RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 GCP02774 474 aa12.57□□□□□ -0.4
TOP3A-208ENST00000542570 MTHFSDQ2M296 383 aaKnown RBP12.57□□□□□ -0.4
TOP3A-208ENST00000542570 RLBP1P12271 317 aa12.56□□□□□ -0.4
TOP3A-208ENST00000542570 CADPS2Q86UW7 1296 aa12.56□□□□□ -0.4
TOP3A-208ENST00000542570 PRDM15P57071 1507 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-208ENST00000542570 TMEM2Q9UHN6 1383 aa12.56□□□□□ -0.4
TOP3A-208ENST00000542570 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
TOP3A-208ENST00000542570 DDX58O95786 925 aaKnown RBP12.56□□□□□ -0.4
TOP3A-208ENST00000542570 ARHGEF5Q12774 1597 aa12.56□□□□□ -0.4
TOP3A-208ENST00000542570 IGHDP01880 384 aa12.56□□□□□ -0.4
TOP3A-208ENST00000542570 C19orf44Q9H6X5 657 aa12.55□□□□□ -0.4
TOP3A-208ENST00000542570 ASXL1Q8IXJ9 1541 aa12.55□□□□□ -0.4
TOP3A-208ENST00000542570 PLCB2Q00722 1185 aa12.55□□□□□ -0.4
TOP3A-208ENST00000542570 ANO2Q9NQ90 1003 aa12.55□□□□□ -0.4
TOP3A-208ENST00000542570 ISY1Q9ULR0 285 aaKnown RBP12.55□□□□□ -0.4
TOP3A-208ENST00000542570 ADCY10Q96PN6 1610 aa12.55□□□□□ -0.4
TOP3A-208ENST00000542570 COL17A1Q9UMD9 1497 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-208ENST00000542570 PREX2Q70Z35 1606 aa12.54□□□□□ -0.4
TOP3A-208ENST00000542570 TAF7Q15545 349 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-208ENST00000542570 CHMP4AQ9BY43 222 aa12.54□□□□□ -0.4
TOP3A-208ENST00000542570 GCC2Q8IWJ2 1684 aa12.54□□□□□ -0.4
TOP3A-208ENST00000542570 IFIT2P09913 472 aaKnown RBP12.54□□□□□ -0.4
TOP3A-208ENST00000542570 G3BP1Q13283 466 aaKnown RBP eCLIP12.54□□□□□ -0.4
TOP3A-208ENST00000542570 SPG7Q9UQ90 795 aa12.54□□□□□ -0.4
TOP3A-208ENST00000542570 TOMM22Q9NS69 142 aa12.53□□□□□ -0.4
TOP3A-208ENST00000542570 MAGI2Q86UL8 1455 aa12.53□□□□□ -0.4
TOP3A-208ENST00000542570 ZFYVE16Q7Z3T8 1539 aa12.53□□□□□ -0.4
TOP3A-208ENST00000542570 TSHZ3Q63HK5 1081 aa12.53□□□□□ -0.4
TOP3A-208ENST00000542570 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
TOP3A-208ENST00000542570 TULP1O00294 542 aaPredicted RBP12.53□□□□□ -0.4
TOP3A-208ENST00000542570 NGLY1Q96IV0 654 aa12.53□□□□□ -0.4
TOP3A-208ENST00000542570 LRPPRCP42704 1394 aaKnown RBP12.52□□□□□ -0.4
TOP3A-208ENST00000542570 CFAP44Q96MT7 982 aa12.52□□□□□ -0.4
TOP3A-208ENST00000542570 PCDHB15Q9Y5E8 787 aa12.52□□□□□ -0.4
TOP3A-208ENST00000542570 ATP5J2-PTCD1G3V325 749 aa12.52□□□□□ -0.41
TOP3A-208ENST00000542570 SRGAP3O43295 1099 aa12.52□□□□□ -0.41
TOP3A-208ENST00000542570 MCCP23508 829 aa12.52□□□□□ -0.41
TOP3A-208ENST00000542570 SRCIN1Q9C0H9 1055 aa12.52□□□□□ -0.41
TOP3A-208ENST00000542570 PTPRTO14522 1441 aa12.52□□□□□ -0.41
TOP3A-208ENST00000542570 MLH3Q9UHC1 1453 aa12.51□□□□□ -0.41
TOP3A-208ENST00000542570 UBAP1LF5GYI3 381 aa12.51□□□□□ -0.41
TOP3A-208ENST00000542570 PRR36Q9H6K5 1346 aa12.51□□□□□ -0.41
TOP3A-208ENST00000542570 GOLGA6L22H0YM25 854 aa12.51□□□□□ -0.41
TOP3A-208ENST00000542570 ANP32BQ92688 251 aaKnown RBP12.51□□□□□ -0.41
TOP3A-208ENST00000542570 GNAI2P04899 355 aa12.5□□□□□ -0.41
TOP3A-208ENST00000542570 ACSBG1Q96GR2 724 aa12.5□□□□□ -0.41
TOP3A-208ENST00000542570 ZBTB3Q9H5J0 574 aa12.5□□□□□ -0.41
TOP3A-208ENST00000542570 IFT57Q9NWB7 429 aa12.5□□□□□ -0.41
TOP3A-208ENST00000542570 ROBO2Q9HCK4 1378 aa12.5□□□□□ -0.41
TOP3A-208ENST00000542570 NFATC2IPQ8NCF5 419 aa12.5□□□□□ -0.41
TOP3A-208ENST00000542570 LGR6Q9HBX8 967 aa12.5□□□□□ -0.41
TOP3A-208ENST00000542570 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
TOP3A-208ENST00000542570 GPATCH3Q96I76 525 aa12.49□□□□□ -0.41
TOP3A-208ENST00000542570 CDC42BPBQ9Y5S2 1711 aa12.49□□□□□ -0.41
TOP3A-208ENST00000542570 PI4KAP2A4QPH2 592 aa12.49□□□□□ -0.41
TOP3A-208ENST00000542570 NUTM1Q86Y26 1132 aa12.49□□□□□ -0.41
TOP3A-208ENST00000542570 KLHL34Q8N239 644 aa12.49□□□□□ -0.41
TOP3A-208ENST00000542570 PI4KAP1Q8N8J0 262 aa12.49□□□□□ -0.41
TOP3A-208ENST00000542570 RSPH6AQ9H0K4 717 aa12.49□□□□□ -0.41
TOP3A-208ENST00000542570 DIAPH3Q9NSV4 1193 aa12.49□□□□□ -0.41
TOP3A-208ENST00000542570 HOXC9P31274 260 aa12.49□□□□□ -0.41
TOP3A-208ENST00000542570 CLASP1Q7Z460 1538 aa12.48□□□□□ -0.41
TOP3A-208ENST00000542570 GNAI3P08754 354 aa12.48□□□□□ -0.41
TOP3A-208ENST00000542570 NKTRP30414 1462 aaKnown RBP12.48□□□□□ -0.41
TOP3A-208ENST00000542570 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
TOP3A-208ENST00000542570 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
TOP3A-208ENST00000542570 GPTP24298 496 aa12.48□□□□□ -0.41
TOP3A-208ENST00000542570 IL13P35225 146 aa12.48□□□□□ -0.41
TOP3A-208ENST00000542570 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
TOP3A-208ENST00000542570 MSH6P52701 1360 aa12.48□□□□□ -0.41
TOP3A-208ENST00000542570 FLIIQ13045 1269 aa12.47□□□□□ -0.41
TOP3A-208ENST00000542570 DNAJC2Q99543 621 aaKnown RBP12.47□□□□□ -0.41
TOP3A-208ENST00000542570 MEIS3Q99687 375 aa12.47□□□□□ -0.41
TOP3A-208ENST00000542570 C22orf23Q9BZE7 217 aa12.47□□□□□ -0.41
TOP3A-208ENST00000542570 ADGBQ8N7X0 1667 aa12.47□□□□□ -0.41
TOP3A-208ENST00000542570 HDAC5Q9UQL6 1122 aa12.47□□□□□ -0.41
TOP3A-208ENST00000542570 KDM4AO75164 1064 aa12.47□□□□□ -0.41
TOP3A-208ENST00000542570 DNAJC5Q9H3Z4 198 aa12.47□□□□□ -0.41
TOP3A-208ENST00000542570 G2E3Q7L622 706 aa12.47□□□□□ -0.41
TOP3A-208ENST00000542570 STK11IPQ8N1F8 1099 aa12.47□□□□□ -0.41
TOP3A-208ENST00000542570 LRRFIP2Q9Y608 721 aaKnown RBP12.47□□□□□ -0.41
TOP3A-208ENST00000542570 MYD88Q99836 296 aa12.46□□□□□ -0.41
TOP3A-208ENST00000542570 BACH2Q9BYV9 841 aa12.46□□□□□ -0.41
TOP3A-208ENST00000542570 APPP05067 770 aa12.46□□□□□ -0.41
TOP3A-208ENST00000542570 C8orf37Q96NL8 207 aa12.46□□□□□ -0.41
TOP3A-208ENST00000542570 CHPF2Q9P2E5 772 aa12.46□□□□□ -0.41
TOP3A-208ENST00000542570 POLR3AO14802 1390 aaPredicted RBP12.46□□□□□ -0.41
TOP3A-208ENST00000542570 HSP90B1P14625 803 aaKnown RBP12.46□□□□□ -0.42
TOP3A-208ENST00000542570 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.42
TOP3A-208ENST00000542570 CLASRPQ8N2M8 674 aaKnown RBP12.46□□□□□ -0.42
TOP3A-208ENST00000542570 PHF23Q9BUL5 403 aaPredicted RBP12.46□□□□□ -0.42
TOP3A-208ENST00000542570 NPHP3Q7Z494 1330 aa12.46□□□□□ -0.42
TOP3A-208ENST00000542570 ABCC11Q96J66 1382 aa12.45□□□□□ -0.42
TOP3A-208ENST00000542570 VAMP4O75379 141 aa12.45□□□□□ -0.42
TOP3A-208ENST00000542570 PHAXQ9H814 394 aaKnown RBP12.45□□□□□ -0.42
TOP3A-208ENST00000542570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-208ENST00000542570 FOSBP53539 338 aa12.45□□□□□ -0.42
TOP3A-208ENST00000542570 NSD2O96028 1365 aa12.44□□□□□ -0.42
TOP3A-208ENST00000542570 TMOD3Q9NYL9 352 aa12.44□□□□□ -0.42
TOP3A-208ENST00000542570 ERVK-7P63135 1459 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms