RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 SETD1AO15047 1707 aaKnown RBP15.41■□□□□ 0.06
NPC1-202ENST00000540608 VAMP4O75379 141 aa15.41■□□□□ 0.06
NPC1-202ENST00000540608 MLECQ14165 292 aa15.41■□□□□ 0.06
NPC1-202ENST00000540608 DLC1Q96QB1 1528 aa15.4■□□□□ 0.06
NPC1-202ENST00000540608 SPATA31D1Q6ZQQ2 1576 aa15.4■□□□□ 0.06
NPC1-202ENST00000540608 CALD1Q05682 793 aaKnown RBP15.4■□□□□ 0.06
NPC1-202ENST00000540608 NFE2L2Q16236 605 aa15.4■□□□□ 0.06
NPC1-202ENST00000540608 MRPL50Q8N5N7 158 aaKnown RBP15.4■□□□□ 0.06
NPC1-202ENST00000540608 PIK3R4Q99570 1358 aa15.4■□□□□ 0.06
NPC1-202ENST00000540608 DDX11L8A8MPP1 907 aa15.4■□□□□ 0.06
NPC1-202ENST00000540608 GZF1Q9H116 711 aaPredicted RBP15.39■□□□□ 0.05
NPC1-202ENST00000540608 PPP6R1Q9UPN7 881 aa15.39■□□□□ 0.05
NPC1-202ENST00000540608 ATP7BP35670 1465 aa15.39■□□□□ 0.05
NPC1-202ENST00000540608 ANKRD45Q5TZF3 282 aa15.38■□□□□ 0.05
NPC1-202ENST00000540608 PHACTR3Q96KR7 559 aa15.38■□□□□ 0.05
NPC1-202ENST00000540608 PTCH1Q13635 1447 aa15.38■□□□□ 0.05
NPC1-202ENST00000540608 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
NPC1-202ENST00000540608 GNAI1P63096 354 aa15.37■□□□□ 0.05
NPC1-202ENST00000540608 RRAGDQ9NQL2 400 aaPredicted RBP15.37■□□□□ 0.05
NPC1-202ENST00000540608 IFT57Q9NWB7 429 aa15.37■□□□□ 0.05
NPC1-202ENST00000540608 CIZ1Q9ULV3 898 aaPredicted RBP15.37■□□□□ 0.05
NPC1-202ENST00000540608 ZNF853P0CG23 659 aa15.36■□□□□ 0.05
NPC1-202ENST00000540608 KIF2CQ99661 725 aa15.36■□□□□ 0.05
NPC1-202ENST00000540608 MRE11P49959 708 aa15.36■□□□□ 0.05
NPC1-202ENST00000540608 NRXN3Q9Y4C0 1643 aa15.35■□□□□ 0.05
NPC1-202ENST00000540608 MAP2P11137 1827 aaKnown RBP15.35■□□□□ 0.05
NPC1-202ENST00000540608 HMOX1P09601 288 aa15.35■□□□□ 0.05
NPC1-202ENST00000540608 TSPYL6Q8N831 410 aa15.35■□□□□ 0.05
NPC1-202ENST00000540608 METP08581 1390 aa15.35■□□□□ 0.05
NPC1-202ENST00000540608 ABCC4O15439 1325 aa15.35■□□□□ 0.05
NPC1-202ENST00000540608 HSP90AB1P08238 724 aaKnown RBP15.35■□□□□ 0.05
NPC1-202ENST00000540608 THUMPD2Q9BTF0 503 aaKnown RBP15.35■□□□□ 0.05
NPC1-202ENST00000540608 EMILIN1Q9Y6C2 1016 aa15.35■□□□□ 0.05
NPC1-202ENST00000540608 WASLO00401 505 aaPredicted RBP15.34■□□□□ 0.05
NPC1-202ENST00000540608 IL13P35225 146 aa15.34■□□□□ 0.05
NPC1-202ENST00000540608 NME9Q86XW9 330 aa15.34■□□□□ 0.05
NPC1-202ENST00000540608 SIRT2Q8IXJ6 389 aa15.34■□□□□ 0.05
NPC1-202ENST00000540608 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
NPC1-202ENST00000540608 ISY1Q9ULR0 285 aaKnown RBP15.34■□□□□ 0.05
NPC1-202ENST00000540608 CPSF1Q10570 1443 aaKnown RBP15.34■□□□□ 0.05
NPC1-202ENST00000540608 TNPO1Q92973 898 aaKnown RBP15.34■□□□□ 0.05
NPC1-202ENST00000540608 ARXQ96QS3 562 aa15.34■□□□□ 0.05
NPC1-202ENST00000540608 C1orf115Q9H7X2 142 aa15.34■□□□□ 0.05
NPC1-202ENST00000540608 MBIPQ9NS73 344 aa15.34■□□□□ 0.05
NPC1-202ENST00000540608 NCKAP5LQ9HCH0 1330 aa15.33■□□□□ 0.05
NPC1-202ENST00000540608 TXNDC2Q86VQ3 553 aa15.33■□□□□ 0.04
NPC1-202ENST00000540608 PANK2Q9BZ23 570 aa15.33■□□□□ 0.04
NPC1-202ENST00000540608 RAB3GAP1Q15042 981 aa15.33■□□□□ 0.04
NPC1-202ENST00000540608 TBC1D9Q6ZT07 1266 aa15.33■□□□□ 0.04
NPC1-202ENST00000540608 EDC4Q6P2E9 1401 aaKnown RBP15.32■□□□□ 0.04
NPC1-202ENST00000540608 TWISTNBQ3B726 338 aaPredicted RBP15.32■□□□□ 0.04
NPC1-202ENST00000540608 GBP4Q96PP9 640 aa15.32■□□□□ 0.04
NPC1-202ENST00000540608 LMOD3Q0VAK6 560 aa15.31■□□□□ 0.04
NPC1-202ENST00000540608 CFAP44Q96MT7 982 aa15.31■□□□□ 0.04
NPC1-202ENST00000540608 API5Q9BZZ5 524 aaKnown RBP15.31■□□□□ 0.04
NPC1-202ENST00000540608 ELL2O00472 640 aaPredicted RBP15.31■□□□□ 0.04
NPC1-202ENST00000540608 EIF5BO60841 1220 aaKnown RBP15.3■□□□□ 0.04
NPC1-202ENST00000540608 PTMSP20962 102 aa15.3■□□□□ 0.04
NPC1-202ENST00000540608 GRPEL1Q9HAV7 217 aa15.3■□□□□ 0.04
NPC1-202ENST00000540608 SKOR2Q2VWA4 1001 aaPredicted RBP15.3■□□□□ 0.04
NPC1-202ENST00000540608 KIF24Q5T7B8 1368 aa15.3■□□□□ 0.04
NPC1-202ENST00000540608 AATKQ6ZMQ8 1374 aa15.3■□□□□ 0.04
NPC1-202ENST00000540608 CDK12Q9NYV4 1490 aaPredicted RBP15.3■□□□□ 0.04
NPC1-202ENST00000540608 K7ELQ4 463 aaPredicted RBP15.3■□□□□ 0.04
NPC1-202ENST00000540608 C8orf58Q8NAV2 365 aa15.3■□□□□ 0.04
NPC1-202ENST00000540608 NUDT16Q96DE0 195 aaKnown RBP15.3■□□□□ 0.04
NPC1-202ENST00000540608 CPS1P31327 1500 aa15.29■□□□□ 0.04
NPC1-202ENST00000540608 CDC45O75419 566 aa15.29■□□□□ 0.04
NPC1-202ENST00000540608 CD2BP2O95400 341 aaKnown RBP15.29■□□□□ 0.04
NPC1-202ENST00000540608 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.29■□□□□ 0.04
NPC1-202ENST00000540608 HSP90AA1P07900 732 aaKnown RBP15.28■□□□□ 0.04
NPC1-202ENST00000540608 RRS1Q15050 365 aaKnown RBP15.28■□□□□ 0.04
NPC1-202ENST00000540608 PRKCSHP14314 528 aaPredicted RBP15.27■□□□□ 0.04
NPC1-202ENST00000540608 CLCN1P35523 988 aa15.27■□□□□ 0.03
NPC1-202ENST00000540608 DCTPP1Q9H773 170 aa15.27■□□□□ 0.03
NPC1-202ENST00000540608 CCDC61Q9Y6R9 512 aa15.27■□□□□ 0.03
NPC1-202ENST00000540608 PLEKHM2Q8IWE5 1019 aa15.26■□□□□ 0.03
NPC1-202ENST00000540608 COG3Q96JB2 828 aa15.26■□□□□ 0.03
NPC1-202ENST00000540608 RBM42Q9BTD8 480 aaKnown RBP15.26■□□□□ 0.03
NPC1-202ENST00000540608 DLG5Q8TDM6 1919 aa15.26■□□□□ 0.03
NPC1-202ENST00000540608 MON2Q7Z3U7 1717 aa15.26■□□□□ 0.03
NPC1-202ENST00000540608 GSPT1P15170 499 aaKnown RBP15.25■□□□□ 0.03
NPC1-202ENST00000540608 ESF1Q9H501 851 aaKnown RBP15.25■□□□□ 0.03
NPC1-202ENST00000540608 KNDC1Q76NI1 1749 aa15.25■□□□□ 0.03
NPC1-202ENST00000540608 CLEC17AQ6ZS10 378 aa15.25■□□□□ 0.03
NPC1-202ENST00000540608 PRR36Q9H6K5 1346 aa15.25■□□□□ 0.03
NPC1-202ENST00000540608 TECPR2O15040 1411 aa15.25■□□□□ 0.03
NPC1-202ENST00000540608 INTS3Q68E01 1043 aaKnown RBP15.24■□□□□ 0.03
NPC1-202ENST00000540608 FAM83GA6ND36 823 aa15.24■□□□□ 0.03
NPC1-202ENST00000540608 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
NPC1-202ENST00000540608 GAS2L2Q8NHY3 880 aa15.24■□□□□ 0.03
NPC1-202ENST00000540608 C3P01024 1663 aa15.23■□□□□ 0.03
NPC1-202ENST00000540608 SIRT1Q96EB6 747 aa15.23■□□□□ 0.03
NPC1-202ENST00000540608 AKAP12Q02952 1782 aa15.23■□□□□ 0.03
NPC1-202ENST00000540608 TTC22Q5TAA0 569 aa15.23■□□□□ 0.03
NPC1-202ENST00000540608 GAS2L3Q86XJ1 694 aa15.23■□□□□ 0.03
NPC1-202ENST00000540608 RABEP1Q15276 862 aa15.22■□□□□ 0.03
NPC1-202ENST00000540608 ROBO2Q9HCK4 1378 aa15.22■□□□□ 0.03
NPC1-202ENST00000540608 HAP1P54257 671 aaPredicted RBP15.22■□□□□ 0.03
NPC1-202ENST00000540608 DCTN1Q14203 1278 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms