RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 PODXL2Q9NZ53 605 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 LRP2BPQ9P2M1 347 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 RABEP1Q15276 862 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 SPC24Q8NBT2 197 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 FERMT2Q96AC1 680 aa11.84□□□□□ -0.51
TRERF1-205ENST00000541110 DDX23Q9BUQ8 820 aaKnown RBP11.84□□□□□ -0.51
TRERF1-205ENST00000541110 TDRD9Q8NDG6 1382 aaKnown RBP11.84□□□□□ -0.51
TRERF1-205ENST00000541110 JAKMIP3Q5VZ66 844 aa11.83□□□□□ -0.52
TRERF1-205ENST00000541110 KIAA0754O94854 1291 aa11.83□□□□□ -0.52
TRERF1-205ENST00000541110 NACADO15069 1562 aa11.83□□□□□ -0.52
TRERF1-205ENST00000541110 EPB41L2O43491 1005 aaKnown RBP11.83□□□□□ -0.52
TRERF1-205ENST00000541110 L3MBTL2Q969R5 705 aa11.83□□□□□ -0.52
TRERF1-205ENST00000541110 SEC63Q9UGP8 760 aaKnown RBP11.83□□□□□ -0.52
TRERF1-205ENST00000541110 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.52
TRERF1-205ENST00000541110 ZMYND15Q9H091 742 aa11.83□□□□□ -0.52
TRERF1-205ENST00000541110 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
TRERF1-205ENST00000541110 CCP110O43303 1012 aa11.82□□□□□ -0.52
TRERF1-205ENST00000541110 NOL7Q9UMY1 257 aaKnown RBP11.82□□□□□ -0.52
TRERF1-205ENST00000541110 CEP63Q96MT8 703 aa11.82□□□□□ -0.52
TRERF1-205ENST00000541110 DACH1Q9UI36 760 aa11.82□□□□□ -0.52
TRERF1-205ENST00000541110 MTHFSP49914 203 aa11.81□□□□□ -0.52
TRERF1-205ENST00000541110 ZNF354CQ86Y25 554 aa11.81□□□□□ -0.52
TRERF1-205ENST00000541110 TIMELESSQ9UNS1 1208 aa11.81□□□□□ -0.52
TRERF1-205ENST00000541110 POLR3DP05423 398 aaPredicted RBP11.81□□□□□ -0.52
TRERF1-205ENST00000541110 RNF214Q8ND24 703 aa11.81□□□□□ -0.52
TRERF1-205ENST00000541110 RUNDC1Q96C34 613 aa11.81□□□□□ -0.52
TRERF1-205ENST00000541110 UBAC1Q9BSL1 405 aa11.81□□□□□ -0.52
TRERF1-205ENST00000541110 DHX57Q6P158 1386 aaKnown RBP11.81□□□□□ -0.52
TRERF1-205ENST00000541110 CECR2Q9BXF3 1484 aa11.81□□□□□ -0.52
TRERF1-205ENST00000541110 CBX1P83916 185 aa11.81□□□□□ -0.52
TRERF1-205ENST00000541110 SSX2IPQ9Y2D8 614 aa11.81□□□□□ -0.52
TRERF1-205ENST00000541110 ECM2O94769 699 aaPredicted RBP11.81□□□□□ -0.52
TRERF1-205ENST00000541110 UBA5Q9GZZ9 404 aa11.81□□□□□ -0.52
TRERF1-205ENST00000541110 RSPH6AQ9H0K4 717 aa11.81□□□□□ -0.52
TRERF1-205ENST00000541110 ZSCAN25Q6NSZ9 544 aa11.81□□□□□ -0.52
TRERF1-205ENST00000541110 TRMT1LQ7Z2T5 733 aaKnown RBP11.81□□□□□ -0.52
TRERF1-205ENST00000541110 KIAA1328Q86T90 577 aa11.81□□□□□ -0.52
TRERF1-205ENST00000541110 IGHMBP2P38935 993 aaKnown RBP11.8□□□□□ -0.52
TRERF1-205ENST00000541110 KIF7Q2M1P5 1343 aa11.8□□□□□ -0.52
TRERF1-205ENST00000541110 PPP1R12BO60237 982 aaPredicted RBP11.8□□□□□ -0.52
TRERF1-205ENST00000541110 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.8□□□□□ -0.52
TRERF1-205ENST00000541110 CCDC85AQ96PX6 553 aaPredicted RBP11.8□□□□□ -0.52
TRERF1-205ENST00000541110 CCDC113Q9H0I3 377 aa11.8□□□□□ -0.52
TRERF1-205ENST00000541110 SPG7Q9UQ90 795 aa11.8□□□□□ -0.52
TRERF1-205ENST00000541110 CETN2P41208 172 aa11.8□□□□□ -0.52
TRERF1-205ENST00000541110 JMYQ8N9B5 988 aa11.8□□□□□ -0.52
TRERF1-205ENST00000541110 CTNNBL1Q8WYA6 563 aaPredicted RBP11.8□□□□□ -0.52
TRERF1-205ENST00000541110 ME1P48163 572 aa11.8□□□□□ -0.52
TRERF1-205ENST00000541110 JPH4Q96JJ6 628 aa11.8□□□□□ -0.52
TRERF1-205ENST00000541110 LETM1O95202 739 aaPredicted RBP11.8□□□□□ -0.52
TRERF1-205ENST00000541110 CEP57L1Q8IYX8 460 aa11.8□□□□□ -0.52
TRERF1-205ENST00000541110 ABCF2Q9UG63 623 aa11.8□□□□□ -0.52
TRERF1-205ENST00000541110 LRSAM1Q6UWE0 723 aa11.79□□□□□ -0.52
TRERF1-205ENST00000541110 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
TRERF1-205ENST00000541110 GSE1Q14687 1217 aa11.79□□□□□ -0.52
TRERF1-205ENST00000541110 GOPCQ9HD26 462 aa11.79□□□□□ -0.52
TRERF1-205ENST00000541110 INCENPQ9NQS7 918 aa11.79□□□□□ -0.52
TRERF1-205ENST00000541110 CLEC11AQ9Y240 323 aa11.79□□□□□ -0.52
TRERF1-205ENST00000541110 PDE4AP27815 886 aa11.79□□□□□ -0.52
TRERF1-205ENST00000541110 GAS2L2Q8NHY3 880 aa11.79□□□□□ -0.52
TRERF1-205ENST00000541110 GGNBP2Q9H3C7 697 aa11.79□□□□□ -0.52
TRERF1-205ENST00000541110 RGS22Q8NE09 1264 aa11.78□□□□□ -0.52
TRERF1-205ENST00000541110 DYDC1Q8WWB3 177 aa11.78□□□□□ -0.52
TRERF1-205ENST00000541110 PPM1EQ8WY54 764 aa11.78□□□□□ -0.52
TRERF1-205ENST00000541110 TXNDC2Q86VQ3 553 aa11.78□□□□□ -0.52
TRERF1-205ENST00000541110 EXOC6Q8TAG9 804 aa11.78□□□□□ -0.52
TRERF1-205ENST00000541110 RRP1P56182 461 aaKnown RBP11.78□□□□□ -0.52
TRERF1-205ENST00000541110 CCDC39Q9UFE4 941 aa11.78□□□□□ -0.52
TRERF1-205ENST00000541110 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
TRERF1-205ENST00000541110 CCDC96Q2M329 555 aa11.78□□□□□ -0.52
TRERF1-205ENST00000541110 RPGRQ92834 1020 aaKnown RBP11.78□□□□□ -0.52
TRERF1-205ENST00000541110 MKNK2Q9HBH9 465 aa11.78□□□□□ -0.52
TRERF1-205ENST00000541110 ZNF397Q8NF99 534 aaPredicted RBP11.78□□□□□ -0.52
TRERF1-205ENST00000541110 CUL5Q93034 780 aa11.78□□□□□ -0.52
TRERF1-205ENST00000541110 ZNF652Q9Y2D9 606 aa11.77□□□□□ -0.52
TRERF1-205ENST00000541110 DHX8Q14562 1220 aaKnown RBP11.77□□□□□ -0.53
TRERF1-205ENST00000541110 MACROD2A1Z1Q3 448 aa11.77□□□□□ -0.53
TRERF1-205ENST00000541110 CTNNA2P26232 953 aa11.77□□□□□ -0.53
TRERF1-205ENST00000541110 SLC26A8Q96RN1 970 aa11.77□□□□□ -0.53
TRERF1-205ENST00000541110 ABCC8Q09428 1581 aa11.77□□□□□ -0.53
TRERF1-205ENST00000541110 EIF5P55010 431 aaKnown RBP11.77□□□□□ -0.53
TRERF1-205ENST00000541110 C22orf23Q9BZE7 217 aa11.77□□□□□ -0.53
TRERF1-205ENST00000541110 PDCP20941 246 aa11.76□□□□□ -0.53
TRERF1-205ENST00000541110 UBE4AQ14139 1066 aa11.76□□□□□ -0.53
TRERF1-205ENST00000541110 ZNF287Q9HBT7 754 aa11.76□□□□□ -0.53
TRERF1-205ENST00000541110 FIBPO43427 364 aa11.76□□□□□ -0.53
TRERF1-205ENST00000541110 CDC45O75419 566 aa11.76□□□□□ -0.53
TRERF1-205ENST00000541110 ADAMTS2O95450 1211 aa11.76□□□□□ -0.53
TRERF1-205ENST00000541110 TAF4BQ92750 862 aa11.76□□□□□ -0.53
TRERF1-205ENST00000541110 TNNT1P13805 278 aa11.76□□□□□ -0.53
TRERF1-205ENST00000541110 ARL1P40616 181 aaPredicted RBP11.76□□□□□ -0.53
TRERF1-205ENST00000541110 NASPP49321 788 aaPredicted RBP11.76□□□□□ -0.53
TRERF1-205ENST00000541110 KANK4Q5T7N3 995 aaPredicted RBP11.76□□□□□ -0.53
TRERF1-205ENST00000541110 IQCEQ6IPM2 695 aa11.76□□□□□ -0.53
TRERF1-205ENST00000541110 GNAI2P04899 355 aa11.76□□□□□ -0.53
TRERF1-205ENST00000541110 SMC1AQ14683 1233 aaKnown RBP11.76□□□□□ -0.53
TRERF1-205ENST00000541110 GIGYF2Q6Y7W6 1299 aaKnown RBP11.76□□□□□ -0.53
TRERF1-205ENST00000541110 C1orf115Q9H7X2 142 aa11.76□□□□□ -0.53
TRERF1-205ENST00000541110 RFX1P22670 979 aa11.75□□□□□ -0.53
TRERF1-205ENST00000541110 XPCQ01831 940 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms