RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 NSD2O96028 1365 aa13.49□□□□□ -0.25
LMO3-224ENST00000540848 NGEFQ8N5V2 710 aa13.49□□□□□ -0.25
LMO3-224ENST00000540848 BCANQ96GW7 911 aa13.49□□□□□ -0.25
LMO3-224ENST00000540848 LARP6Q9BRS8 491 aaKnown RBP13.49□□□□□ -0.25
LMO3-224ENST00000540848 MFSD10Q14728 455 aa13.48□□□□□ -0.25
LMO3-224ENST00000540848 WDR43Q15061 677 aaKnown RBP eCLIP13.48□□□□□ -0.25
LMO3-224ENST00000540848 TBC1D12O60347 775 aa13.47□□□□□ -0.25
LMO3-224ENST00000540848 DLC1Q96QB1 1528 aa13.47□□□□□ -0.25
LMO3-224ENST00000540848 ALKQ9UM73 1620 aa13.47□□□□□ -0.25
LMO3-224ENST00000540848 A2ML1A8K2U0 1454 aa13.46□□□□□ -0.25
LMO3-224ENST00000540848 PSDA5PKW4 1024 aaPredicted RBP13.46□□□□□ -0.25
LMO3-224ENST00000540848 TMEM132EQ6IEE7 984 aa13.46□□□□□ -0.25
LMO3-224ENST00000540848 ESF1Q9H501 851 aaKnown RBP13.46□□□□□ -0.25
LMO3-224ENST00000540848 TULP4Q9NRJ4 1543 aa13.46□□□□□ -0.25
LMO3-224ENST00000540848 ANKRD36BQ8N2N9 1353 aa13.46□□□□□ -0.25
LMO3-224ENST00000540848 YTHDC2Q9H6S0 1430 aaKnown RBP13.46□□□□□ -0.26
LMO3-224ENST00000540848 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.45□□□□□ -0.26
LMO3-224ENST00000540848 ATAD2Q6PL18 1390 aa13.45□□□□□ -0.26
LMO3-224ENST00000540848 PTPRMP28827 1452 aa13.45□□□□□ -0.26
LMO3-224ENST00000540848 HDGFP51858 240 aaKnown RBP13.45□□□□□ -0.26
LMO3-224ENST00000540848 RTN4Q9NQC3 1192 aaKnown RBP13.45□□□□□ -0.26
LMO3-224ENST00000540848 POLR3AO14802 1390 aaPredicted RBP13.44□□□□□ -0.26
LMO3-224ENST00000540848 NSD3Q9BZ95 1437 aa13.44□□□□□ -0.26
LMO3-224ENST00000540848 ARHGAP33O14559 1287 aa13.44□□□□□ -0.26
LMO3-224ENST00000540848 PSEN2P49810 448 aa13.44□□□□□ -0.26
LMO3-224ENST00000540848 FBXO31Q5XUX0 539 aaPredicted RBP13.44□□□□□ -0.26
LMO3-224ENST00000540848 DDX27Q96GQ7 796 aaKnown RBP13.44□□□□□ -0.26
LMO3-224ENST00000540848 CARD14Q9BXL6 1004 aa13.44□□□□□ -0.26
LMO3-224ENST00000540848 CGNL1Q0VF96 1302 aa13.44□□□□□ -0.26
LMO3-224ENST00000540848 RIMS2Q9UQ26 1411 aa13.44□□□□□ -0.26
LMO3-224ENST00000540848 DMRTA1Q5VZB9 504 aa13.43□□□□□ -0.26
LMO3-224ENST00000540848 PTGER2P43116 358 aa13.42□□□□□ -0.26
LMO3-224ENST00000540848 ZMYM3Q14202 1370 aa13.41□□□□□ -0.26
LMO3-224ENST00000540848 EMILIN3Q9NT22 766 aa13.41□□□□□ -0.26
LMO3-224ENST00000540848 ADAMTS8Q9UP79 889 aa13.41□□□□□ -0.26
LMO3-224ENST00000540848 SETD1AO15047 1707 aaKnown RBP13.41□□□□□ -0.26
LMO3-224ENST00000540848 PPP4R3BQ5MIZ7 849 aa13.4□□□□□ -0.26
LMO3-224ENST00000540848 MORC1Q86VD1 984 aa13.4□□□□□ -0.26
LMO3-224ENST00000540848 BBXQ8WY36 941 aaPredicted RBP13.4□□□□□ -0.26
LMO3-224ENST00000540848 TSHZ2Q9NRE2 1034 aa13.4□□□□□ -0.26
LMO3-224ENST00000540848 MED14O60244 1454 aa13.39□□□□□ -0.27
LMO3-224ENST00000540848 ABCC11Q96J66 1382 aa13.39□□□□□ -0.27
LMO3-224ENST00000540848 NUTM2DQ5VT03 806 aaPredicted RBP13.39□□□□□ -0.27
LMO3-224ENST00000540848 RCAN3Q9UKA8 241 aa13.39□□□□□ -0.27
LMO3-224ENST00000540848 TNRQ92752 1358 aa13.38□□□□□ -0.27
LMO3-224ENST00000540848 ADGRD1Q6QNK2 874 aa13.38□□□□□ -0.27
LMO3-224ENST00000540848 SLC12A5Q9H2X9 1139 aa13.38□□□□□ -0.27
LMO3-224ENST00000540848 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
LMO3-224ENST00000540848 POGKQ9P215 609 aa13.38□□□□□ -0.27
LMO3-224ENST00000540848 KNDC1Q76NI1 1749 aa13.38□□□□□ -0.27
LMO3-224ENST00000540848 IRX6P78412 446 aaPredicted RBP13.37□□□□□ -0.27
LMO3-224ENST00000540848 SIRT1Q96EB6 747 aa13.37□□□□□ -0.27
LMO3-224ENST00000540848 TERF2IPQ9NYB0 399 aa13.37□□□□□ -0.27
LMO3-224ENST00000540848 NLRP1Q9C000 1473 aa13.37□□□□□ -0.27
LMO3-224ENST00000540848 ANKRD26Q9UPS8 1709 aa13.37□□□□□ -0.27
LMO3-224ENST00000540848 RRP1P56182 461 aaKnown RBP13.37□□□□□ -0.27
LMO3-224ENST00000540848 CFAP53Q96M91 514 aa13.37□□□□□ -0.27
LMO3-224ENST00000540848 ZNF521Q96K83 1311 aa13.36□□□□□ -0.27
LMO3-224ENST00000540848 PRAM1Q96QH2 718 aa13.36□□□□□ -0.27
LMO3-224ENST00000540848 NRXN3Q9Y4C0 1643 aa13.35□□□□□ -0.27
LMO3-224ENST00000540848 TECPR2O15040 1411 aa13.35□□□□□ -0.27
LMO3-224ENST00000540848 EVI5O60447 810 aa13.35□□□□□ -0.27
LMO3-224ENST00000540848 FOSBP53539 338 aa13.35□□□□□ -0.27
LMO3-224ENST00000540848 SRPK2P78362 688 aaKnown RBP13.35□□□□□ -0.27
LMO3-224ENST00000540848 MLECQ14165 292 aa13.35□□□□□ -0.27
LMO3-224ENST00000540848 FAM135BQ49AJ0 1406 aa13.35□□□□□ -0.27
LMO3-224ENST00000540848 ZNF454Q8N9F8 522 aa13.35□□□□□ -0.27
LMO3-224ENST00000540848 STK26Q9P289 416 aa13.35□□□□□ -0.27
LMO3-224ENST00000540848 UBR1Q8IWV7 1749 aa13.34□□□□□ -0.27
LMO3-224ENST00000540848 ATP7BP35670 1465 aa13.34□□□□□ -0.27
LMO3-224ENST00000540848 SHPRHQ149N8 1683 aa13.33□□□□□ -0.27
LMO3-224ENST00000540848 HRO43593 1189 aa13.33□□□□□ -0.28
LMO3-224ENST00000540848 A0A1W2PP64 1363 aa13.33□□□□□ -0.28
LMO3-224ENST00000540848 HDGFL2Q7Z4V5 671 aaPredicted RBP13.32□□□□□ -0.28
LMO3-224ENST00000540848 KCNK17Q96T54 332 aa13.32□□□□□ -0.28
LMO3-224ENST00000540848 TMEM2Q9UHN6 1383 aa13.32□□□□□ -0.28
LMO3-224ENST00000540848 CPS1P31327 1500 aa13.32□□□□□ -0.28
LMO3-224ENST00000540848 TK2O00142 265 aa13.32□□□□□ -0.28
LMO3-224ENST00000540848 PLEKHH1Q9ULM0 1364 aa13.32□□□□□ -0.28
LMO3-224ENST00000540848 SALL2Q9Y467 1007 aaPredicted RBP13.31□□□□□ -0.28
LMO3-224ENST00000540848 MINK1Q8N4C8 1332 aaPredicted RBP13.3□□□□□ -0.28
LMO3-224ENST00000540848 E9PSI1 815 aa13.3□□□□□ -0.28
LMO3-224ENST00000540848 CCDC136Q96JN2 1154 aa13.3□□□□□ -0.28
LMO3-224ENST00000540848 CD163L1Q9NR16 1453 aa13.3□□□□□ -0.28
LMO3-224ENST00000540848 DUSP27Q5VZP5 1158 aa13.29□□□□□ -0.28
LMO3-224ENST00000540848 TRMT2AQ8IZ69 625 aaKnown RBP13.29□□□□□ -0.28
LMO3-224ENST00000540848 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.29□□□□□ -0.28
LMO3-224ENST00000540848 CDCA7LQ96GN5 454 aa13.29□□□□□ -0.28
LMO3-224ENST00000540848 CDK19Q9BWU1 502 aa13.29□□□□□ -0.28
LMO3-224ENST00000540848 BCL2L12Q9HB09 334 aa13.29□□□□□ -0.28
LMO3-224ENST00000540848 KIF20BQ96Q89 1820 aa13.29□□□□□ -0.28
LMO3-224ENST00000540848 PLEKHG1Q9ULL1 1385 aa13.29□□□□□ -0.28
LMO3-224ENST00000540848 SLFN5Q08AF3 891 aa13.28□□□□□ -0.28
LMO3-224ENST00000540848 CAMK2BQ13554 666 aa13.28□□□□□ -0.28
LMO3-224ENST00000540848 SAFB2Q14151 953 aaKnown RBP eCLIP13.28□□□□□ -0.28
LMO3-224ENST00000540848 RUNDC1Q96C34 613 aa13.28□□□□□ -0.28
LMO3-224ENST00000540848 MAP3K9P80192 1104 aa13.28□□□□□ -0.28
LMO3-224ENST00000540848 B4GALNT3Q6L9W6 998 aa13.28□□□□□ -0.28
LMO3-224ENST00000540848 NKTRP30414 1462 aaKnown RBP13.27□□□□□ -0.28
LMO3-224ENST00000540848 APAF1O14727 1248 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms