RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 ARHGEF10O15013 1369 aa16.82■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 PRR36Q9H6K5 1346 aa16.82■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 ZBTB7AO95365 584 aa16.82■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 TMC1Q8TDI8 760 aa16.82■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 ANO8Q9HCE9 1232 aaPredicted RBP16.82■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 A0A1W2PP64 1363 aa16.81■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 PLEKHG3A1L390 1219 aa16.81■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 ANP32CO43423 234 aa16.81■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 SLC34A2O95436 690 aa16.81■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 SLC12A5Q9H2X9 1139 aa16.81■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 CRYBG1Q9Y4K1 1723 aa16.8■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 HDGFL2Q7Z4V5 671 aaPredicted RBP16.8■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 KNSTRNQ9Y448 316 aa16.8■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 NSD2O96028 1365 aa16.79■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 POLR3AO14802 1390 aaPredicted RBP16.78■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 BRD4O60885 1362 aaPredicted RBP16.78■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 SPATA31A1Q5TZJ5 1347 aa16.78■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 HSPA6P17066 643 aa16.78■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 CABP1Q9NZU7 370 aa16.78■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 EDC4Q6P2E9 1401 aaKnown RBP16.78■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 NSD3Q9BZ95 1437 aa16.78■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 MAP3K5Q99683 1374 aa16.77■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 TRPM3Q9HCF6 1732 aaPredicted RBP16.77■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 PSME1Q06323 249 aa16.77■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 ALS2Q96Q42 1657 aa16.77■□□□□ 0.28
CACNA1C-IT3-201ENST00000542680 SBF2Q86WG5 1849 aa16.77■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 SGIP1Q9BQI5 828 aa16.76■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 ANKRD26Q9UPS8 1709 aa16.76■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 KIF20BQ96Q89 1820 aa16.75■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 CGNL1Q0VF96 1302 aa16.75■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 RALBP1Q15311 655 aa16.75■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 PRKRIP1Q9H875 184 aaPredicted RBP16.75■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 LMOD2Q6P5Q4 547 aa16.74■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 CARD14Q9BXL6 1004 aa16.74■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 PEAK1Q9H792 1746 aa16.73■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 USP6P35125 1406 aa16.73■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 CAPN15O75808 1086 aa16.72■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 PHF8Q9UPP1 1060 aa16.72■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 ACEP12821 1306 aa16.71■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 SSH2Q76I76 1423 aa16.71■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 CCER2I3L3R5 266 aa16.71■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 PDE3BQ13370 1112 aa16.71■□□□□ 0.27
CACNA1C-IT3-201ENST00000542680 GPR162Q16538 588 aa16.7■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 MIER1Q8N108 512 aa16.7■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 PARP4Q9UKK3 1724 aaKnown RBP16.7■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 TTC21AQ8NDW8 1320 aa16.7■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 USP54Q70EL1 1684 aa16.69■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 PLSCR1O15162 318 aa16.69■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 NGDNQ8NEJ9 315 aaKnown RBP16.69■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 PRELPP51888 382 aa16.68■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 BARGINQ6ZT62 677 aa16.68■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 MTFR1LQ9H019 292 aa16.68■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 MYBBP1AQ9BQG0 1328 aaKnown RBP16.68■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 ATP10DQ9P241 1426 aa16.67■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 PCNTO95613 3336 aa16.67■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 COL13A1Q5TAT6 717 aaPredicted RBP16.66■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 ARXQ96QS3 562 aa16.66■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 CC2D1BQ5T0F9 858 aaKnown RBP16.65■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 PMFBP1Q8TBY8 1022 aa16.65■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 BCL11BQ9C0K0 894 aaPredicted RBP16.65■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 TTC21BQ7Z4L5 1316 aa16.65■□□□□ 0.26
CACNA1C-IT3-201ENST00000542680 PROM2Q8N271 834 aa16.64■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 PRDM11Q9NQV5 511 aa16.64■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 USP31Q70CQ4 1352 aa16.64■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 PIK3C2AO00443 1686 aa16.63■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 FYB1O15117 783 aa16.63■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 NLRP13Q86W25 1043 aa16.63■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 OVOS2A0A0J9YW53 1432 aa16.62■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 OVOS2Q6IE36 1432 aa16.62■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 PHRF1Q9P1Y6 1649 aaKnown RBP16.62■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 OVOS2A0A0G2JMS6 1433 aa16.62■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 MORC1Q86VD1 984 aa16.61■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 STRN4Q9NRL3 753 aa16.61■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 USP35Q9P2H5 1018 aa16.61■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 COL24A1Q17RW2 1714 aa16.6■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 DNAJC5GQ8N7S2 189 aa16.6■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 KIAA0232Q92628 1395 aa16.6■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 SLC15A2Q16348 729 aa16.59■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 STK32BQ9NY57 414 aa16.59■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 AATKQ6ZMQ8 1374 aa16.59■□□□□ 0.25
CACNA1C-IT3-201ENST00000542680 PTF1AQ7RTS3 328 aa16.58■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 COG3Q96JB2 828 aa16.58■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 GPBP1L1Q9HC44 474 aaPredicted RBP16.58■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 PCDH10Q9P2E7 1040 aa16.58■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 LRRC37A3O60309 1634 aa16.58■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 MSH5O43196 834 aa16.57■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 PPP2R1AP30153 589 aa16.57■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 CHRNA2Q15822 529 aa16.57■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 PELP1Q8IZL8 1130 aaKnown RBP16.57■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 TNS4Q8IZW8 715 aa16.57■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 GGNBP2Q9H3C7 697 aa16.57■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 SMG6Q86US8 1419 aaKnown RBP16.56■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 ADCY9O60503 1353 aa16.56■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 NME9Q86XW9 330 aa16.56■□□□□ 0.24
CACNA1C-IT3-201ENST00000542680 TCP11L2Q8N4U5 519 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms