RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 U2SURPO15042 1029 aaKnown RBP22.96■■□□□ 1.27
SFSWAP-207ENST00000538548 CSPP1Q1MSJ5 1256 aa22.96■■□□□ 1.27
SFSWAP-207ENST00000538548 BRPF1P55201 1214 aaPredicted RBP22.95■■□□□ 1.27
SFSWAP-207ENST00000538548 UQCRHLA0A096LP55 91 aa22.95■■□□□ 1.26
SFSWAP-207ENST00000538548 UQCRHP07919 91 aa22.95■■□□□ 1.26
SFSWAP-207ENST00000538548 NCLP19338 710 aaKnown RBP22.95■■□□□ 1.26
SFSWAP-207ENST00000538548 ZKSCAN5Q9Y2L8 839 aa22.95■■□□□ 1.26
SFSWAP-207ENST00000538548 ADGRB1O14514 1584 aa22.94■■□□□ 1.26
SFSWAP-207ENST00000538548 ZBTB7BO15156 539 aaPredicted RBP22.94■■□□□ 1.26
SFSWAP-207ENST00000538548 XPCQ01831 940 aaPredicted RBP22.94■■□□□ 1.26
SFSWAP-207ENST00000538548 ZNF428Q96B54 188 aa22.94■■□□□ 1.26
SFSWAP-207ENST00000538548 CHGAP10645 457 aaKnown RBP22.94■■□□□ 1.26
SFSWAP-207ENST00000538548 C14orf93Q9H972 538 aaKnown RBP22.94■■□□□ 1.26
SFSWAP-207ENST00000538548 COL3A1P02461 1466 aaPredicted RBP22.93■■□□□ 1.26
SFSWAP-207ENST00000538548 DYNC1I1O14576 645 aa22.93■■□□□ 1.26
SFSWAP-207ENST00000538548 CFAP44Q96MT7 982 aa22.93■■□□□ 1.26
SFSWAP-207ENST00000538548 EFCAB6Q5THR3 1501 aa22.93■■□□□ 1.26
SFSWAP-207ENST00000538548 PRIM1P49642 420 aaKnown RBP22.93■■□□□ 1.26
SFSWAP-207ENST00000538548 ADGRB3O60242 1522 aa22.92■■□□□ 1.26
SFSWAP-207ENST00000538548 MROH1Q8NDA8 1641 aa22.92■■□□□ 1.26
SFSWAP-207ENST00000538548 YEATS2Q9ULM3 1422 aa22.92■■□□□ 1.26
SFSWAP-207ENST00000538548 CWC22Q9HCG8 908 aaKnown RBP22.91■■□□□ 1.26
SFSWAP-207ENST00000538548 PIK3R4Q99570 1358 aa22.91■■□□□ 1.26
SFSWAP-207ENST00000538548 EVC2Q86UK5 1308 aa22.9■■□□□ 1.26
SFSWAP-207ENST00000538548 ARHGAP45Q92619 1136 aa22.89■■□□□ 1.25
SFSWAP-207ENST00000538548 CCDC39Q9UFE4 941 aa22.88■■□□□ 1.25
SFSWAP-207ENST00000538548 SMAP1Q8IYB5 467 aaPredicted RBP22.87■■□□□ 1.25
SFSWAP-207ENST00000538548 C1orf115Q9H7X2 142 aa22.87■■□□□ 1.25
SFSWAP-207ENST00000538548 PTCH1Q13635 1447 aa22.87■■□□□ 1.25
SFSWAP-207ENST00000538548 SIRT2Q8IXJ6 389 aa22.87■■□□□ 1.25
SFSWAP-207ENST00000538548 GPT2Q8TD30 523 aa22.87■■□□□ 1.25
SFSWAP-207ENST00000538548 TULP4Q9NRJ4 1543 aa22.86■■□□□ 1.25
SFSWAP-207ENST00000538548 PKP1Q13835 747 aa22.86■■□□□ 1.25
SFSWAP-207ENST00000538548 NUTM2DQ5VT03 806 aaPredicted RBP22.86■■□□□ 1.25
SFSWAP-207ENST00000538548 SASS6Q6UVJ0 657 aa22.86■■□□□ 1.25
SFSWAP-207ENST00000538548 LRSAM1Q6UWE0 723 aa22.86■■□□□ 1.25
SFSWAP-207ENST00000538548 PPLO60437 1756 aa22.86■■□□□ 1.25
SFSWAP-207ENST00000538548 PRPF40AO75400 957 aaKnown RBP22.86■■□□□ 1.25
SFSWAP-207ENST00000538548 GSPT1P15170 499 aaKnown RBP22.86■■□□□ 1.25
SFSWAP-207ENST00000538548 TMEM132EQ6IEE7 984 aa22.85■■□□□ 1.25
SFSWAP-207ENST00000538548 FRMPD1Q5SYB0 1578 aa22.85■■□□□ 1.25
SFSWAP-207ENST00000538548 MLECQ14165 292 aa22.84■■□□□ 1.25
SFSWAP-207ENST00000538548 USP26Q9BXU7 913 aa22.84■■□□□ 1.25
SFSWAP-207ENST00000538548 RBM27Q9P2N5 1060 aaKnown RBP22.83■■□□□ 1.25
SFSWAP-207ENST00000538548 HECW2Q9P2P5 1572 aa22.83■■□□□ 1.25
SFSWAP-207ENST00000538548 PLEKHM2Q8IWE5 1019 aa22.82■■□□□ 1.24
SFSWAP-207ENST00000538548 MRPL50Q8N5N7 158 aaKnown RBP22.82■■□□□ 1.24
SFSWAP-207ENST00000538548 NEO1Q92859 1461 aa22.82■■□□□ 1.24
SFSWAP-207ENST00000538548 MLH3Q9UHC1 1453 aa22.82■■□□□ 1.24
SFSWAP-207ENST00000538548 ST18O60284 1047 aa22.81■■□□□ 1.24
SFSWAP-207ENST00000538548 ABCC4O15439 1325 aa22.81■■□□□ 1.24
SFSWAP-207ENST00000538548 TMEM63CQ9P1W3 806 aa22.81■■□□□ 1.24
SFSWAP-207ENST00000538548 A0A1W2PP64 1363 aa22.81■■□□□ 1.24
SFSWAP-207ENST00000538548 TTC22Q5TAA0 569 aa22.8■■□□□ 1.24
SFSWAP-207ENST00000538548 LMTK2Q8IWU2 1503 aa22.8■■□□□ 1.24
SFSWAP-207ENST00000538548 DIP2BQ9P265 1576 aa22.8■■□□□ 1.24
SFSWAP-207ENST00000538548 INTS3Q68E01 1043 aaKnown RBP22.8■■□□□ 1.24
SFSWAP-207ENST00000538548 ZDHHC9Q9Y397 364 aa22.8■■□□□ 1.24
SFSWAP-207ENST00000538548 SYCE3A1L190 88 aa22.79■■□□□ 1.24
SFSWAP-207ENST00000538548 DIAPH1O60610 1272 aaKnown RBP22.79■■□□□ 1.24
SFSWAP-207ENST00000538548 GGNBP2Q9H3C7 697 aa22.79■■□□□ 1.24
SFSWAP-207ENST00000538548 GLI2P10070 1586 aa22.79■■□□□ 1.24
SFSWAP-207ENST00000538548 VAMP4O75379 141 aa22.79■■□□□ 1.24
SFSWAP-207ENST00000538548 ZGPATQ8N5A5 531 aaKnown RBP22.78■■□□□ 1.24
SFSWAP-207ENST00000538548 CABP2Q9NPB3 220 aa22.78■■□□□ 1.24
SFSWAP-207ENST00000538548 ARHGEF28Q8N1W1 1705 aaKnown RBP22.78■■□□□ 1.24
SFSWAP-207ENST00000538548 MBD3O95983 291 aa22.78■■□□□ 1.24
SFSWAP-207ENST00000538548 ANKRD26Q9UPS8 1709 aa22.77■■□□□ 1.24
SFSWAP-207ENST00000538548 RPGRIP1LQ68CZ1 1315 aa22.77■■□□□ 1.24
SFSWAP-207ENST00000538548 PNPLA6Q8IY17 1366 aa22.77■■□□□ 1.24
SFSWAP-207ENST00000538548 FCHSD2O94868 740 aa22.77■■□□□ 1.23
SFSWAP-207ENST00000538548 DCTPP1Q9H773 170 aa22.75■■□□□ 1.23
SFSWAP-207ENST00000538548 NPATQ14207 1427 aa22.75■■□□□ 1.23
SFSWAP-207ENST00000538548 KIAA2012Q0VF49 1180 aa22.75■■□□□ 1.23
SFSWAP-207ENST00000538548 CCDC94Q9BW85 323 aaPredicted RBP22.75■■□□□ 1.23
SFSWAP-207ENST00000538548 LRRC7Q96NW7 1537 aa22.75■■□□□ 1.23
SFSWAP-207ENST00000538548 CASC1Q6TDU7 716 aa22.74■■□□□ 1.23
SFSWAP-207ENST00000538548 CDC42BPGQ6DT37 1551 aa22.74■■□□□ 1.23
SFSWAP-207ENST00000538548 RICTORQ6R327 1708 aa22.73■■□□□ 1.23
SFSWAP-207ENST00000538548 NSFL1CQ9UNZ2 370 aaKnown RBP22.73■■□□□ 1.23
SFSWAP-207ENST00000538548 DIP2CQ9Y2E4 1556 aa22.73■■□□□ 1.23
SFSWAP-207ENST00000538548 FYB1O15117 783 aa22.73■■□□□ 1.23
SFSWAP-207ENST00000538548 KIF24Q5T7B8 1368 aa22.72■■□□□ 1.23
SFSWAP-207ENST00000538548 FAM135BQ49AJ0 1406 aa22.72■■□□□ 1.23
SFSWAP-207ENST00000538548 MYRIPQ8NFW9 859 aa22.72■■□□□ 1.23
SFSWAP-207ENST00000538548 API5Q9BZZ5 524 aaKnown RBP22.72■■□□□ 1.23
SFSWAP-207ENST00000538548 FBXO31Q5XUX0 539 aaPredicted RBP22.71■■□□□ 1.23
SFSWAP-207ENST00000538548 TSPYL6Q8N831 410 aa22.71■■□□□ 1.23
SFSWAP-207ENST00000538548 PTMAP06454 111 aaKnown RBP22.71■■□□□ 1.23
SFSWAP-207ENST00000538548 RNF214Q8ND24 703 aa22.71■■□□□ 1.23
SFSWAP-207ENST00000538548 REC8O95072 547 aa22.7■■□□□ 1.22
SFSWAP-207ENST00000538548 ARID3AQ99856 593 aa22.7■■□□□ 1.22
SFSWAP-207ENST00000538548 KNDC1Q76NI1 1749 aa22.7■■□□□ 1.22
SFSWAP-207ENST00000538548 UTP14CQ5TAP6 766 aaKnown RBP22.7■■□□□ 1.22
SFSWAP-207ENST00000538548 ZFYVE9O95405 1425 aa22.69■■□□□ 1.22
SFSWAP-207ENST00000538548 PRKAR2BP31323 418 aa22.69■■□□□ 1.22
SFSWAP-207ENST00000538548 GNAI1P63096 354 aa22.69■■□□□ 1.22
SFSWAP-207ENST00000538548 TSPY26PQ9H489 355 aa22.69■■□□□ 1.22
SFSWAP-207ENST00000538548 IFT57Q9NWB7 429 aa22.69■■□□□ 1.22
SFSWAP-207ENST00000538548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms