RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 RTL1A6NKG5 1358 aa12.25□□□□□ -0.45
GNE-206ENST00000543356 MAP3K19Q56UN5 1328 aa12.25□□□□□ -0.45
GNE-206ENST00000543356 E9PSI1 815 aa12.25□□□□□ -0.45
GNE-206ENST00000543356 PAK3O75914 559 aaPredicted RBP12.24□□□□□ -0.45
GNE-206ENST00000543356 WDR63Q8IWG1 891 aa12.24□□□□□ -0.45
GNE-206ENST00000543356 RCAN3Q9UKA8 241 aa12.24□□□□□ -0.45
GNE-206ENST00000543356 EIF4A2Q14240 407 aaKnown RBP12.23□□□□□ -0.45
GNE-206ENST00000543356 RRP7AQ9Y3A4 280 aaKnown RBP12.23□□□□□ -0.45
GNE-206ENST00000543356 DMRT2Q9Y5R5 561 aa12.23□□□□□ -0.45
GNE-206ENST00000543356 ARHGEF10O15013 1369 aa12.22□□□□□ -0.45
GNE-206ENST00000543356 ZNF335Q9H4Z2 1342 aaPredicted RBP12.22□□□□□ -0.45
GNE-206ENST00000543356 TMPOP42166 694 aaKnown RBP12.22□□□□□ -0.45
GNE-206ENST00000543356 PRKAR2BP31323 418 aa12.22□□□□□ -0.45
GNE-206ENST00000543356 FOXO3O43524 673 aa12.21□□□□□ -0.45
GNE-206ENST00000543356 USP19O94966 1318 aa12.21□□□□□ -0.46
GNE-206ENST00000543356 NEFMP07197 916 aa12.21□□□□□ -0.46
GNE-206ENST00000543356 KRT28Q7Z3Y7 464 aa12.21□□□□□ -0.46
GNE-206ENST00000543356 KCNH5Q8NCM2 988 aa12.21□□□□□ -0.46
GNE-206ENST00000543356 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.46
GNE-206ENST00000543356 NEUROD2Q15784 382 aa12.2□□□□□ -0.46
GNE-206ENST00000543356 HSP90AB2PQ58FF8 381 aa12.2□□□□□ -0.46
GNE-206ENST00000543356 NUTM2GQ5VZR2 741 aa12.2□□□□□ -0.46
GNE-206ENST00000543356 PXDNQ92626 1479 aa12.2□□□□□ -0.46
GNE-206ENST00000543356 SOX12O15370 315 aa12.2□□□□□ -0.46
GNE-206ENST00000543356 HMOX1P09601 288 aa12.2□□□□□ -0.46
GNE-206ENST00000543356 RRP1P56182 461 aaKnown RBP12.2□□□□□ -0.46
GNE-206ENST00000543356 AMPHP49418 695 aa12.19□□□□□ -0.46
GNE-206ENST00000543356 TRIM35Q9UPQ4 493 aa12.19□□□□□ -0.46
GNE-206ENST00000543356 IL16Q14005 1332 aa12.19□□□□□ -0.46
GNE-206ENST00000543356 CRYBG1Q9Y4K1 1723 aa12.19□□□□□ -0.46
GNE-206ENST00000543356 HOXC9P31274 260 aa12.19□□□□□ -0.46
GNE-206ENST00000543356 MED1Q15648 1581 aaPredicted RBP12.19□□□□□ -0.46
GNE-206ENST00000543356 DLG5Q8TDM6 1919 aa12.18□□□□□ -0.46
GNE-206ENST00000543356 NPHP3Q7Z494 1330 aa12.18□□□□□ -0.46
GNE-206ENST00000543356 KDRP35968 1356 aa12.18□□□□□ -0.46
GNE-206ENST00000543356 NFE2L2Q16236 605 aa12.18□□□□□ -0.46
GNE-206ENST00000543356 IRX6P78412 446 aaPredicted RBP12.18□□□□□ -0.46
GNE-206ENST00000543356 TNS3Q68CZ2 1445 aa12.17□□□□□ -0.46
GNE-206ENST00000543356 IGSF1Q8N6C5 1336 aa12.17□□□□□ -0.46
GNE-206ENST00000543356 RIPK4P57078 832 aa12.17□□□□□ -0.46
GNE-206ENST00000543356 XPCQ01831 940 aaPredicted RBP12.17□□□□□ -0.46
GNE-206ENST00000543356 PHACTR3Q96KR7 559 aa12.17□□□□□ -0.46
GNE-206ENST00000543356 MYH16Q9H6N6 1097 aa12.17□□□□□ -0.46
GNE-206ENST00000543356 SULT6B1Q6IMI4 303 aa12.16□□□□□ -0.46
GNE-206ENST00000543356 NHSL1Q5SYE7 1610 aa12.16□□□□□ -0.46
GNE-206ENST00000543356 IP6K1Q92551 441 aa12.16□□□□□ -0.46
GNE-206ENST00000543356 ABCC6O95255 1503 aa12.15□□□□□ -0.46
GNE-206ENST00000543356 CAMTA1Q9Y6Y1 1673 aa12.15□□□□□ -0.46
GNE-206ENST00000543356 LMOD3Q0VAK6 560 aa12.15□□□□□ -0.47
GNE-206ENST00000543356 BRINP3Q76B58 766 aa12.15□□□□□ -0.47
GNE-206ENST00000543356 AEBP1Q8IUX7 1158 aa12.15□□□□□ -0.47
GNE-206ENST00000543356 GCP02774 474 aa12.14□□□□□ -0.47
GNE-206ENST00000543356 CALD1Q05682 793 aaKnown RBP12.14□□□□□ -0.47
GNE-206ENST00000543356 ARHGEF25Q86VW2 580 aa12.13□□□□□ -0.47
GNE-206ENST00000543356 EYA1Q99502 592 aa12.13□□□□□ -0.47
GNE-206ENST00000543356 PPP4R2Q9NY27 417 aa12.13□□□□□ -0.47
GNE-206ENST00000543356 SLAIN2Q9P270 581 aa12.13□□□□□ -0.47
GNE-206ENST00000543356 SPATA31A3Q5VYP0 1347 aa12.13□□□□□ -0.47
GNE-206ENST00000543356 FANCIQ9NVI1 1328 aa12.13□□□□□ -0.47
GNE-206ENST00000543356 LTBP4Q8N2S1 1624 aa12.13□□□□□ -0.47
GNE-206ENST00000543356 NCAPD2Q15021 1401 aa12.12□□□□□ -0.47
GNE-206ENST00000543356 CT47B1P0C2W7 299 aaPredicted RBP12.12□□□□□ -0.47
GNE-206ENST00000543356 LMOD2Q6P5Q4 547 aa12.12□□□□□ -0.47
GNE-206ENST00000543356 DDX17Q92841 729 aaKnown RBP12.11□□□□□ -0.47
GNE-206ENST00000543356 COL18A1P39060 1754 aa12.11□□□□□ -0.47
GNE-206ENST00000543356 ABCA3Q99758 1704 aa12.11□□□□□ -0.47
GNE-206ENST00000543356 LMO7Q8WWI1 1683 aa12.11□□□□□ -0.47
GNE-206ENST00000543356 SOS2Q07890 1332 aaPredicted RBP12.11□□□□□ -0.47
GNE-206ENST00000543356 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.11□□□□□ -0.47
GNE-206ENST00000543356 FAM208AQ9UK61 1670 aaKnown RBP12.11□□□□□ -0.47
GNE-206ENST00000543356 LRRC37A3O60309 1634 aa12.11□□□□□ -0.47
GNE-206ENST00000543356 RGPD2P0DJD1 1756 aa12.1□□□□□ -0.47
GNE-206ENST00000543356 RTN4Q9NQC3 1192 aaKnown RBP12.1□□□□□ -0.47
GNE-206ENST00000543356 RGPD5Q99666 1765 aa12.09□□□□□ -0.47
GNE-206ENST00000543356 IFT57Q9NWB7 429 aa12.09□□□□□ -0.47
GNE-206ENST00000543356 TSR2Q969E8 191 aaKnown RBP12.08□□□□□ -0.48
GNE-206ENST00000543356 CPDO75976 1380 aa12.08□□□□□ -0.48
GNE-206ENST00000543356 ZNF853P0CG23 659 aa12.08□□□□□ -0.48
GNE-206ENST00000543356 GNAI1P63096 354 aa12.08□□□□□ -0.48
GNE-206ENST00000543356 GAS2L2Q8NHY3 880 aa12.08□□□□□ -0.48
GNE-206ENST00000543356 RARSP54136 660 aaKnown RBP12.07□□□□□ -0.48
GNE-206ENST00000543356 LTV1Q96GA3 475 aaPredicted RBP12.07□□□□□ -0.48
GNE-206ENST00000543356 AHDC1Q5TGY3 1603 aaPredicted RBP12.07□□□□□ -0.48
GNE-206ENST00000543356 PLIN1O60240 522 aa12.07□□□□□ -0.48
GNE-206ENST00000543356 ROBO1Q9Y6N7 1651 aa12.06□□□□□ -0.48
GNE-206ENST00000543356 ZBTB7CA1YPR0 619 aa12.06□□□□□ -0.48
GNE-206ENST00000543356 EXOSC9Q06265 439 aaKnown RBP12.06□□□□□ -0.48
GNE-206ENST00000543356 MTHFSDQ2M296 383 aaKnown RBP12.06□□□□□ -0.48
GNE-206ENST00000543356 HTATSF1O43719 755 aaKnown RBP12.06□□□□□ -0.48
GNE-206ENST00000543356 BCAR3O75815 825 aa12.06□□□□□ -0.48
GNE-206ENST00000543356 NBPF6Q5VWK0 638 aa12.06□□□□□ -0.48
GNE-206ENST00000543356 ANKRD24Q8TF21 1146 aa12.06□□□□□ -0.48
GNE-206ENST00000543356 NBPF4Q96M43 638 aa12.06□□□□□ -0.48
GNE-206ENST00000543356 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
GNE-206ENST00000543356 THUMPD2Q9BTF0 503 aaKnown RBP12.06□□□□□ -0.48
GNE-206ENST00000543356 UBE2Q2Q8WVN8 375 aa12.05□□□□□ -0.48
GNE-206ENST00000543356 CRB1P82279 1406 aa12.05□□□□□ -0.48
GNE-206ENST00000543356 FAM83GA6ND36 823 aa12.05□□□□□ -0.48
GNE-206ENST00000543356 EXOC6Q8TAG9 804 aa12.05□□□□□ -0.48
GNE-206ENST00000543356 ERBB3P21860 1342 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms