RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 ARHGEF12Q9NZN5 1544 aa11.75□□□□□ -0.53
TTC39C-203ENST00000540918 ZRSR1Q15695 479 aaKnown RBP11.74□□□□□ -0.53
TTC39C-203ENST00000540918 HDAC5Q9UQL6 1122 aa11.74□□□□□ -0.53
TTC39C-203ENST00000540918 SRGAP3O43295 1099 aa11.74□□□□□ -0.53
TTC39C-203ENST00000540918 C22orf23Q9BZE7 217 aa11.74□□□□□ -0.53
TTC39C-203ENST00000540918 G3V3G9 751 aa11.73□□□□□ -0.53
TTC39C-203ENST00000540918 DCAF8Q5TAQ9 597 aa11.73□□□□□ -0.53
TTC39C-203ENST00000540918 TSHZ3Q63HK5 1081 aa11.73□□□□□ -0.53
TTC39C-203ENST00000540918 STK11IPQ8N1F8 1099 aa11.73□□□□□ -0.53
TTC39C-203ENST00000540918 C8orf58Q8NAV2 365 aa11.73□□□□□ -0.53
TTC39C-203ENST00000540918 KCNH5Q8NCM2 988 aa11.73□□□□□ -0.53
TTC39C-203ENST00000540918 ANKRD24Q8TF21 1146 aa11.73□□□□□ -0.53
TTC39C-203ENST00000540918 DNAJC2Q99543 621 aaKnown RBP11.73□□□□□ -0.53
TTC39C-203ENST00000540918 SRCIN1Q9C0H9 1055 aa11.73□□□□□ -0.53
TTC39C-203ENST00000540918 ABCA8O94911 1581 aa11.73□□□□□ -0.53
TTC39C-203ENST00000540918 TTC37Q6PGP7 1564 aa11.73□□□□□ -0.53
TTC39C-203ENST00000540918 IGHDP01880 384 aa11.73□□□□□ -0.53
TTC39C-203ENST00000540918 GNAI2P04899 355 aa11.72□□□□□ -0.53
TTC39C-203ENST00000540918 TAF7Q15545 349 aaPredicted RBP11.72□□□□□ -0.53
TTC39C-203ENST00000540918 CHD1O14646 1710 aa11.72□□□□□ -0.53
TTC39C-203ENST00000540918 SHANK2Q9UPX8 1470 aa11.72□□□□□ -0.53
TTC39C-203ENST00000540918 GNL2Q13823 731 aaKnown RBP11.72□□□□□ -0.53
TTC39C-203ENST00000540918 SPG7Q9UQ90 795 aa11.72□□□□□ -0.53
TTC39C-203ENST00000540918 FBXW7Q969H0 707 aa11.72□□□□□ -0.53
TTC39C-203ENST00000540918 NUTM1Q86Y26 1132 aa11.71□□□□□ -0.53
TTC39C-203ENST00000540918 ANKRD36BQ8N2N9 1353 aa11.71□□□□□ -0.53
TTC39C-203ENST00000540918 CHMP4CQ96CF2 233 aa11.71□□□□□ -0.53
TTC39C-203ENST00000540918 YTHDC2Q9H6S0 1430 aaKnown RBP11.71□□□□□ -0.53
TTC39C-203ENST00000540918 GNAI3P08754 354 aa11.71□□□□□ -0.54
TTC39C-203ENST00000540918 RLBP1P12271 317 aa11.71□□□□□ -0.54
TTC39C-203ENST00000540918 PARD3Q8TEW0 1356 aa11.71□□□□□ -0.54
TTC39C-203ENST00000540918 ATP5J2-PTCD1G3V325 749 aa11.71□□□□□ -0.54
TTC39C-203ENST00000540918 PHF23Q9BUL5 403 aaPredicted RBP11.71□□□□□ -0.54
TTC39C-203ENST00000540918 ADGRL2O95490 1459 aa11.71□□□□□ -0.54
TTC39C-203ENST00000540918 MAP3K19Q56UN5 1328 aa11.7□□□□□ -0.54
TTC39C-203ENST00000540918 MTHFSDQ2M296 383 aaKnown RBP11.7□□□□□ -0.54
TTC39C-203ENST00000540918 CLASRPQ8N2M8 674 aaKnown RBP11.7□□□□□ -0.54
TTC39C-203ENST00000540918 ST18O60284 1047 aa11.7□□□□□ -0.54
TTC39C-203ENST00000540918 EYA1Q99502 592 aa11.7□□□□□ -0.54
TTC39C-203ENST00000540918 RAD21O60216 631 aa11.7□□□□□ -0.54
TTC39C-203ENST00000540918 WASHC4Q2M389 1173 aa11.69□□□□□ -0.54
TTC39C-203ENST00000540918 VPS37DQ86XT2 251 aa11.69□□□□□ -0.54
TTC39C-203ENST00000540918 NGLY1Q96IV0 654 aa11.69□□□□□ -0.54
TTC39C-203ENST00000540918 ZBTB3Q9H5J0 574 aa11.69□□□□□ -0.54
TTC39C-203ENST00000540918 SAMD9LQ8IVG5 1584 aa11.69□□□□□ -0.54
TTC39C-203ENST00000540918 TSPOAP1O95153 1857 aa11.69□□□□□ -0.54
TTC39C-203ENST00000540918 MTMR7Q9Y216 660 aa11.69□□□□□ -0.54
TTC39C-203ENST00000540918 PCDHB15Q9Y5E8 787 aa11.69□□□□□ -0.54
TTC39C-203ENST00000540918 GCP02774 474 aa11.68□□□□□ -0.54
TTC39C-203ENST00000540918 CADPS2Q86UW7 1296 aa11.68□□□□□ -0.54
TTC39C-203ENST00000540918 BACH2Q9BYV9 841 aa11.68□□□□□ -0.54
TTC39C-203ENST00000540918 GPTP24298 496 aa11.68□□□□□ -0.54
TTC39C-203ENST00000540918 CFAP44Q96MT7 982 aa11.68□□□□□ -0.54
TTC39C-203ENST00000540918 ATP10AO60312 1499 aa11.68□□□□□ -0.54
TTC39C-203ENST00000540918 CHD1LQ86WJ1 897 aa11.68□□□□□ -0.54
TTC39C-203ENST00000540918 ACSBG1Q96GR2 724 aa11.67□□□□□ -0.54
TTC39C-203ENST00000540918 FSD1Q9BTV5 496 aa11.67□□□□□ -0.54
TTC39C-203ENST00000540918 PI4KAP2A4QPH2 592 aa11.67□□□□□ -0.54
TTC39C-203ENST00000540918 PI4KAP1Q8N8J0 262 aa11.67□□□□□ -0.54
TTC39C-203ENST00000540918 IFT57Q9NWB7 429 aa11.67□□□□□ -0.54
TTC39C-203ENST00000540918 PPP1R1BQ9UD71 204 aaPredicted RBP11.67□□□□□ -0.54
TTC39C-203ENST00000540918 MYD88Q99836 296 aa11.67□□□□□ -0.54
TTC39C-203ENST00000540918 LRRFIP2Q9Y608 721 aaKnown RBP11.67□□□□□ -0.54
TTC39C-203ENST00000540918 REC8O95072 547 aa11.66□□□□□ -0.54
TTC39C-203ENST00000540918 FLIIQ13045 1269 aa11.66□□□□□ -0.54
TTC39C-203ENST00000540918 DNTTIP2Q5QJE6 756 aaKnown RBP11.66□□□□□ -0.54
TTC39C-203ENST00000540918 GBP4Q96PP9 640 aa11.66□□□□□ -0.54
TTC39C-203ENST00000540918 TMX4Q9H1E5 349 aaPredicted RBP11.66□□□□□ -0.54
TTC39C-203ENST00000540918 METP08581 1390 aa11.66□□□□□ -0.54
TTC39C-203ENST00000540918 MCTP1Q6DN14 999 aa11.66□□□□□ -0.54
TTC39C-203ENST00000540918 NKTRP30414 1462 aaKnown RBP11.65□□□□□ -0.54
TTC39C-203ENST00000540918 NEK4P51957 841 aa11.65□□□□□ -0.54
TTC39C-203ENST00000540918 CCDC27Q2M243 656 aa11.65□□□□□ -0.54
TTC39C-203ENST00000540918 INTS3Q68E01 1043 aaKnown RBP11.65□□□□□ -0.54
TTC39C-203ENST00000540918 MEIS3Q99687 375 aa11.65□□□□□ -0.54
TTC39C-203ENST00000540918 ASXL1Q8IXJ9 1541 aa11.65□□□□□ -0.54
TTC39C-203ENST00000540918 CCT4P50991 539 aaKnown RBP11.65□□□□□ -0.54
TTC39C-203ENST00000540918 NFATC2IPQ8NCF5 419 aa11.65□□□□□ -0.54
TTC39C-203ENST00000540918 C19orf44Q9H6X5 657 aa11.65□□□□□ -0.54
TTC39C-203ENST00000540918 TBX22Q9Y458 520 aa11.65□□□□□ -0.54
TTC39C-203ENST00000540918 PLA2R1Q13018 1463 aa11.65□□□□□ -0.54
TTC39C-203ENST00000540918 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.55
TTC39C-203ENST00000540918 CDC45O75419 566 aa11.64□□□□□ -0.55
TTC39C-203ENST00000540918 AACSQ86V21 672 aa11.64□□□□□ -0.55
TTC39C-203ENST00000540918 LRRCC1Q9C099 1032 aa11.64□□□□□ -0.55
TTC39C-203ENST00000540918 UBAP1LF5GYI3 381 aa11.64□□□□□ -0.55
TTC39C-203ENST00000540918 LARP6Q9BRS8 491 aaKnown RBP11.64□□□□□ -0.55
TTC39C-203ENST00000540918 FKBP4Q02790 459 aaKnown RBP eCLIP11.64□□□□□ -0.55
TTC39C-203ENST00000540918 KIF6Q6ZMV9 814 aa11.64□□□□□ -0.55
TTC39C-203ENST00000540918 CNNM1Q9NRU3 951 aa11.64□□□□□ -0.55
TTC39C-203ENST00000540918 TMOD3Q9NYL9 352 aa11.64□□□□□ -0.55
TTC39C-203ENST00000540918 CHPF2Q9P2E5 772 aa11.64□□□□□ -0.55
TTC39C-203ENST00000540918 CWC27Q6UX04 472 aaKnown RBP11.63□□□□□ -0.55
TTC39C-203ENST00000540918 CCDC8Q9H0W5 538 aaPredicted RBP11.63□□□□□ -0.55
TTC39C-203ENST00000540918 VPS37CA5D8V6 355 aaPredicted RBP11.63□□□□□ -0.55
TTC39C-203ENST00000540918 ZKSCAN1P17029 563 aaPredicted RBP11.63□□□□□ -0.55
TTC39C-203ENST00000540918 MAST1Q9Y2H9 1570 aa11.63□□□□□ -0.55
TTC39C-203ENST00000540918 DDX49Q9Y6V7 483 aaKnown RBP11.62□□□□□ -0.55
TTC39C-203ENST00000540918 C16orf71Q8IYS4 520 aaPredicted RBP11.62□□□□□ -0.55
TTC39C-203ENST00000540918 LGR6Q9HBX8 967 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms