPQ9NS73 344 aa16.96■□□□□ 0.31
PPME1-208ENST00000543525 AKAP12Q02952 1782 aa16.96■□□□□ 0.31
PPME1-208ENST00000543525 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.31
PPME1-208ENST00000543525 ITSN1Q15811 1721 aa16.96■□□□□ 0.31
PPME1-208ENST00000543525 TNRQ92752 1358 aa16.96■□□□□ 0.31
PPME1-208ENST00000543525 CHD1LQ86WJ1 897 aa16.96■□□□□ 0.3
PPME1-208ENST00000543525 CFAP44Q96MT7 982 aa16.96■□□□□ 0.3
PPME1-208ENST00000543525 ANTXR1Q9H6X2 564 aa16.96■□□□□ 0.3
PPME1-208ENST00000543525 ZBTB7BO15156 539 aaPredicted RBP16.95■□□□□ 0.3
PPME1-208ENST00000543525 GCC1Q96CN9 775 aa16.95■□□□□ 0.3
PPME1-208ENST00000543525 TWISTNBQ3B726 338 aaPredicted RBP16.94■□□□□ 0.3
PPME1-208ENST00000543525 RRS1Q15050 365 aaKnown RBP16.94■□□□□ 0.3
PPME1-208ENST00000543525 TSPYL6Q8N831 410 aa16.94■□□□□ 0.3
PPME1-208ENST00000543525 API5Q9BZZ5 524 aaKnown RBP16.94■□□□□ 0.3
PPME1-208ENST00000543525 ABCC4O15439 1325 aa16.93■□□□□ 0.3
PPME1-208ENST00000543525 LNPKQ9C0E8 428 aa16.92■□□□□ 0.3
PPME1-208ENST00000543525 TMEM2Q9UHN6 1383 aa16.92■□□□□ 0.3
PPME1-208ENST00000543525 MED1Q15648 1581 aaPredicted RBP16.92■□□□□ 0.3
PPME1-208ENST00000543525 NRKQ7Z2Y5 1582 aa16.91■□□□□ 0.3
PPME1-208ENST00000543525 PRR36Q9H6K5 1346 aa16.91■□□□□ 0.3
PPME1-208ENST00000543525 KIF24Q5T7B8 1368 aa16.91■□□□□ 0.3
PPME1-208ENST00000543525 HAP1P54257 671 aaPredicted RBP16.9■□□□□ 0.3
PPME1-208ENST00000543525 DLG5Q8TDM6 1919 aa16.9■□□□□ 0.3
PPME1-208ENST00000543525 ELL2O00472 640 aaPredicted RBP16.9■□□□□ 0.3
PPME1-208ENST00000543525 HSPA1LP34931 641 aa16.9■□□□□ 0.3
PPME1-208ENST00000543525 BMP2KLQ5H9B9 411 aa16.9■□□□□ 0.3
PPME1-208ENST00000543525 ANKRD45Q5TZF3 282 aa16.9■□□□□ 0.3
PPME1-208ENST00000543525 C8orf58Q8NAV2 365 aa16.9■□□□□ 0.3
PPME1-208ENST00000543525 TTC21BQ7Z4L5 1316 aa16.89■□□□□ 0.29
PPME1-208ENST00000543525 HSCBQ8IWL3 235 aa16.89■□□□□ 0.29
PPME1-208ENST00000543525 UBR1Q8IWV7 1749 aa16.88■□□□□ 0.29
PPME1-208ENST00000543525 ROBO2Q9HCK4 1378 aa16.88■□□□□ 0.29
PPME1-208ENST00000543525 RBM25P49756 843 aaKnown RBP16.88■□□□□ 0.29
PPME1-208ENST00000543525 IL27Q8NEV9 243 aa16.88■□□□□ 0.29
PPME1-208ENST00000543525 PLEKHG3A1L390 1219 aa16.87■□□□□ 0.29
PPME1-208ENST00000543525 EIF4A2Q14240 407 aaKnown RBP16.87■□□□□ 0.29
PPME1-208ENST00000543525 C1orf115Q9H7X2 142 aa16.87■□□□□ 0.29
PPME1-208ENST00000543525 CHMP5Q9NZZ3 219 aa16.87■□□□□ 0.29
PPME1-208ENST00000543525 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
PPME1-208ENST00000543525 FAM83GA6ND36 823 aa16.86■□□□□ 0.29
PPME1-208ENST00000543525 PLEKHG1Q9ULL1 1385 aa16.86■□□□□ 0.29
PPME1-208ENST00000543525 SULT6B1Q6IMI4 303 aa16.86■□□□□ 0.29
PPME1-208ENST00000543525 TOPAZ1Q8N9V7 1692 aa16.85■□□□□ 0.29
PPME1-208ENST00000543525 ACEP12821 1306 aa16.85■□□□□ 0.29
PPME1-208ENST00000543525 OVOS2A0A0J9YW53 1432 aa16.85■□□□□ 0.29
PPME1-208ENST00000543525 OVOS2Q6IE36 1432 aa16.85■□□□□ 0.29
PPME1-208ENST00000543525 EIF5BO60841 1220 aaKnown RBP16.84■□□□□ 0.29
PPME1-208ENST00000543525 DCTN1Q14203 1278 aa16.84■□□□□ 0.29
PPME1-208ENST00000543525 SNX21Q969T3 373 aa16.84■□□□□ 0.29
PPME1-208ENST00000543525 SIRT2Q8IXJ6 389 aa16.84■□□□□ 0.29
PPME1-208ENST00000543525 SPRYD3Q8NCJ5 442 aa16.84■□□□□ 0.29
PPME1-208ENST00000543525 BRPF3Q9ULD4 1205 aa16.84■□□□□ 0.29
PPME1-208ENST00000543525 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.84■□□□□ 0.29
PPME1-208ENST00000543525 USP6P35125 1406 aa16.83■□□□□ 0.28
PPME1-208ENST00000543525 AEBP1Q8IUX7 1158 aa16.83■□□□□ 0.28
PPME1-208ENST00000543525 CHL1O00533 1208 aa16.82■□□□□ 0.28
PPME1-208ENST00000543525 TOM1O60784 492 aa16.82■□□□□ 0.28
PPME1-208ENST00000543525 INTS3Q68E01 1043 aaKnown RBP16.82■□□□□ 0.28
PPME1-208ENST00000543525 KIAA0232Q92628 1395 aa16.82■□□□□ 0.28
PPME1-208ENST00000543525 ZNF142P52746 1687 aaPredicted RBP16.82■□□□□ 0.28
PPME1-208ENST00000543525 PIP4K2BP78356 416 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms