RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 USP31Q70CQ4 1352 aa13.9□□□□□ -0.18
NECAP1-206ENST00000542095 ADAMTSL3P82987 1691 aa13.9□□□□□ -0.18
NECAP1-206ENST00000542095 ANKARQ7Z5J8 1434 aa13.9□□□□□ -0.18
NECAP1-206ENST00000542095 PEAK1Q9H792 1746 aa13.9□□□□□ -0.18
NECAP1-206ENST00000542095 SETD1BQ9UPS6 1966 aaKnown RBP13.89□□□□□ -0.19
NECAP1-206ENST00000542095 RLBP1P12271 317 aa13.89□□□□□ -0.19
NECAP1-206ENST00000542095 LMOD3Q0VAK6 560 aa13.89□□□□□ -0.19
NECAP1-206ENST00000542095 FTSJ3Q8IY81 847 aaKnown RBP13.89□□□□□ -0.19
NECAP1-206ENST00000542095 PMFBP1Q8TBY8 1022 aa13.89□□□□□ -0.19
NECAP1-206ENST00000542095 DZIP1LQ8IYY4 767 aaKnown RBP13.88□□□□□ -0.19
NECAP1-206ENST00000542095 TNNQ9UQP3 1299 aa13.88□□□□□ -0.19
NECAP1-206ENST00000542095 RGPD1P0DJD0 1748 aa13.88□□□□□ -0.19
NECAP1-206ENST00000542095 IGHDP01880 384 aa13.88□□□□□ -0.19
NECAP1-206ENST00000542095 MVPQ14764 893 aaKnown RBP13.88□□□□□ -0.19
NECAP1-206ENST00000542095 NGDNQ8NEJ9 315 aaKnown RBP13.88□□□□□ -0.19
NECAP1-206ENST00000542095 SSH1Q8WYL5 1049 aa13.88□□□□□ -0.19
NECAP1-206ENST00000542095 KCNA6P17658 529 aa13.87□□□□□ -0.19
NECAP1-206ENST00000542095 IPO9Q96P70 1041 aaKnown RBP13.87□□□□□ -0.19
NECAP1-206ENST00000542095 PIK3C2AO00443 1686 aa13.87□□□□□ -0.19
NECAP1-206ENST00000542095 GNAI1P63096 354 aa13.87□□□□□ -0.19
NECAP1-206ENST00000542095 EIF4A2Q14240 407 aaKnown RBP13.87□□□□□ -0.19
NECAP1-206ENST00000542095 ALDH1L2Q3SY69 923 aa13.87□□□□□ -0.19
NECAP1-206ENST00000542095 ANKLE2Q86XL3 938 aa13.87□□□□□ -0.19
NECAP1-206ENST00000542095 ZNF428Q96B54 188 aa13.87□□□□□ -0.19
NECAP1-206ENST00000542095 IFT57Q9NWB7 429 aa13.87□□□□□ -0.19
NECAP1-206ENST00000542095 VIRMAQ69YN4 1812 aaKnown RBP13.87□□□□□ -0.19
NECAP1-206ENST00000542095 LAS1LQ9Y4W2 734 aaKnown RBP13.86□□□□□ -0.19
NECAP1-206ENST00000542095 KIF16BQ96L93 1317 aa13.86□□□□□ -0.19
NECAP1-206ENST00000542095 ATF7IPQ6VMQ6 1270 aa13.85□□□□□ -0.19
NECAP1-206ENST00000542095 USP54Q70EL1 1684 aa13.85□□□□□ -0.19
NECAP1-206ENST00000542095 IPO8O15397 1037 aaKnown RBP13.85□□□□□ -0.19
NECAP1-206ENST00000542095 TRIM27P14373 513 aa13.85□□□□□ -0.19
NECAP1-206ENST00000542095 RGS3P49796 1198 aa13.85□□□□□ -0.19
NECAP1-206ENST00000542095 NOP58Q9Y2X3 529 aaKnown RBP13.85□□□□□ -0.19
NECAP1-206ENST00000542095 FAM161AQ3B820 660 aa13.84□□□□□ -0.19
NECAP1-206ENST00000542095 NOB1Q9ULX3 412 aaKnown RBP13.84□□□□□ -0.19
NECAP1-206ENST00000542095 SULT6B1Q6IMI4 303 aa13.83□□□□□ -0.19
NECAP1-206ENST00000542095 THUMPD2Q9BTF0 503 aaKnown RBP13.83□□□□□ -0.19
NECAP1-206ENST00000542095 ZNF853P0CG23 659 aa13.83□□□□□ -0.2
NECAP1-206ENST00000542095 NPM2Q86SE8 214 aaKnown RBP13.83□□□□□ -0.2
NECAP1-206ENST00000542095 DDX19BQ9UMR2 479 aa13.83□□□□□ -0.2
NECAP1-206ENST00000542095 PCDHB15Q9Y5E8 787 aa13.83□□□□□ -0.2
NECAP1-206ENST00000542095 MARF1Q9Y4F3 1742 aaKnown RBP13.83□□□□□ -0.2
NECAP1-206ENST00000542095 SBNO1A3KN83 1393 aa13.82□□□□□ -0.2
NECAP1-206ENST00000542095 FLT4P35916 1363 aa13.82□□□□□ -0.2
NECAP1-206ENST00000542095 BRPF1P55201 1214 aaPredicted RBP13.82□□□□□ -0.2
NECAP1-206ENST00000542095 RWDD1Q9H446 243 aaPredicted RBP13.82□□□□□ -0.2
NECAP1-206ENST00000542095 HSP90AB2PQ58FF8 381 aa13.82□□□□□ -0.2
NECAP1-206ENST00000542095 CFAP44Q96MT7 982 aa13.82□□□□□ -0.2
NECAP1-206ENST00000542095 ARHGEF10O15013 1369 aa13.81□□□□□ -0.2
NECAP1-206ENST00000542095 MAP3K19Q56UN5 1328 aa13.81□□□□□ -0.2
NECAP1-206ENST00000542095 SOX12O15370 315 aa13.81□□□□□ -0.2
NECAP1-206ENST00000542095 AEBP1Q8IUX7 1158 aa13.81□□□□□ -0.2
NECAP1-206ENST00000542095 ITPRIPQ8IWB1 547 aa13.81□□□□□ -0.2
NECAP1-206ENST00000542095 MBIPQ9NS73 344 aa13.81□□□□□ -0.2
NECAP1-206ENST00000542095 ZBTB47Q9UFB7 747 aaPredicted RBP13.81□□□□□ -0.2
NECAP1-206ENST00000542095 VAMP4O75379 141 aa13.8□□□□□ -0.2
NECAP1-206ENST00000542095 C8orf34Q49A92 452 aa13.8□□□□□ -0.2
NECAP1-206ENST00000542095 FAM83GA6ND36 823 aa13.79□□□□□ -0.2
NECAP1-206ENST00000542095 AMPHP49418 695 aa13.79□□□□□ -0.2
NECAP1-206ENST00000542095 NLRP6P59044 892 aa13.79□□□□□ -0.2
NECAP1-206ENST00000542095 KIF24Q5T7B8 1368 aa13.78□□□□□ -0.2
NECAP1-206ENST00000542095 TMEM57Q8N5G2 664 aa13.78□□□□□ -0.2
NECAP1-206ENST00000542095 TWISTNBQ3B726 338 aaPredicted RBP13.78□□□□□ -0.2
NECAP1-206ENST00000542095 MRPL50Q8N5N7 158 aaKnown RBP13.78□□□□□ -0.2
NECAP1-206ENST00000542095 ARHGAP45Q92619 1136 aa13.78□□□□□ -0.2
NECAP1-206ENST00000542095 NPHP4O75161 1426 aaPredicted RBP13.77□□□□□ -0.2
NECAP1-206ENST00000542095 DCTN1Q14203 1278 aa13.77□□□□□ -0.21
NECAP1-206ENST00000542095 TSPYL6Q8N831 410 aa13.77□□□□□ -0.21
NECAP1-206ENST00000542095 ADGRL3Q9HAR2 1447 aa13.77□□□□□ -0.21
NECAP1-206ENST00000542095 PAK3O75914 559 aaPredicted RBP13.76□□□□□ -0.21
NECAP1-206ENST00000542095 PHF8Q9UPP1 1060 aa13.76□□□□□ -0.21
NECAP1-206ENST00000542095 LTN1O94822 1766 aa13.76□□□□□ -0.21
NECAP1-206ENST00000542095 HDAC1Q13547 482 aaPredicted RBP13.76□□□□□ -0.21
NECAP1-206ENST00000542095 DDRGK1Q96HY6 314 aa13.76□□□□□ -0.21
NECAP1-206ENST00000542095 KDRP35968 1356 aa13.76□□□□□ -0.21
NECAP1-206ENST00000542095 ABTB2Q8N961 1025 aa13.75□□□□□ -0.21
NECAP1-206ENST00000542095 CHMP4BQ9H444 224 aaKnown RBP13.75□□□□□ -0.21
NECAP1-206ENST00000542095 PDZRN3Q9UPQ7 1066 aa13.75□□□□□ -0.21
NECAP1-206ENST00000542095 HAP1P54257 671 aaPredicted RBP13.75□□□□□ -0.21
NECAP1-206ENST00000542095 ZBTB40Q9NUA8 1239 aa13.75□□□□□ -0.21
NECAP1-206ENST00000542095 IGSF1Q8N6C5 1336 aa13.75□□□□□ -0.21
NECAP1-206ENST00000542095 ELL2O00472 640 aaPredicted RBP13.74□□□□□ -0.21
NECAP1-206ENST00000542095 C8orf58Q8NAV2 365 aa13.74□□□□□ -0.21
NECAP1-206ENST00000542095 NWD1Q149M9 1564 aa13.73□□□□□ -0.21
NECAP1-206ENST00000542095 CHL1O00533 1208 aa13.73□□□□□ -0.21
NECAP1-206ENST00000542095 HOXC9P31274 260 aa13.73□□□□□ -0.21
NECAP1-206ENST00000542095 NUTM2GQ5VZR2 741 aa13.73□□□□□ -0.21
NECAP1-206ENST00000542095 MCM10Q7L590 875 aa13.73□□□□□ -0.21
NECAP1-206ENST00000542095 EYA1Q99502 592 aa13.73□□□□□ -0.21
NECAP1-206ENST00000542095 RTL1A6NKG5 1358 aa13.72□□□□□ -0.21
NECAP1-206ENST00000542095 KIAA0232Q92628 1395 aa13.72□□□□□ -0.21
NECAP1-206ENST00000542095 C14orf37Q86TY3 774 aa13.72□□□□□ -0.21
NECAP1-206ENST00000542095 GAS2L2Q8NHY3 880 aa13.72□□□□□ -0.21
NECAP1-206ENST00000542095 RTF1Q92541 710 aaKnown RBP13.72□□□□□ -0.21
NECAP1-206ENST00000542095 API5Q9BZZ5 524 aaKnown RBP13.72□□□□□ -0.21
NECAP1-206ENST00000542095 CRB1P82279 1406 aa13.71□□□□□ -0.21
NECAP1-206ENST00000542095 MTHFSDQ2M296 383 aaKnown RBP13.71□□□□□ -0.21
NECAP1-206ENST00000542095 ABCC4O15439 1325 aa13.71□□□□□ -0.21
NECAP1-206ENST00000542095 RBM33Q96EV2 1170 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms