RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 STRCQ7RTU9 1775 aa17.88■□□□□ 0.45
PRAME-214ENST00000543184 TMEM94Q12767 1356 aa17.87■□□□□ 0.45
PRAME-214ENST00000543184 PRR36Q9H6K5 1346 aa17.87■□□□□ 0.45
PRAME-214ENST00000543184 HSCBQ8IWL3 235 aa17.87■□□□□ 0.45
PRAME-214ENST00000543184 QRICH2Q9H0J4 1663 aa17.86■□□□□ 0.45
PRAME-214ENST00000543184 DDX17Q92841 729 aaKnown RBP17.86■□□□□ 0.45
PRAME-214ENST00000543184 RBM42Q9BTD8 480 aaKnown RBP17.86■□□□□ 0.45
PRAME-214ENST00000543184 CD2BP2O95400 341 aaKnown RBP17.86■□□□□ 0.45
PRAME-214ENST00000543184 TULP4Q9NRJ4 1543 aa17.86■□□□□ 0.45
PRAME-214ENST00000543184 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.85■□□□□ 0.45
PRAME-214ENST00000543184 NUDT16Q96DE0 195 aaKnown RBP17.85■□□□□ 0.45
PRAME-214ENST00000543184 TRIM35Q9UPQ4 493 aa17.85■□□□□ 0.45
PRAME-214ENST00000543184 GAS2L3Q86XJ1 694 aa17.85■□□□□ 0.45
PRAME-214ENST00000543184 ZNF692Q9BU19 519 aaPredicted RBP17.85■□□□□ 0.45
PRAME-214ENST00000543184 PNNQ9H307 717 aaKnown RBP17.85■□□□□ 0.45
PRAME-214ENST00000543184 ERBB4Q15303 1308 aa17.84■□□□□ 0.45
PRAME-214ENST00000543184 ELL2O00472 640 aaPredicted RBP17.84■□□□□ 0.45
PRAME-214ENST00000543184 TMPOP42166 694 aaKnown RBP17.84■□□□□ 0.45
PRAME-214ENST00000543184 ATF7IPQ6VMQ6 1270 aa17.84■□□□□ 0.45
PRAME-214ENST00000543184 ORAI2Q96SN7 254 aa17.84■□□□□ 0.45
PRAME-214ENST00000543184 SOX12O15370 315 aa17.83■□□□□ 0.44
PRAME-214ENST00000543184 TNPO1Q92973 898 aaKnown RBP17.83■□□□□ 0.44
PRAME-214ENST00000543184 RIPK4P57078 832 aa17.82■□□□□ 0.44
PRAME-214ENST00000543184 ESCO1Q5FWF5 840 aa17.82■□□□□ 0.44
PRAME-214ENST00000543184 THUMPD2Q9BTF0 503 aaKnown RBP17.82■□□□□ 0.44
PRAME-214ENST00000543184 GRPEL1Q9HAV7 217 aa17.82■□□□□ 0.44
PRAME-214ENST00000543184 HSP90AB1P08238 724 aaKnown RBP17.81■□□□□ 0.44
PRAME-214ENST00000543184 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
PRAME-214ENST00000543184 NUTM2GQ5VZR2 741 aa17.81■□□□□ 0.44
PRAME-214ENST00000543184 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.81■□□□□ 0.44
PRAME-214ENST00000543184 TECPR2O15040 1411 aa17.8■□□□□ 0.44
PRAME-214ENST00000543184 DDX19BQ9UMR2 479 aa17.8■□□□□ 0.44
PRAME-214ENST00000543184 ANKRD45Q5TZF3 282 aa17.8■□□□□ 0.44
PRAME-214ENST00000543184 FOXO3O43524 673 aa17.79■□□□□ 0.44
PRAME-214ENST00000543184 HSP90AA1P07900 732 aaKnown RBP17.79■□□□□ 0.44
PRAME-214ENST00000543184 HDAC1Q13547 482 aaPredicted RBP17.79■□□□□ 0.44
PRAME-214ENST00000543184 PLEKHF1Q96S99 279 aa17.79■□□□□ 0.44
PRAME-214ENST00000543184 ZBTB40Q9NUA8 1239 aa17.79■□□□□ 0.44
PRAME-214ENST00000543184 SMC5Q8IY18 1101 aa17.79■□□□□ 0.44
PRAME-214ENST00000543184 ZRANB1Q9UGI0 708 aa17.79■□□□□ 0.44
PRAME-214ENST00000543184 FAM135BQ49AJ0 1406 aa17.78■□□□□ 0.44
PRAME-214ENST00000543184 SLC24A1O60721 1099 aa17.78■□□□□ 0.44
PRAME-214ENST00000543184 NGDNQ8NEJ9 315 aaKnown RBP17.78■□□□□ 0.44
PRAME-214ENST00000543184 CCDC61Q9Y6R9 512 aa17.78■□□□□ 0.44
PRAME-214ENST00000543184 STRCP1A6NGW2 1772 aa17.78■□□□□ 0.44
PRAME-214ENST00000543184 MRE11P49959 708 aa17.77■□□□□ 0.44
PRAME-214ENST00000543184 AAMPQ13685 434 aa17.77■□□□□ 0.44
PRAME-214ENST00000543184 LMOD2Q6P5Q4 547 aa17.77■□□□□ 0.44
PRAME-214ENST00000543184 PIK3R4Q99570 1358 aa17.77■□□□□ 0.44
PRAME-214ENST00000543184 ATF3P18847 181 aa17.77■□□□□ 0.43
PRAME-214ENST00000543184 CPS1P31327 1500 aa17.77■□□□□ 0.43
PRAME-214ENST00000543184 SBNO2Q9Y2G9 1366 aa17.77■□□□□ 0.43
PRAME-214ENST00000543184 PTCH1Q13635 1447 aa17.76■□□□□ 0.43
PRAME-214ENST00000543184 PPIP5K1Q6PFW1 1433 aa17.76■□□□□ 0.43
PRAME-214ENST00000543184 CLCN1P35523 988 aa17.76■□□□□ 0.43
PRAME-214ENST00000543184 CHD1LQ86WJ1 897 aa17.76■□□□□ 0.43
PRAME-214ENST00000543184 CHD2O14647 1828 aaKnown RBP17.75■□□□□ 0.43
PRAME-214ENST00000543184 A0A1W2PP64 1363 aa17.75■□□□□ 0.43
PRAME-214ENST00000543184 DIP2AQ14689 1571 aa17.75■□□□□ 0.43
PRAME-214ENST00000543184 NUCB1Q02818 461 aa17.75■□□□□ 0.43
PRAME-214ENST00000543184 KIF2CQ99661 725 aa17.75■□□□□ 0.43
PRAME-214ENST00000543184 C19orf44Q9H6X5 657 aa17.75■□□□□ 0.43
PRAME-214ENST00000543184 AK9Q5TCS8 1911 aa17.75■□□□□ 0.43
PRAME-214ENST00000543184 ACEP12821 1306 aa17.75■□□□□ 0.43
PRAME-214ENST00000543184 SSFA2P28290 1259 aa17.74■□□□□ 0.43
PRAME-214ENST00000543184 XRN1Q8IZH2 1706 aaKnown RBP17.74■□□□□ 0.43
PRAME-214ENST00000543184 DLC1Q96QB1 1528 aa17.74■□□□□ 0.43
PRAME-214ENST00000543184 HMOX1P09601 288 aa17.74■□□□□ 0.43
PRAME-214ENST00000543184 ATAD2Q6PL18 1390 aa17.74■□□□□ 0.43
PRAME-214ENST00000543184 TSPYL6Q8N831 410 aa17.74■□□□□ 0.43
PRAME-214ENST00000543184 SIRT1Q96EB6 747 aa17.74■□□□□ 0.43
PRAME-214ENST00000543184 ESPNB1AK53 854 aa17.73■□□□□ 0.43
PRAME-214ENST00000543184 PIP4K2BP78356 416 aa17.73■□□□□ 0.43
PRAME-214ENST00000543184 DDX11L8A8MPP1 907 aa17.73■□□□□ 0.43
PRAME-214ENST00000543184 DDIT3P35638 169 aa17.73■□□□□ 0.43
PRAME-214ENST00000543184 GAS2L2Q8NHY3 880 aa17.72■□□□□ 0.43
PRAME-214ENST00000543184 NME9Q86XW9 330 aa17.72■□□□□ 0.43
PRAME-214ENST00000543184 FYB1O15117 783 aa17.71■□□□□ 0.43
PRAME-214ENST00000543184 RBM25P49756 843 aaKnown RBP17.71■□□□□ 0.43
PRAME-214ENST00000543184 TBC1D9Q6ZT07 1266 aa17.71■□□□□ 0.43
PRAME-214ENST00000543184 TRIM44Q96DX7 344 aaPredicted RBP17.7■□□□□ 0.42
PRAME-214ENST00000543184 CHAMP1Q96JM3 812 aa17.7■□□□□ 0.42
PRAME-214ENST00000543184 ADGRL3Q9HAR2 1447 aa17.7■□□□□ 0.42
PRAME-214ENST00000543184 ATP7BP35670 1465 aa17.7■□□□□ 0.42
PRAME-214ENST00000543184 HDGFL2Q7Z4V5 671 aaPredicted RBP17.7■□□□□ 0.42
PRAME-214ENST00000543184 ANKRD36BQ8N2N9 1353 aa17.7■□□□□ 0.42
PRAME-214ENST00000543184 APBB1O00213 710 aa17.69■□□□□ 0.42
PRAME-214ENST00000543184 TERF2IPQ9NYB0 399 aa17.69■□□□□ 0.42
PRAME-214ENST00000543184 NALCNQ8IZF0 1738 aa17.69■□□□□ 0.42
PRAME-214ENST00000543184 LRRC7Q96NW7 1537 aa17.69■□□□□ 0.42
PRAME-214ENST00000543184 PRKAR2BP31323 418 aa17.69■□□□□ 0.42
PRAME-214ENST00000543184 PHACTR3Q96KR7 559 aa17.69■□□□□ 0.42
PRAME-214ENST00000543184 PHF8Q9UPP1 1060 aa17.69■□□□□ 0.42
PRAME-214ENST00000543184 MSH6P52701 1360 aa17.69■□□□□ 0.42
PRAME-214ENST00000543184 SIRT2Q8IXJ6 389 aa17.68■□□□□ 0.42
PRAME-214ENST00000543184 NCLP19338 710 aaKnown RBP17.68■□□□□ 0.42
PRAME-214ENST00000543184 RAB3GAP1Q15042 981 aa17.68■□□□□ 0.42
PRAME-214ENST00000543184 C16orf71Q8IYS4 520 aaPredicted RBP17.68■□□□□ 0.42
PRAME-214ENST00000543184 VSIG10Q8N0Z9 540 aa17.68■□□□□ 0.42
PRAME-214ENST00000543184 DIAPH1O60610 1272 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms