RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 GLI2P10070 1586 aa15.46■□□□□ 0.07
SMCR5-201ENST00000543475 ARHGAP45Q92619 1136 aa15.46■□□□□ 0.07
SMCR5-201ENST00000543475 CFAP44Q96MT7 982 aa15.46■□□□□ 0.07
SMCR5-201ENST00000543475 ZNF500O60304 480 aaPredicted RBP15.45■□□□□ 0.06
SMCR5-201ENST00000543475 PRIM1P49642 420 aaKnown RBP15.45■□□□□ 0.06
SMCR5-201ENST00000543475 SRPK2P78362 688 aaKnown RBP15.45■□□□□ 0.06
SMCR5-201ENST00000543475 MAP7D2Q96T17 732 aa15.45■□□□□ 0.06
SMCR5-201ENST00000543475 GSPT1P15170 499 aaKnown RBP15.45■□□□□ 0.06
SMCR5-201ENST00000543475 XPCQ01831 940 aaPredicted RBP15.45■□□□□ 0.06
SMCR5-201ENST00000543475 MRPL50Q8N5N7 158 aaKnown RBP15.45■□□□□ 0.06
SMCR5-201ENST00000543475 ARHGEF28Q8N1W1 1705 aaKnown RBP15.45■□□□□ 0.06
SMCR5-201ENST00000543475 RPGRIP1LQ68CZ1 1315 aa15.45■□□□□ 0.06
SMCR5-201ENST00000543475 REREQ9P2R6 1566 aa15.45■□□□□ 0.06
SMCR5-201ENST00000543475 CYP2E1P05181 493 aaPredicted RBP15.44■□□□□ 0.06
SMCR5-201ENST00000543475 PKP1Q13835 747 aa15.44■□□□□ 0.06
SMCR5-201ENST00000543475 NUTM2DQ5VT03 806 aaPredicted RBP15.44■□□□□ 0.06
SMCR5-201ENST00000543475 PDLIM2Q96JY6 352 aa15.44■□□□□ 0.06
SMCR5-201ENST00000543475 UHRF1BP1LA0JNW5 1464 aa15.44■□□□□ 0.06
SMCR5-201ENST00000543475 PRPF40AO75400 957 aaKnown RBP15.44■□□□□ 0.06
SMCR5-201ENST00000543475 FYB1O15117 783 aa15.44■□□□□ 0.06
SMCR5-201ENST00000543475 VAMP4O75379 141 aa15.44■□□□□ 0.06
SMCR5-201ENST00000543475 CWC22Q9HCG8 908 aaKnown RBP15.44■□□□□ 0.06
SMCR5-201ENST00000543475 FCHSD2O94868 740 aa15.43■□□□□ 0.06
SMCR5-201ENST00000543475 PLEKHM2Q8IWE5 1019 aa15.43■□□□□ 0.06
SMCR5-201ENST00000543475 PIK3R4Q99570 1358 aa15.43■□□□□ 0.06
SMCR5-201ENST00000543475 PTCH1Q13635 1447 aa15.43■□□□□ 0.06
SMCR5-201ENST00000543475 UQCRHLA0A096LP55 91 aa15.43■□□□□ 0.06
SMCR5-201ENST00000543475 UQCRHP07919 91 aa15.43■□□□□ 0.06
SMCR5-201ENST00000543475 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.43■□□□□ 0.06
SMCR5-201ENST00000543475 LMTK2Q8IWU2 1503 aa15.43■□□□□ 0.06
SMCR5-201ENST00000543475 ELL2O00472 640 aaPredicted RBP15.42■□□□□ 0.06
SMCR5-201ENST00000543475 USP26Q9BXU7 913 aa15.42■□□□□ 0.06
SMCR5-201ENST00000543475 RBM27Q9P2N5 1060 aaKnown RBP15.42■□□□□ 0.06
SMCR5-201ENST00000543475 ZKSCAN5Q9Y2L8 839 aa15.42■□□□□ 0.06
SMCR5-201ENST00000543475 ABCA9Q8IUA7 1624 aa15.42■□□□□ 0.06
SMCR5-201ENST00000543475 PRKAR2BP31323 418 aa15.42■□□□□ 0.06
SMCR5-201ENST00000543475 TERF2IPQ9NYB0 399 aa15.42■□□□□ 0.06
SMCR5-201ENST00000543475 ST18O60284 1047 aa15.41■□□□□ 0.06
SMCR5-201ENST00000543475 CSPP1Q1MSJ5 1256 aa15.41■□□□□ 0.06
SMCR5-201ENST00000543475 TSPYL6Q8N831 410 aa15.41■□□□□ 0.06
SMCR5-201ENST00000543475 ABCC4O15439 1325 aa15.41■□□□□ 0.06
SMCR5-201ENST00000543475 INTS3Q68E01 1043 aaKnown RBP15.41■□□□□ 0.06
SMCR5-201ENST00000543475 GPT2Q8TD30 523 aa15.41■□□□□ 0.06
SMCR5-201ENST00000543475 NPATQ14207 1427 aa15.41■□□□□ 0.06
SMCR5-201ENST00000543475 ANKRD26Q9UPS8 1709 aa15.41■□□□□ 0.06
SMCR5-201ENST00000543475 TTC22Q5TAA0 569 aa15.4■□□□□ 0.06
SMCR5-201ENST00000543475 THUMPD2Q9BTF0 503 aaKnown RBP15.4■□□□□ 0.06
SMCR5-201ENST00000543475 ZGPATQ8N5A5 531 aaKnown RBP15.4■□□□□ 0.06
SMCR5-201ENST00000543475 LRRC7Q96NW7 1537 aa15.4■□□□□ 0.06
SMCR5-201ENST00000543475 VGFO15240 615 aaPredicted RBP15.39■□□□□ 0.06
SMCR5-201ENST00000543475 MCM5P33992 734 aa15.39■□□□□ 0.06
SMCR5-201ENST00000543475 CASC1Q6TDU7 716 aa15.39■□□□□ 0.05
SMCR5-201ENST00000543475 LRSAM1Q6UWE0 723 aa15.39■□□□□ 0.05
SMCR5-201ENST00000543475 STK26Q9P289 416 aa15.39■□□□□ 0.05
SMCR5-201ENST00000543475 SYCE3A1L190 88 aa15.39■□□□□ 0.05
SMCR5-201ENST00000543475 GGT6Q6P531 493 aa15.39■□□□□ 0.05
SMCR5-201ENST00000543475 CCDC39Q9UFE4 941 aa15.39■□□□□ 0.05
SMCR5-201ENST00000543475 PNPLA6Q8IY17 1366 aa15.38■□□□□ 0.05
SMCR5-201ENST00000543475 CAMSAP1Q5T5Y3 1602 aa15.38■□□□□ 0.05
SMCR5-201ENST00000543475 GNAI1P63096 354 aa15.38■□□□□ 0.05
SMCR5-201ENST00000543475 C16orf71Q8IYS4 520 aaPredicted RBP15.38■□□□□ 0.05
SMCR5-201ENST00000543475 API5Q9BZZ5 524 aaKnown RBP15.38■□□□□ 0.05
SMCR5-201ENST00000543475 DCTPP1Q9H773 170 aa15.38■□□□□ 0.05
SMCR5-201ENST00000543475 KIDINS220Q9ULH0 1771 aa15.38■□□□□ 0.05
SMCR5-201ENST00000543475 NFE2L2Q16236 605 aa15.37■□□□□ 0.05
SMCR5-201ENST00000543475 TWISTNBQ3B726 338 aaPredicted RBP15.37■□□□□ 0.05
SMCR5-201ENST00000543475 TMEM63CQ9P1W3 806 aa15.37■□□□□ 0.05
SMCR5-201ENST00000543475 DYNC1I1O14576 645 aa15.37■□□□□ 0.05
SMCR5-201ENST00000543475 MTERF4Q7Z6M4 381 aaKnown RBP15.37■□□□□ 0.05
SMCR5-201ENST00000543475 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
SMCR5-201ENST00000543475 ZDHHC9Q9Y397 364 aa15.37■□□□□ 0.05
SMCR5-201ENST00000543475 FAM135BQ49AJ0 1406 aa15.37■□□□□ 0.05
SMCR5-201ENST00000543475 ATAD2Q6PL18 1390 aa15.36■□□□□ 0.05
SMCR5-201ENST00000543475 PHACTR3Q96KR7 559 aa15.36■□□□□ 0.05
SMCR5-201ENST00000543475 MBIPQ9NS73 344 aa15.36■□□□□ 0.05
SMCR5-201ENST00000543475 IFT57Q9NWB7 429 aa15.36■□□□□ 0.05
SMCR5-201ENST00000543475 HMOX1P09601 288 aa15.36■□□□□ 0.05
SMCR5-201ENST00000543475 HDGFL2Q7Z4V5 671 aaPredicted RBP15.35■□□□□ 0.05
SMCR5-201ENST00000543475 KLHL34Q8N239 644 aa15.35■□□□□ 0.05
SMCR5-201ENST00000543475 MINK1Q8N4C8 1332 aaPredicted RBP15.35■□□□□ 0.05
SMCR5-201ENST00000543475 SDSP20132 328 aa15.35■□□□□ 0.05
SMCR5-201ENST00000543475 FOXD4L5Q5VV16 416 aaPredicted RBP15.35■□□□□ 0.05
SMCR5-201ENST00000543475 SASS6Q6UVJ0 657 aa15.35■□□□□ 0.05
SMCR5-201ENST00000543475 FOXD4L4Q8WXT5 416 aaPredicted RBP15.35■□□□□ 0.05
SMCR5-201ENST00000543475 CHAMP1Q96JM3 812 aa15.35■□□□□ 0.05
SMCR5-201ENST00000543475 ZFYVE9O95405 1425 aa15.35■□□□□ 0.05
SMCR5-201ENST00000543475 REC8O95072 547 aa15.35■□□□□ 0.05
SMCR5-201ENST00000543475 RNF214Q8ND24 703 aa15.35■□□□□ 0.05
SMCR5-201ENST00000543475 ARID3AQ99856 593 aa15.35■□□□□ 0.05
SMCR5-201ENST00000543475 OTUD7AQ8TE49 926 aaPredicted RBP15.34■□□□□ 0.05
SMCR5-201ENST00000543475 NSFL1CQ9UNZ2 370 aaKnown RBP15.34■□□□□ 0.05
SMCR5-201ENST00000543475 MBD3O95983 291 aa15.34■□□□□ 0.05
SMCR5-201ENST00000543475 PTMAP06454 111 aaKnown RBP15.34■□□□□ 0.05
SMCR5-201ENST00000543475 KNDC1Q76NI1 1749 aa15.34■□□□□ 0.05
SMCR5-201ENST00000543475 APBB1O00213 710 aa15.33■□□□□ 0.04
SMCR5-201ENST00000543475 CDC42BPGQ6DT37 1551 aa15.33■□□□□ 0.04
SMCR5-201ENST00000543475 PDE4CQ08493 712 aa15.33■□□□□ 0.04
SMCR5-201ENST00000543475 C8orf58Q8NAV2 365 aa15.33■□□□□ 0.04
SMCR5-201ENST00000543475 CD163L1Q9NR16 1453 aa15.32■□□□□ 0.04
SMCR5-201ENST00000543475 FBLN1P23142 703 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms