RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 CHD1LQ86WJ1 897 aa15.07■□□□□ 0
CPNE8-203ENST00000538596 SETD1AO15047 1707 aaKnown RBP15.07■□□□□ 0
CPNE8-203ENST00000538596 NUDT16Q96DE0 195 aaKnown RBP15.07■□□□□ 0
CPNE8-203ENST00000538596 C8orf58Q8NAV2 365 aa15.07■□□□□ 0
CPNE8-203ENST00000538596 CPSF1Q10570 1443 aaKnown RBP15.06■□□□□ 0
CPNE8-203ENST00000538596 ANKRD45Q5TZF3 282 aa15.06■□□□□ 0
CPNE8-203ENST00000538596 DLC1Q96QB1 1528 aa15.06■□□□□ 0
CPNE8-203ENST00000538596 CPS1P31327 1500 aa15.05■□□□□ 0
CPNE8-203ENST00000538596 TWISTNBQ3B726 338 aaPredicted RBP15.05■□□□□ -0
CPNE8-203ENST00000538596 SIRT2Q8IXJ6 389 aa15.05■□□□□ -0
CPNE8-203ENST00000538596 EDC4Q6P2E9 1401 aaKnown RBP15.05■□□□□ -0
CPNE8-203ENST00000538596 ZNF853P0CG23 659 aa15.04■□□□□ -0
CPNE8-203ENST00000538596 GNAI1P63096 354 aa15.04■□□□□ -0
CPNE8-203ENST00000538596 COG3Q96JB2 828 aa15.04■□□□□ -0
CPNE8-203ENST00000538596 IFT57Q9NWB7 429 aa15.04■□□□□ -0
CPNE8-203ENST00000538596 NUTM2FA1L443 756 aa15.04■□□□□ -0
CPNE8-203ENST00000538596 ARXQ96QS3 562 aa15.04■□□□□ -0
CPNE8-203ENST00000538596 NRXN3Q9Y4C0 1643 aa15.04■□□□□ -0
CPNE8-203ENST00000538596 BRPF1P55201 1214 aaPredicted RBP15.03■□□□□ -0
CPNE8-203ENST00000538596 SPATA31D1Q6ZQQ2 1576 aa15.03■□□□□ -0
CPNE8-203ENST00000538596 AEBP1Q8IUX7 1158 aa15.03■□□□□ -0
CPNE8-203ENST00000538596 DLG5Q8TDM6 1919 aa15.02■□□□□ -0
CPNE8-203ENST00000538596 KRT24Q2M2I5 525 aa15.02■□□□□ -0
CPNE8-203ENST00000538596 CCDC61Q9Y6R9 512 aa15.02■□□□□ -0
CPNE8-203ENST00000538596 PRR36Q9H6K5 1346 aa15.02□□□□□ -0.01
CPNE8-203ENST00000538596 ZNF428Q96B54 188 aa15.02□□□□□ -0.01
CPNE8-203ENST00000538596 ESF1Q9H501 851 aaKnown RBP15.02□□□□□ -0.01
CPNE8-203ENST00000538596 CDK12Q9NYV4 1490 aaPredicted RBP15.02□□□□□ -0.01
CPNE8-203ENST00000538596 CALD1Q05682 793 aaKnown RBP15.01□□□□□ -0.01
CPNE8-203ENST00000538596 CFAP44Q96MT7 982 aa15.01□□□□□ -0.01
CPNE8-203ENST00000538596 PTCH1Q13635 1447 aa15.01□□□□□ -0.01
CPNE8-203ENST00000538596 ARHGAP45Q92619 1136 aa15.01□□□□□ -0.01
CPNE8-203ENST00000538596 AGLP35573 1532 aa15.01□□□□□ -0.01
CPNE8-203ENST00000538596 ABCC4O15439 1325 aa15□□□□□ -0.01
CPNE8-203ENST00000538596 GZF1Q9H116 711 aaPredicted RBP15□□□□□ -0.01
CPNE8-203ENST00000538596 HSCBQ8IWL3 235 aa15□□□□□ -0.01
CPNE8-203ENST00000538596 REREQ9P2R6 1566 aa15□□□□□ -0.01
CPNE8-203ENST00000538596 SOX12O15370 315 aa14.99□□□□□ -0.01
CPNE8-203ENST00000538596 MCM4P33991 863 aa14.99□□□□□ -0.01
CPNE8-203ENST00000538596 ANO8Q9HCE9 1232 aaPredicted RBP14.99□□□□□ -0.01
CPNE8-203ENST00000538596 PPP6R1Q9UPN7 881 aa14.99□□□□□ -0.01
CPNE8-203ENST00000538596 PIK3R4Q99570 1358 aa14.99□□□□□ -0.01
CPNE8-203ENST00000538596 BMP2KLQ5H9B9 411 aa14.99□□□□□ -0.01
CPNE8-203ENST00000538596 AATKQ6ZMQ8 1374 aa14.99□□□□□ -0.01
CPNE8-203ENST00000538596 SULT6B1Q6IMI4 303 aa14.99□□□□□ -0.01
CPNE8-203ENST00000538596 GCC1Q96CN9 775 aa14.99□□□□□ -0.01
CPNE8-203ENST00000538596 CEBPAP49715 358 aaPredicted RBP14.98□□□□□ -0.01
CPNE8-203ENST00000538596 RBM25P49756 843 aaKnown RBP14.98□□□□□ -0.01
CPNE8-203ENST00000538596 CHMP5Q9NZZ3 219 aa14.98□□□□□ -0.01
CPNE8-203ENST00000538596 MCM10Q7L590 875 aa14.98□□□□□ -0.01
CPNE8-203ENST00000538596 EIF4A2Q14240 407 aaKnown RBP14.97□□□□□ -0.01
CPNE8-203ENST00000538596 TBC1D9Q6ZT07 1266 aa14.97□□□□□ -0.01
CPNE8-203ENST00000538596 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
CPNE8-203ENST00000538596 CD2BP2O95400 341 aaKnown RBP14.97□□□□□ -0.01
CPNE8-203ENST00000538596 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.97□□□□□ -0.01
CPNE8-203ENST00000538596 KIF2CQ99661 725 aa14.97□□□□□ -0.01
CPNE8-203ENST00000538596 RBM42Q9BTD8 480 aaKnown RBP14.96□□□□□ -0.01
CPNE8-203ENST00000538596 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
CPNE8-203ENST00000538596 ROBO2Q9HCK4 1378 aa14.96□□□□□ -0.01
CPNE8-203ENST00000538596 LMOD3Q0VAK6 560 aa14.96□□□□□ -0.01
CPNE8-203ENST00000538596 MON2Q7Z3U7 1717 aa14.95□□□□□ -0.02
CPNE8-203ENST00000538596 HSP90AB2PQ58FF8 381 aa14.95□□□□□ -0.02
CPNE8-203ENST00000538596 API5Q9BZZ5 524 aaKnown RBP14.95□□□□□ -0.02
CPNE8-203ENST00000538596 C3P01024 1663 aa14.94□□□□□ -0.02
CPNE8-203ENST00000538596 C16orf71Q8IYS4 520 aaPredicted RBP14.94□□□□□ -0.02
CPNE8-203ENST00000538596 KNDC1Q76NI1 1749 aa14.94□□□□□ -0.02
CPNE8-203ENST00000538596 CHMP4BQ9H444 224 aaKnown RBP14.94□□□□□ -0.02
CPNE8-203ENST00000538596 MIS18AQ9NYP9 233 aa14.94□□□□□ -0.02
CPNE8-203ENST00000538596 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.94□□□□□ -0.02
CPNE8-203ENST00000538596 ACEP12821 1306 aa14.94□□□□□ -0.02
CPNE8-203ENST00000538596 GSPT1P15170 499 aaKnown RBP14.93□□□□□ -0.02
CPNE8-203ENST00000538596 TTC21BQ7Z4L5 1316 aa14.93□□□□□ -0.02
CPNE8-203ENST00000538596 AKAP12Q02952 1782 aa14.92□□□□□ -0.02
CPNE8-203ENST00000538596 APBB1O00213 710 aa14.92□□□□□ -0.02
CPNE8-203ENST00000538596 TRAK2O60296 914 aa14.92□□□□□ -0.02
CPNE8-203ENST00000538596 DDIT3P35638 169 aa14.92□□□□□ -0.02
CPNE8-203ENST00000538596 HSP90AB1P08238 724 aaKnown RBP14.92□□□□□ -0.02
CPNE8-203ENST00000538596 OTUD7AQ8TE49 926 aaPredicted RBP14.92□□□□□ -0.02
CPNE8-203ENST00000538596 SNX21Q969T3 373 aa14.92□□□□□ -0.02
CPNE8-203ENST00000538596 ITSN1Q15811 1721 aa14.92□□□□□ -0.02
CPNE8-203ENST00000538596 NCOA3Q9Y6Q9 1424 aa14.92□□□□□ -0.02
CPNE8-203ENST00000538596 TECPR2O15040 1411 aa14.91□□□□□ -0.02
CPNE8-203ENST00000538596 FOXO3O43524 673 aa14.91□□□□□ -0.02
CPNE8-203ENST00000538596 PLEKHM2Q8IWE5 1019 aa14.91□□□□□ -0.02
CPNE8-203ENST00000538596 XRCC6P12956 609 aaKnown RBP eCLIP14.9□□□□□ -0.02
CPNE8-203ENST00000538596 LTKP29376 864 aa14.9□□□□□ -0.02
CPNE8-203ENST00000538596 SLC26A8Q96RN1 970 aa14.9□□□□□ -0.02
CPNE8-203ENST00000538596 CHL1O00533 1208 aa14.9□□□□□ -0.02
CPNE8-203ENST00000538596 SMARCA5O60264 1052 aaPredicted RBP14.9□□□□□ -0.02
CPNE8-203ENST00000538596 TNPO1Q92973 898 aaKnown RBP14.9□□□□□ -0.02
CPNE8-203ENST00000538596 PANK2Q9BZ23 570 aa14.9□□□□□ -0.02
CPNE8-203ENST00000538596 RGS12O14924 1447 aa14.9□□□□□ -0.02
CPNE8-203ENST00000538596 TNRQ92752 1358 aa14.89□□□□□ -0.03
CPNE8-203ENST00000538596 SIRT1Q96EB6 747 aa14.89□□□□□ -0.03
CPNE8-203ENST00000538596 DCTPP1Q9H773 170 aa14.89□□□□□ -0.03
CPNE8-203ENST00000538596 TMEM2Q9UHN6 1383 aa14.89□□□□□ -0.03
CPNE8-203ENST00000538596 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.89□□□□□ -0.03
CPNE8-203ENST00000538596 INTS3Q68E01 1043 aaKnown RBP14.89□□□□□ -0.03
CPNE8-203ENST00000538596 GOLGA6L3A6NEY3 463 aa14.88□□□□□ -0.03
CPNE8-203ENST00000538596 HDGFP51858 240 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms