RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 GLI3P10071 1580 aa16.26■□□□□ 0.19
DDX55-206ENST00000539934 BLMP54132 1417 aaPredicted RBP16.26■□□□□ 0.19
DDX55-206ENST00000539934 BRWD3Q6RI45 1802 aa16.26■□□□□ 0.19
DDX55-206ENST00000539934 SF3B2Q13435 895 aaKnown RBP16.26■□□□□ 0.19
DDX55-206ENST00000539934 COL22A1Q8NFW1 1626 aaPredicted RBP16.25■□□□□ 0.19
DDX55-206ENST00000539934 CFAP70Q5T0N1 1121 aa16.25■□□□□ 0.19
DDX55-206ENST00000539934 FAM182BQ5T319 152 aa16.25■□□□□ 0.19
DDX55-206ENST00000539934 EIF3AQ14152 1382 aaKnown RBP16.25■□□□□ 0.19
DDX55-206ENST00000539934 NRXN1Q9ULB1 1477 aa16.25■□□□□ 0.19
DDX55-206ENST00000539934 TMEM132EQ6IEE7 984 aa16.25■□□□□ 0.19
DDX55-206ENST00000539934 LMOD2Q6P5Q4 547 aa16.25■□□□□ 0.19
DDX55-206ENST00000539934 ANP32BQ92688 251 aaKnown RBP16.25■□□□□ 0.19
DDX55-206ENST00000539934 PLCD3Q8N3E9 789 aa16.24■□□□□ 0.19
DDX55-206ENST00000539934 ZNF622Q969S3 477 aaKnown RBP eCLIP16.24■□□□□ 0.191e-9■■□□□ 11.9
DDX55-206ENST00000539934 RPGRIP1LQ68CZ1 1315 aa16.24■□□□□ 0.19
DDX55-206ENST00000539934 MARF1Q9Y4F3 1742 aaKnown RBP16.23■□□□□ 0.19
DDX55-206ENST00000539934 IRX3P78415 501 aaPredicted RBP16.22■□□□□ 0.19
DDX55-206ENST00000539934 PLEKHH1Q9ULM0 1364 aa16.22■□□□□ 0.19
DDX55-206ENST00000539934 PTMSP20962 102 aa16.22■□□□□ 0.19
DDX55-206ENST00000539934 SMAP1Q8IYB5 467 aaPredicted RBP16.22■□□□□ 0.19
DDX55-206ENST00000539934 PSMD1Q99460 953 aa16.22■□□□□ 0.19
DDX55-206ENST00000539934 MRS2Q9HD23 443 aa16.21■□□□□ 0.19
DDX55-206ENST00000539934 PIK3C2GO75747 1445 aa16.2■□□□□ 0.18
DDX55-206ENST00000539934 KRT28Q7Z3Y7 464 aa16.2■□□□□ 0.18
DDX55-206ENST00000539934 SLIT2O94813 1529 aa16.2■□□□□ 0.18
DDX55-206ENST00000539934 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
DDX55-206ENST00000539934 CCDC184Q52MB2 194 aa16.19■□□□□ 0.18
DDX55-206ENST00000539934 AXDND1Q5T1B0 1012 aaPredicted RBP16.19■□□□□ 0.18
DDX55-206ENST00000539934 FAM43BQ6ZT52 329 aaPredicted RBP16.19■□□□□ 0.18
DDX55-206ENST00000539934 KRT27Q7Z3Y8 459 aa16.19■□□□□ 0.18
DDX55-206ENST00000539934 EN1Q05925 392 aaPredicted RBP16.18■□□□□ 0.18
DDX55-206ENST00000539934 SAFB2Q14151 953 aaKnown RBP eCLIP16.18■□□□□ 0.18
DDX55-206ENST00000539934 SETQ01105 290 aaPredicted RBP16.18■□□□□ 0.18
DDX55-206ENST00000539934 GSE1Q14687 1217 aa16.18■□□□□ 0.18
DDX55-206ENST00000539934 FAM98CQ17RN3 349 aaKnown RBP16.18■□□□□ 0.18
DDX55-206ENST00000539934 PHF14O94880 888 aa16.17■□□□□ 0.18
DDX55-206ENST00000539934 CDCA8Q53HL2 280 aa16.17■□□□□ 0.18
DDX55-206ENST00000539934 UTP14CQ5TAP6 766 aaKnown RBP16.17■□□□□ 0.18
DDX55-206ENST00000539934 R3HDM1Q15032 1099 aaKnown RBP16.17■□□□□ 0.18
DDX55-206ENST00000539934 CDC42BPGQ6DT37 1551 aa16.16■□□□□ 0.18
DDX55-206ENST00000539934 C14orf93Q9H972 538 aaKnown RBP16.16■□□□□ 0.18
DDX55-206ENST00000539934 LRPPRCP42704 1394 aaKnown RBP16.15■□□□□ 0.18
DDX55-206ENST00000539934 HNRNPUQ00839 825 aaKnown RBP eCLIP16.15■□□□□ 0.18
DDX55-206ENST00000539934 VPS72Q15906 364 aa16.15■□□□□ 0.18
DDX55-206ENST00000539934 FAM9BQ8IZU0 186 aa16.15■□□□□ 0.18
DDX55-206ENST00000539934 USP32Q8NFA0 1604 aa16.15■□□□□ 0.18
DDX55-206ENST00000539934 KTN1Q86UP2 1357 aaKnown RBP16.14■□□□□ 0.17
DDX55-206ENST00000539934 FAM83GA6ND36 823 aa16.14■□□□□ 0.17
DDX55-206ENST00000539934 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.14■□□□□ 0.17
DDX55-206ENST00000539934 PMFBP1Q8TBY8 1022 aa16.14■□□□□ 0.17
DDX55-206ENST00000539934 IPO9Q96P70 1041 aaKnown RBP16.14■□□□□ 0.17
DDX55-206ENST00000539934 HDAC5Q9UQL6 1122 aa16.14■□□□□ 0.17
DDX55-206ENST00000539934 RGPD8O14715 1765 aaPredicted RBP16.13■□□□□ 0.17
DDX55-206ENST00000539934 PATL2C9JE40 543 aaKnown RBP16.13■□□□□ 0.17
DDX55-206ENST00000539934 BAG6P46379 1132 aa16.13■□□□□ 0.17
DDX55-206ENST00000539934 PANK3Q9H999 370 aa16.13■□□□□ 0.17
DDX55-206ENST00000539934 RALBP1Q15311 655 aa16.13■□□□□ 0.17
DDX55-206ENST00000539934 ADGRB1O14514 1584 aa16.12■□□□□ 0.17
DDX55-206ENST00000539934 TRAK1Q9UPV9 953 aa16.11■□□□□ 0.17
DDX55-206ENST00000539934 PER1O15534 1290 aaPredicted RBP16.11■□□□□ 0.17
DDX55-206ENST00000539934 BTG4Q9NY30 223 aa16.11■□□□□ 0.17
DDX55-206ENST00000539934 PHF8Q9UPP1 1060 aa16.11■□□□□ 0.17
DDX55-206ENST00000539934 PSME1Q06323 249 aa16.1■□□□□ 0.17
DDX55-206ENST00000539934 QRICH2Q9H0J4 1663 aa16.1■□□□□ 0.17
DDX55-206ENST00000539934 ONECUT3O60422 494 aaPredicted RBP16.1■□□□□ 0.17
DDX55-206ENST00000539934 LRP5O75197 1615 aa16.1■□□□□ 0.17
DDX55-206ENST00000539934 MYBBP1AQ9BQG0 1328 aaKnown RBP16.1■□□□□ 0.17
DDX55-206ENST00000539934 PLCH1Q4KWH8 1693 aa16.1■□□□□ 0.17
DDX55-206ENST00000539934 MYOM1P52179 1685 aa16.09■□□□□ 0.17
DDX55-206ENST00000539934 PSEN1P49768 467 aa16.09■□□□□ 0.17
DDX55-206ENST00000539934 EZH2Q15910 746 aaKnown RBP16.09■□□□□ 0.17
DDX55-206ENST00000539934 TMC1Q8TDI8 760 aa16.09■□□□□ 0.17
DDX55-206ENST00000539934 SBNO2Q9Y2G9 1366 aa16.08■□□□□ 0.17
DDX55-206ENST00000539934 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.17
DDX55-206ENST00000539934 ZBTB47Q9UFB7 747 aaPredicted RBP16.08■□□□□ 0.16
DDX55-206ENST00000539934 GOLGB1Q14789 3259 aaKnown RBP16.08■□□□□ 0.16
DDX55-206ENST00000539934 PARD3Q8TEW0 1356 aa16.07■□□□□ 0.16
DDX55-206ENST00000539934 DDRGK1Q96HY6 314 aa16.07■□□□□ 0.16
DDX55-206ENST00000539934 ARHGEF28Q8N1W1 1705 aaKnown RBP16.07■□□□□ 0.16
DDX55-206ENST00000539934 FMN2Q9NZ56 1722 aa16.07■□□□□ 0.16
DDX55-206ENST00000539934 CC2D1BQ5T0F9 858 aaKnown RBP16.06■□□□□ 0.16
DDX55-206ENST00000539934 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
DDX55-206ENST00000539934 CC2D2BQ6DHV5 1058 aa16.06■□□□□ 0.16
DDX55-206ENST00000539934 BRD4O60885 1362 aaPredicted RBP16.05■□□□□ 0.16
DDX55-206ENST00000539934 TPM2P07951 284 aa16.05■□□□□ 0.16
DDX55-206ENST00000539934 CERS3Q8IU89 383 aa16.05■□□□□ 0.16
DDX55-206ENST00000539934 PRDM16Q9HAZ2 1276 aa16.05■□□□□ 0.16
DDX55-206ENST00000539934 ABCC11Q96J66 1382 aa16.05■□□□□ 0.16
DDX55-206ENST00000539934 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
DDX55-206ENST00000539934 YTHDC2Q9H6S0 1430 aaKnown RBP16.04■□□□□ 0.16
DDX55-206ENST00000539934 TRIM37O94972 964 aa16.04■□□□□ 0.16
DDX55-206ENST00000539934 PRAM1Q96QH2 718 aa16.04■□□□□ 0.16
DDX55-206ENST00000539934 TECPR2O15040 1411 aa16.04■□□□□ 0.16
DDX55-206ENST00000539934 MAP7D2Q96T17 732 aa16.03■□□□□ 0.16
DDX55-206ENST00000539934 VGLL3A8MV65 326 aa16.03■□□□□ 0.16
DDX55-206ENST00000539934 ANP32AP39687 249 aaKnown RBP16.03■□□□□ 0.16
DDX55-206ENST00000539934 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
DDX55-206ENST00000539934 NLRP13Q86W25 1043 aa16.03■□□□□ 0.16
DDX55-206ENST00000539934 RRAGDQ9NQL2 400 aaPredicted RBP16.03■□□□□ 0.16
DDX55-206ENST00000539934 CLCN1P35523 988 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms