RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 LILRB3O75022 631 aa11.35□□□□□ -0.59
PAAF1-212ENST00000543079 SIAH2O43255 324 aa11.34□□□□□ -0.59
PAAF1-212ENST00000543079 QPCTQ16769 361 aa11.34□□□□□ -0.59
PAAF1-212ENST00000543079 EHBP1Q8NDI1 1231 aa11.34□□□□□ -0.59
PAAF1-212ENST00000543079 BAP1Q92560 729 aa11.34□□□□□ -0.59
PAAF1-212ENST00000543079 ABCC2Q92887 1545 aa11.34□□□□□ -0.59
PAAF1-212ENST00000543079 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
PAAF1-212ENST00000543079 NUTM2BA6NNL0 878 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-212ENST00000543079 NUTM2EB1AL46 878 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-212ENST00000543079 POTECB2RU33 542 aa11.33□□□□□ -0.6
PAAF1-212ENST00000543079 NUTM2DQ5VT03 806 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-212ENST00000543079 NUTM2AQ8IVF1 878 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-212ENST00000543079 TEX14Q8IWB6 1497 aa11.32□□□□□ -0.6
PAAF1-212ENST00000543079 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
PAAF1-212ENST00000543079 IGF1RP08069 1367 aa11.31□□□□□ -0.6
PAAF1-212ENST00000543079 EPRSP07814 1512 aaKnown RBP11.31□□□□□ -0.6
PAAF1-212ENST00000543079 F12P00748 615 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-212ENST00000543079 CTHP32929 405 aa11.31□□□□□ -0.6
PAAF1-212ENST00000543079 KDM4CQ9H3R0 1056 aa11.31□□□□□ -0.6
PAAF1-212ENST00000543079 DACH1Q9UI36 760 aa11.31□□□□□ -0.6
PAAF1-212ENST00000543079 HSPA2P54652 639 aa11.3□□□□□ -0.6
PAAF1-212ENST00000543079 LINC01559Q495D7 138 aa11.3□□□□□ -0.6
PAAF1-212ENST00000543079 ZNF511Q8NB15 262 aa11.3□□□□□ -0.6
PAAF1-212ENST00000543079 HPS1Q92902 700 aa11.3□□□□□ -0.6
PAAF1-212ENST00000543079 GPBP1L1Q9HC44 474 aaPredicted RBP11.3□□□□□ -0.6
PAAF1-212ENST00000543079 POLR3EQ9NVU0 708 aa11.3□□□□□ -0.6
PAAF1-212ENST00000543079 PTPRMP28827 1452 aa11.3□□□□□ -0.6
PAAF1-212ENST00000543079 KIAA0586Q9BVV6 1533 aa11.3□□□□□ -0.6
PAAF1-212ENST00000543079 ALDH1A1P00352 501 aa11.29□□□□□ -0.6
PAAF1-212ENST00000543079 RTL5Q5HYW3 569 aaPredicted RBP11.29□□□□□ -0.6
PAAF1-212ENST00000543079 PER1O15534 1290 aaPredicted RBP11.28□□□□□ -0.6
PAAF1-212ENST00000543079 TSC1Q92574 1164 aa11.28□□□□□ -0.6
PAAF1-212ENST00000543079 DDRGK1Q96HY6 314 aa11.28□□□□□ -0.6
PAAF1-212ENST00000543079 TNIKQ9UKE5 1360 aa11.28□□□□□ -0.6
PAAF1-212ENST00000543079 VARSP26640 1264 aaKnown RBP11.27□□□□□ -0.61
PAAF1-212ENST00000543079 SKIV2LQ15477 1246 aaKnown RBP11.27□□□□□ -0.61
PAAF1-212ENST00000543079 MAP10Q9P2G4 905 aa11.27□□□□□ -0.61
PAAF1-212ENST00000543079 ZNF775Q96BV0 537 aaPredicted RBP11.26□□□□□ -0.61
PAAF1-212ENST00000543079 FAM117AQ9C073 453 aa11.26□□□□□ -0.61
PAAF1-212ENST00000543079 EEA1Q15075 1411 aa11.26□□□□□ -0.61
PAAF1-212ENST00000543079 MAP3K4Q9Y6R4 1608 aa11.25□□□□□ -0.61
PAAF1-212ENST00000543079 FAM9AQ8IZU1 332 aaPredicted RBP11.25□□□□□ -0.61
PAAF1-212ENST00000543079 MPNDQ8N594 471 aa11.25□□□□□ -0.61
PAAF1-212ENST00000543079 HELBQ8NG08 1087 aaPredicted RBP11.25□□□□□ -0.61
PAAF1-212ENST00000543079 UACAQ9BZF9 1416 aa11.25□□□□□ -0.61
PAAF1-212ENST00000543079 SH3D19Q5HYK7 790 aa11.24□□□□□ -0.61
PAAF1-212ENST00000543079 GMPR2Q9P2T1 348 aaKnown RBP11.24□□□□□ -0.61
PAAF1-212ENST00000543079 WASF2Q9Y6W5 498 aa11.24□□□□□ -0.61
PAAF1-212ENST00000543079 UHRF1BP1LA0JNW5 1464 aa11.24□□□□□ -0.61
PAAF1-212ENST00000543079 PLEKHG3A1L390 1219 aa11.23□□□□□ -0.61
PAAF1-212ENST00000543079 PCF11O94913 1555 aaKnown RBP11.23□□□□□ -0.61
PAAF1-212ENST00000543079 CARMIL1Q5VZK9 1371 aa11.22□□□□□ -0.61
PAAF1-212ENST00000543079 ATP13A2Q9NQ11 1180 aa11.22□□□□□ -0.61
PAAF1-212ENST00000543079 PRXQ9BXM0 1461 aa11.21□□□□□ -0.61
PAAF1-212ENST00000543079 CARMIL2Q6F5E8 1435 aa11.21□□□□□ -0.61
PAAF1-212ENST00000543079 CD109Q6YHK3 1445 aa11.21□□□□□ -0.61
PAAF1-212ENST00000543079 ARMC2Q8NEN0 867 aa11.21□□□□□ -0.61
PAAF1-212ENST00000543079 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.21□□□□□ -0.61
PAAF1-212ENST00000543079 KIF21BO75037 1637 aa11.2□□□□□ -0.62
PAAF1-212ENST00000543079 C11orf95C9JLR9 678 aaPredicted RBP11.2□□□□□ -0.62
PAAF1-212ENST00000543079 FAM174AQ8TBP5 190 aa11.2□□□□□ -0.62
PAAF1-212ENST00000543079 FOXJ1Q92949 421 aa11.2□□□□□ -0.62
PAAF1-212ENST00000543079 CUL7Q14999 1698 aa11.2□□□□□ -0.62
PAAF1-212ENST00000543079 SPATA31D1Q6ZQQ2 1576 aa11.2□□□□□ -0.62
PAAF1-212ENST00000543079 KDM5BQ9UGL1 1544 aa11.19□□□□□ -0.62
PAAF1-212ENST00000543079 ARID4BQ4LE39 1312 aaPredicted RBP11.19□□□□□ -0.62
PAAF1-212ENST00000543079 PROCA1Q8NCQ7 364 aaPredicted RBP11.19□□□□□ -0.62
PAAF1-212ENST00000543079 TLL2Q9Y6L7 1015 aa11.19□□□□□ -0.62
PAAF1-212ENST00000543079 CTDSPL2Q05D32 466 aa11.18□□□□□ -0.62
PAAF1-212ENST00000543079 ADAMTSL3P82987 1691 aa11.17□□□□□ -0.62
PAAF1-212ENST00000543079 PPP2R2DQ66LE6 453 aa11.17□□□□□ -0.62
PAAF1-212ENST00000543079 BPHLQ86WA6 291 aaPredicted RBP11.17□□□□□ -0.62
PAAF1-212ENST00000543079 MAGI3Q5TCQ9 1506 aa11.17□□□□□ -0.62
PAAF1-212ENST00000543079 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
PAAF1-212ENST00000543079 CDK15Q96Q40 435 aa11.16□□□□□ -0.62
PAAF1-212ENST00000543079 SENP2Q9HC62 589 aa11.16□□□□□ -0.62
PAAF1-212ENST00000543079 RAPGEF2Q9Y4G8 1499 aa11.16□□□□□ -0.62
PAAF1-212ENST00000543079 CAPN5O15484 640 aaPredicted RBP11.15□□□□□ -0.62
PAAF1-212ENST00000543079 AGERQ15109 404 aa11.15□□□□□ -0.62
PAAF1-212ENST00000543079 C4orf48Q5BLP8 95 aa11.15□□□□□ -0.62
PAAF1-212ENST00000543079 RAPGEF3O95398 923 aa11.14□□□□□ -0.63
PAAF1-212ENST00000543079 NBPF14Q5TI25 921 aa11.14□□□□□ -0.63
PAAF1-212ENST00000543079 TRIM47Q96LD4 638 aa11.14□□□□□ -0.63
PAAF1-212ENST00000543079 ATP1B4Q9UN42 357 aaPredicted RBP11.14□□□□□ -0.63
PAAF1-212ENST00000543079 WDR7Q9Y4E6 1490 aa11.13□□□□□ -0.63
PAAF1-212ENST00000543079 ADH1CP00326 375 aa11.13□□□□□ -0.63
PAAF1-212ENST00000543079 NNTQ13423 1086 aa11.13□□□□□ -0.63
PAAF1-212ENST00000543079 SH3RF1Q7Z6J0 888 aa11.13□□□□□ -0.63
PAAF1-212ENST00000543079 GPKOWQ92917 476 aaPredicted RBP eCLIP11.13□□□□□ -0.63
PAAF1-212ENST00000543079 KIFC2Q96AC6 838 aa11.13□□□□□ -0.63
PAAF1-212ENST00000543079 ZCCHC11Q5TAX3 1644 aaKnown RBP11.11□□□□□ -0.63
PAAF1-212ENST00000543079 SNRPBP14678 240 aaKnown RBP11.11□□□□□ -0.63
PAAF1-212ENST00000543079 SH3BP5LQ7L8J4 393 aa11.11□□□□□ -0.63
PAAF1-212ENST00000543079 LRRN4Q8WUT4 740 aa11.11□□□□□ -0.63
PAAF1-212ENST00000543079 GOPCQ9HD26 462 aa11.11□□□□□ -0.63
PAAF1-212ENST00000543079 ARAP3Q8WWN8 1544 aa11.1□□□□□ -0.63
PAAF1-212ENST00000543079 ARID5BQ14865 1188 aa11.1□□□□□ -0.63
PAAF1-212ENST00000543079 C1QTNF2Q9BXJ5 285 aa11.1□□□□□ -0.63
PAAF1-212ENST00000543079 NR5A1Q13285 461 aa11.09□□□□□ -0.63
PAAF1-212ENST00000543079 KLF16Q9BXK1 252 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms