RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 BOLA1Q9Y3E2 137 aa9.03□□□□□ -0.96
EPHA4-214ENST00000541600 MYBBP1AQ9BQG0 1328 aaKnown RBP9.03□□□□□ -0.96
EPHA4-214ENST00000541600 PARD3Q8TEW0 1356 aa9.02□□□□□ -0.97
EPHA4-214ENST00000541600 TRPM2O94759 1503 aa9.02□□□□□ -0.97
EPHA4-214ENST00000541600 ROBO1Q9Y6N7 1651 aa9.02□□□□□ -0.97
EPHA4-214ENST00000541600 PER1O15534 1290 aaPredicted RBP9.02□□□□□ -0.97
EPHA4-214ENST00000541600 SERPINA10Q9UK55 444 aa9.02□□□□□ -0.97
EPHA4-214ENST00000541600 RGS12O14924 1447 aa9.02□□□□□ -0.97
EPHA4-214ENST00000541600 KIAA1210Q9ULL0 1709 aa9.02□□□□□ -0.97
EPHA4-214ENST00000541600 TET3O43151 1660 aa9.01□□□□□ -0.97
EPHA4-214ENST00000541600 TBC1D12O60347 775 aa9.01□□□□□ -0.97
EPHA4-214ENST00000541600 TESK2Q96S53 571 aa9.01□□□□□ -0.97
EPHA4-214ENST00000541600 GPCPD1Q9NPB8 672 aa9.01□□□□□ -0.97
EPHA4-214ENST00000541600 CDK12Q9NYV4 1490 aaPredicted RBP9.01□□□□□ -0.97
EPHA4-214ENST00000541600 ZC3H13Q5T200 1668 aaKnown RBP9□□□□□ -0.97
EPHA4-214ENST00000541600 TNRQ92752 1358 aa9□□□□□ -0.97
EPHA4-214ENST00000541600 SYNMO15061 1565 aa9□□□□□ -0.97
EPHA4-214ENST00000541600 INO80Q9ULG1 1556 aaPredicted RBP9□□□□□ -0.97
EPHA4-214ENST00000541600 RAD21O60216 631 aa9□□□□□ -0.97
EPHA4-214ENST00000541600 LTKP29376 864 aa9□□□□□ -0.97
EPHA4-214ENST00000541600 ZNF772Q68DY9 489 aaPredicted RBP9□□□□□ -0.97
EPHA4-214ENST00000541600 FAM9BQ8IZU0 186 aa9□□□□□ -0.97
EPHA4-214ENST00000541600 POM121Q96HA1 1249 aa9□□□□□ -0.97
EPHA4-214ENST00000541600 NUDCQ9Y266 331 aa9□□□□□ -0.97
EPHA4-214ENST00000541600 IQGAP1P46940 1657 aa9□□□□□ -0.97
EPHA4-214ENST00000541600 CEP152O94986 1710 aa9□□□□□ -0.97
EPHA4-214ENST00000541600 JCADQ9P266 1359 aa8.99□□□□□ -0.97
EPHA4-214ENST00000541600 EVI5O60447 810 aa8.99□□□□□ -0.97
EPHA4-214ENST00000541600 PDE3BQ13370 1112 aa8.99□□□□□ -0.97
EPHA4-214ENST00000541600 NLRP13Q86W25 1043 aa8.99□□□□□ -0.97
EPHA4-214ENST00000541600 CCDC97Q96F63 343 aaPredicted RBP8.99□□□□□ -0.97
EPHA4-214ENST00000541600 SPHKAPQ2M3C7 1700 aa8.99□□□□□ -0.97
EPHA4-214ENST00000541600 SPAG9O60271 1321 aaKnown RBP8.99□□□□□ -0.97
EPHA4-214ENST00000541600 SSTR3P32745 418 aaPredicted RBP8.98□□□□□ -0.97
EPHA4-214ENST00000541600 MDM2Q00987 491 aaPredicted RBP8.98□□□□□ -0.97
EPHA4-214ENST00000541600 THEMISQ8N1K5 641 aaPredicted RBP8.98□□□□□ -0.97
EPHA4-214ENST00000541600 KCTD17Q8N5Z5 321 aa8.98□□□□□ -0.97
EPHA4-214ENST00000541600 TMC1Q8TDI8 760 aa8.98□□□□□ -0.97
EPHA4-214ENST00000541600 NPDC1Q9NQX5 325 aaPredicted RBP8.98□□□□□ -0.97
EPHA4-214ENST00000541600 LMTK2Q8IWU2 1503 aa8.98□□□□□ -0.97
EPHA4-214ENST00000541600 TMEM94Q12767 1356 aa8.98□□□□□ -0.97
EPHA4-214ENST00000541600 NPC1L1Q9UHC9 1359 aa8.98□□□□□ -0.97
EPHA4-214ENST00000541600 IRX5P78411 483 aaPredicted RBP8.97□□□□□ -0.97
EPHA4-214ENST00000541600 ZNF326Q5BKZ1 582 aaKnown RBP8.97□□□□□ -0.97
EPHA4-214ENST00000541600 PROCA1Q8NCQ7 364 aaPredicted RBP8.97□□□□□ -0.97
EPHA4-214ENST00000541600 PHOX2BQ99453 314 aa8.97□□□□□ -0.97
EPHA4-214ENST00000541600 RBM19Q9Y4C8 960 aaKnown RBP8.97□□□□□ -0.97
EPHA4-214ENST00000541600 FANCIQ9NVI1 1328 aa8.97□□□□□ -0.97
EPHA4-214ENST00000541600 COL16A1Q07092 1604 aaPredicted RBP8.97□□□□□ -0.97
EPHA4-214ENST00000541600 UTRNP46939 3433 aa8.97□□□□□ -0.97
EPHA4-214ENST00000541600 ATP7AQ04656 1500 aa8.96□□□□□ -0.97
EPHA4-214ENST00000541600 SPDYE5A6NIY4 337 aa8.96□□□□□ -0.98
EPHA4-214ENST00000541600 G3V3G9 751 aa8.96□□□□□ -0.98
EPHA4-214ENST00000541600 TMF1P82094 1093 aa8.96□□□□□ -0.98
EPHA4-214ENST00000541600 NBPF1Q3BBV0 1214 aa8.96□□□□□ -0.98
EPHA4-214ENST00000541600 CDCA8Q53HL2 280 aa8.96□□□□□ -0.98
EPHA4-214ENST00000541600 BEGAINQ9BUH8 593 aa8.96□□□□□ -0.98
EPHA4-214ENST00000541600 OCEL1Q9H607 264 aa8.96□□□□□ -0.98
EPHA4-214ENST00000541600 C19orf67A6NJJ6 358 aa8.95□□□□□ -0.98
EPHA4-214ENST00000541600 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.95□□□□□ -0.98
EPHA4-214ENST00000541600 KANK1Q14678 1352 aa8.95□□□□□ -0.98
EPHA4-214ENST00000541600 MYOM2P54296 1465 aa8.95□□□□□ -0.98
EPHA4-214ENST00000541600 UGGT1Q9NYU2 1555 aa8.95□□□□□ -0.98
EPHA4-214ENST00000541600 CDHR5Q9HBB8 845 aa8.94□□□□□ -0.98
EPHA4-214ENST00000541600 PLSCR2Q9NRY7 297 aa8.94□□□□□ -0.98
EPHA4-214ENST00000541600 POLR3EQ9NVU0 708 aa8.94□□□□□ -0.98
EPHA4-214ENST00000541600 SLAIN2Q9P270 581 aa8.94□□□□□ -0.98
EPHA4-214ENST00000541600 COG6Q9Y2V7 657 aa8.94□□□□□ -0.98
EPHA4-214ENST00000541600 AFF2P51816 1311 aa8.94□□□□□ -0.98
EPHA4-214ENST00000541600 SCAF11Q99590 1463 aaKnown RBP8.94□□□□□ -0.98
EPHA4-214ENST00000541600 MROH1Q8NDA8 1641 aa8.94□□□□□ -0.98
EPHA4-214ENST00000541600 PHLPP1O60346 1717 aa8.94□□□□□ -0.98
EPHA4-214ENST00000541600 CEP350Q5VT06 3117 aa8.93□□□□□ -0.98
EPHA4-214ENST00000541600 NUTM2BA6NNL0 878 aaPredicted RBP8.93□□□□□ -0.98
EPHA4-214ENST00000541600 NUTM2EB1AL46 878 aaPredicted RBP8.93□□□□□ -0.98
EPHA4-214ENST00000541600 EN1Q05925 392 aaPredicted RBP8.93□□□□□ -0.98
EPHA4-214ENST00000541600 NUTM2DQ5VT03 806 aaPredicted RBP8.93□□□□□ -0.98
EPHA4-214ENST00000541600 TMEM92Q6UXU6 159 aa8.93□□□□□ -0.98
EPHA4-214ENST00000541600 NUTM2AQ8IVF1 878 aaPredicted RBP8.93□□□□□ -0.98
EPHA4-214ENST00000541600 ANO8Q9HCE9 1232 aaPredicted RBP8.93□□□□□ -0.98
EPHA4-214ENST00000541600 FAM217BQ9NTX9 383 aaPredicted RBP8.93□□□□□ -0.98
EPHA4-214ENST00000541600 BLMP54132 1417 aaPredicted RBP8.93□□□□□ -0.98
EPHA4-214ENST00000541600 NRXN1Q9ULB1 1477 aa8.93□□□□□ -0.98
EPHA4-214ENST00000541600 CLTCL1P53675 1640 aa8.93□□□□□ -0.98
EPHA4-214ENST00000541600 SBNO2Q9Y2G9 1366 aa8.92□□□□□ -0.98
EPHA4-214ENST00000541600 SPATA31A6Q5VVP1 1343 aa8.92□□□□□ -0.98
EPHA4-214ENST00000541600 RGL3Q3MIN7 710 aa8.92□□□□□ -0.98
EPHA4-214ENST00000541600 BANK1Q8NDB2 785 aa8.92□□□□□ -0.98
EPHA4-214ENST00000541600 BCL11AQ9H165 835 aa8.92□□□□□ -0.98
EPHA4-214ENST00000541600 QTRT2Q9H974 415 aaKnown RBP8.92□□□□□ -0.98
EPHA4-214ENST00000541600 IFT172Q9UG01 1749 aa8.91□□□□□ -0.98
EPHA4-214ENST00000541600 IER5LQ5T953 404 aa8.91□□□□□ -0.98
EPHA4-214ENST00000541600 MEX3CQ5U5Q3 659 aaKnown RBP8.91□□□□□ -0.98
EPHA4-214ENST00000541600 MYSM1Q5VVJ2 828 aa8.91□□□□□ -0.98
EPHA4-214ENST00000541600 PTCD2Q8WV60 388 aaKnown RBP8.91□□□□□ -0.98
EPHA4-214ENST00000541600 EPAS1Q99814 870 aa8.91□□□□□ -0.98
EPHA4-214ENST00000541600 ANP32EQ9BTT0 268 aa8.91□□□□□ -0.98
EPHA4-214ENST00000541600 EFCAB6Q5THR3 1501 aa8.9□□□□□ -0.98
EPHA4-214ENST00000541600 GALR2O43603 387 aaPredicted RBP8.9□□□□□ -0.98
EPHA4-214ENST00000541600 RBM6P78332 1123 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms