RNA–Protein interactions for RNA: ENST00000539063.5

PHC1-206, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-206ENST00000539063 IQSEC2Q5JU85 1478 aa12.59□□□□□ -0.39
PHC1-206ENST00000539063 GCP02774 474 aa12.59□□□□□ -0.39
PHC1-206ENST00000539063 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
PHC1-206ENST00000539063 CALD1Q05682 793 aaKnown RBP12.59□□□□□ -0.39
PHC1-206ENST00000539063 WDR63Q8IWG1 891 aa12.59□□□□□ -0.39
PHC1-206ENST00000539063 IP6K1Q92551 441 aa12.59□□□□□ -0.39
PHC1-206ENST00000539063 SUPT16HQ9Y5B9 1047 aaKnown RBP12.59□□□□□ -0.39
PHC1-206ENST00000539063 TMPOP42166 694 aaKnown RBP12.58□□□□□ -0.4
PHC1-206ENST00000539063 RIPK4P57078 832 aa12.58□□□□□ -0.4
PHC1-206ENST00000539063 SULT6B1Q6IMI4 303 aa12.58□□□□□ -0.4
PHC1-206ENST00000539063 WWC1Q8IX03 1113 aa12.58□□□□□ -0.4
PHC1-206ENST00000539063 LTV1Q96GA3 475 aaPredicted RBP12.58□□□□□ -0.4
PHC1-206ENST00000539063 PLEKHF1Q96S99 279 aa12.58□□□□□ -0.4
PHC1-206ENST00000539063 MYH16Q9H6N6 1097 aa12.58□□□□□ -0.4
PHC1-206ENST00000539063 SPATA31A3Q5VYP0 1347 aa12.58□□□□□ -0.4
PHC1-206ENST00000539063 ZNF521Q96K83 1311 aa12.58□□□□□ -0.4
PHC1-206ENST00000539063 SLIT3O75094 1523 aa12.57□□□□□ -0.4
PHC1-206ENST00000539063 TRPM3Q9HCF6 1732 aaPredicted RBP12.57□□□□□ -0.4
PHC1-206ENST00000539063 NFE2L2Q16236 605 aa12.57□□□□□ -0.4
PHC1-206ENST00000539063 DDX17Q92841 729 aaKnown RBP12.57□□□□□ -0.4
PHC1-206ENST00000539063 CDCA7LQ96GN5 454 aa12.57□□□□□ -0.4
PHC1-206ENST00000539063 XIRP1Q702N8 1843 aaKnown RBP12.57□□□□□ -0.4
PHC1-206ENST00000539063 NFAT5O94916 1531 aa12.57□□□□□ -0.4
PHC1-206ENST00000539063 SLFN5Q08AF3 891 aa12.56□□□□□ -0.4
PHC1-206ENST00000539063 FKBP8Q14318 412 aa12.56□□□□□ -0.4
PHC1-206ENST00000539063 RCAN3Q9UKA8 241 aa12.56□□□□□ -0.4
PHC1-206ENST00000539063 PXDNQ92626 1479 aa12.56□□□□□ -0.4
PHC1-206ENST00000539063 PEAK1Q9H792 1746 aa12.55□□□□□ -0.4
PHC1-206ENST00000539063 ARHGEF25Q86VW2 580 aa12.55□□□□□ -0.4
PHC1-206ENST00000539063 SOS2Q07890 1332 aaPredicted RBP12.54□□□□□ -0.4
PHC1-206ENST00000539063 IL16Q14005 1332 aa12.54□□□□□ -0.4
PHC1-206ENST00000539063 IGSF1Q8N6C5 1336 aa12.54□□□□□ -0.4
PHC1-206ENST00000539063 ZC3H6P61129 1189 aaKnown RBP12.53□□□□□ -0.4
PHC1-206ENST00000539063 DUSP27Q5VZP5 1158 aa12.53□□□□□ -0.4
PHC1-206ENST00000539063 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.53□□□□□ -0.4
PHC1-206ENST00000539063 GAS2L2Q8NHY3 880 aa12.53□□□□□ -0.4
PHC1-206ENST00000539063 EYA1Q99502 592 aa12.53□□□□□ -0.4
PHC1-206ENST00000539063 ALS2Q96Q42 1657 aa12.53□□□□□ -0.4
PHC1-206ENST00000539063 MARF1Q9Y4F3 1742 aaKnown RBP12.52□□□□□ -0.41
PHC1-206ENST00000539063 TOM1O60784 492 aa12.52□□□□□ -0.41
PHC1-206ENST00000539063 ERICH6BQ5W0A0 696 aa12.52□□□□□ -0.41
PHC1-206ENST00000539063 AEBP1Q8IUX7 1158 aa12.52□□□□□ -0.41
PHC1-206ENST00000539063 LTBP4Q8N2S1 1624 aa12.51□□□□□ -0.41
PHC1-206ENST00000539063 CSB-PGBD3P0DP91 1061 aa12.51□□□□□ -0.41
PHC1-206ENST00000539063 ANKRD24Q8TF21 1146 aa12.51□□□□□ -0.41
PHC1-206ENST00000539063 RTF1Q92541 710 aaKnown RBP12.51□□□□□ -0.41
PHC1-206ENST00000539063 PHACTR3Q96KR7 559 aa12.51□□□□□ -0.41
PHC1-206ENST00000539063 MED1Q15648 1581 aaPredicted RBP12.51□□□□□ -0.41
PHC1-206ENST00000539063 LRRC59Q96AG4 307 aaKnown RBP12.5□□□□□ -0.41
PHC1-206ENST00000539063 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
PHC1-206ENST00000539063 KDRP35968 1356 aa12.5□□□□□ -0.41
PHC1-206ENST00000539063 LTN1O94822 1766 aa12.49□□□□□ -0.41
PHC1-206ENST00000539063 RRP1P56182 461 aaKnown RBP12.49□□□□□ -0.41
PHC1-206ENST00000539063 GNAI1P63096 354 aa12.49□□□□□ -0.41
PHC1-206ENST00000539063 TRMT2AQ8IZ69 625 aaKnown RBP12.49□□□□□ -0.41
PHC1-206ENST00000539063 CABLES1Q8TDN4 633 aa12.49□□□□□ -0.41
PHC1-206ENST00000539063 PRDM11Q9NQV5 511 aa12.49□□□□□ -0.41
PHC1-206ENST00000539063 PHRF1Q9P1Y6 1649 aaKnown RBP12.48□□□□□ -0.41
PHC1-206ENST00000539063 ABCC6O95255 1503 aa12.48□□□□□ -0.41
PHC1-206ENST00000539063 CPDO75976 1380 aa12.48□□□□□ -0.41
PHC1-206ENST00000539063 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
PHC1-206ENST00000539063 LAS1LQ9Y4W2 734 aaKnown RBP12.48□□□□□ -0.41
PHC1-206ENST00000539063 NHSL1Q5SYE7 1610 aa12.48□□□□□ -0.41
PHC1-206ENST00000539063 CANXP27824 592 aaKnown RBP12.47□□□□□ -0.41
PHC1-206ENST00000539063 IRX6P78412 446 aaPredicted RBP12.47□□□□□ -0.41
PHC1-206ENST00000539063 PLEKHO1Q53GL0 409 aaPredicted RBP12.47□□□□□ -0.41
PHC1-206ENST00000539063 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
PHC1-206ENST00000539063 USHBP1Q8N6Y0 703 aa12.47□□□□□ -0.41
PHC1-206ENST00000539063 IFT57Q9NWB7 429 aa12.47□□□□□ -0.41
PHC1-206ENST00000539063 NLRP2Q9NX02 1062 aa12.47□□□□□ -0.41
PHC1-206ENST00000539063 RGPD1P0DJD0 1748 aa12.47□□□□□ -0.41
PHC1-206ENST00000539063 KIAA0232Q92628 1395 aa12.46□□□□□ -0.41
PHC1-206ENST00000539063 RNF123Q5XPI4 1314 aa12.46□□□□□ -0.41
PHC1-206ENST00000539063 FANCIQ9NVI1 1328 aa12.46□□□□□ -0.41
PHC1-206ENST00000539063 UBAP1LF5GYI3 381 aa12.46□□□□□ -0.41
PHC1-206ENST00000539063 HTATSF1O43719 755 aaKnown RBP12.46□□□□□ -0.41
PHC1-206ENST00000539063 AMOTQ4VCS5 1084 aa12.46□□□□□ -0.41
PHC1-206ENST00000539063 NBPF6Q5VWK0 638 aa12.46□□□□□ -0.41
PHC1-206ENST00000539063 NBPF4Q96M43 638 aa12.46□□□□□ -0.41
PHC1-206ENST00000539063 SPINK5Q9NQ38 1064 aaPredicted RBP12.46□□□□□ -0.41
PHC1-206ENST00000539063 AHDC1Q5TGY3 1603 aaPredicted RBP12.45□□□□□ -0.42
PHC1-206ENST00000539063 ERBB3P21860 1342 aa12.45□□□□□ -0.42
PHC1-206ENST00000539063 PIP4K2BP78356 416 aa12.45□□□□□ -0.42
PHC1-206ENST00000539063 CHRNA2Q15822 529 aa12.45□□□□□ -0.42
PHC1-206ENST00000539063 RAPGEF4Q8WZA2 1011 aa12.45□□□□□ -0.42
PHC1-206ENST00000539063 ROBO1Q9Y6N7 1651 aa12.45□□□□□ -0.42
PHC1-206ENST00000539063 GNAT3A8MTJ3 354 aa12.44□□□□□ -0.42
PHC1-206ENST00000539063 MTHFSDQ2M296 383 aaKnown RBP12.44□□□□□ -0.42
PHC1-206ENST00000539063 C1orf141Q5JVX7 400 aa12.44□□□□□ -0.42
PHC1-206ENST00000539063 TSR2Q969E8 191 aaKnown RBP12.44□□□□□ -0.42
PHC1-206ENST00000539063 MAP3K5Q99683 1374 aa12.43□□□□□ -0.42
PHC1-206ENST00000539063 TATP17735 454 aaPredicted RBP12.43□□□□□ -0.42
PHC1-206ENST00000539063 EVA1CP58658 441 aa12.43□□□□□ -0.42
PHC1-206ENST00000539063 ZNF530Q6P9A1 599 aaPredicted RBP12.43□□□□□ -0.42
PHC1-206ENST00000539063 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
PHC1-206ENST00000539063 AXIN2Q9Y2T1 843 aa12.43□□□□□ -0.42
PHC1-206ENST00000539063 EXOSC9Q06265 439 aaKnown RBP12.42□□□□□ -0.42
PHC1-206ENST00000539063 THUMPD2Q9BTF0 503 aaKnown RBP12.42□□□□□ -0.42
PHC1-206ENST00000539063 PPP4R2Q9NY27 417 aa12.42□□□□□ -0.42
PHC1-206ENST00000539063 FAM83GA6ND36 823 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms