RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CLUAP1Q96AJ1 413 aa18.36■□□□□ 0.53
ACTN1-205ENST00000538545 ZBTB7CA1YPR0 619 aa18.35■□□□□ 0.53
ACTN1-205ENST00000538545 RARSP54136 660 aaKnown RBP18.35■□□□□ 0.53
ACTN1-205ENST00000538545 PROSER2Q86WR7 435 aaPredicted RBP18.35■□□□□ 0.53
ACTN1-205ENST00000538545 FMN2Q9NZ56 1722 aa18.35■□□□□ 0.53
ACTN1-205ENST00000538545 CANXP27824 592 aaKnown RBP18.34■□□□□ 0.53
ACTN1-205ENST00000538545 LTV1Q96GA3 475 aaPredicted RBP18.34■□□□□ 0.53
ACTN1-205ENST00000538545 RBM19Q9Y4C8 960 aaKnown RBP18.34■□□□□ 0.53
ACTN1-205ENST00000538545 PIK3C2AO00443 1686 aa18.34■□□□□ 0.53
ACTN1-205ENST00000538545 COG6Q9Y2V7 657 aa18.33■□□□□ 0.52
ACTN1-205ENST00000538545 LMOD2Q6P5Q4 547 aa18.32■□□□□ 0.52
ACTN1-205ENST00000538545 DDX17Q92841 729 aaKnown RBP18.32■□□□□ 0.52
ACTN1-205ENST00000538545 ELL2O00472 640 aaPredicted RBP18.32■□□□□ 0.52
ACTN1-205ENST00000538545 NEFMP07197 916 aa18.32■□□□□ 0.52
ACTN1-205ENST00000538545 AMPHP49418 695 aa18.32■□□□□ 0.52
ACTN1-205ENST00000538545 MYH16Q9H6N6 1097 aa18.31■□□□□ 0.52
ACTN1-205ENST00000538545 TTC21AQ8NDW8 1320 aa18.31■□□□□ 0.52
ACTN1-205ENST00000538545 RLBP1P12271 317 aa18.31■□□□□ 0.52
ACTN1-205ENST00000538545 PSME1Q06323 249 aa18.31■□□□□ 0.52
ACTN1-205ENST00000538545 NFE2L2Q16236 605 aa18.31■□□□□ 0.52
ACTN1-205ENST00000538545 TCERG1O14776 1098 aaKnown RBP18.31■□□□□ 0.52
ACTN1-205ENST00000538545 USP31Q70CQ4 1352 aa18.31■□□□□ 0.52
ACTN1-205ENST00000538545 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.3■□□□□ 0.52
ACTN1-205ENST00000538545 ADGRL3Q9HAR2 1447 aa18.3■□□□□ 0.52
ACTN1-205ENST00000538545 ANKARQ7Z5J8 1434 aa18.29■□□□□ 0.52
ACTN1-205ENST00000538545 KDM4FA0A1W2PPD8 638 aa18.29■□□□□ 0.52
ACTN1-205ENST00000538545 DLG5Q8TDM6 1919 aa18.29■□□□□ 0.52
ACTN1-205ENST00000538545 PNNQ9H307 717 aaKnown RBP18.28■□□□□ 0.52
ACTN1-205ENST00000538545 USHBP1Q8N6Y0 703 aa18.27■□□□□ 0.52
ACTN1-205ENST00000538545 MCM10Q7L590 875 aa18.27■□□□□ 0.52
ACTN1-205ENST00000538545 TSPYL6Q8N831 410 aa18.27■□□□□ 0.51
ACTN1-205ENST00000538545 SSH1Q8WYL5 1049 aa18.26■□□□□ 0.51
ACTN1-205ENST00000538545 EYA1Q99502 592 aa18.26■□□□□ 0.51
ACTN1-205ENST00000538545 MARF1Q9Y4F3 1742 aaKnown RBP18.25■□□□□ 0.51
ACTN1-205ENST00000538545 SMC4Q9NTJ3 1288 aa18.25■□□□□ 0.51
ACTN1-205ENST00000538545 HOXC9P31274 260 aa18.24■□□□□ 0.51
ACTN1-205ENST00000538545 KRT24Q2M2I5 525 aa18.24■□□□□ 0.51
ACTN1-205ENST00000538545 FLT4P35916 1363 aa18.23■□□□□ 0.51
ACTN1-205ENST00000538545 STRCP1A6NGW2 1772 aa18.23■□□□□ 0.51
ACTN1-205ENST00000538545 MBIPQ9NS73 344 aa18.23■□□□□ 0.51
ACTN1-205ENST00000538545 MIS18AQ9NYP9 233 aa18.22■□□□□ 0.51
ACTN1-205ENST00000538545 SBNO1A3KN83 1393 aa18.22■□□□□ 0.51
ACTN1-205ENST00000538545 TMEM94Q12767 1356 aa18.22■□□□□ 0.51
ACTN1-205ENST00000538545 MTHFSDQ2M296 383 aaKnown RBP18.2■□□□□ 0.5
ACTN1-205ENST00000538545 NOB1Q9ULX3 412 aaKnown RBP18.2■□□□□ 0.5
ACTN1-205ENST00000538545 IGHDP01880 384 aa18.19■□□□□ 0.5
ACTN1-205ENST00000538545 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
ACTN1-205ENST00000538545 C19orf44Q9H6X5 657 aa18.19■□□□□ 0.5
ACTN1-205ENST00000538545 C8orf58Q8NAV2 365 aa18.19■□□□□ 0.5
ACTN1-205ENST00000538545 IL16Q14005 1332 aa18.18■□□□□ 0.5
ACTN1-205ENST00000538545 TRIM27P14373 513 aa18.18■□□□□ 0.5
ACTN1-205ENST00000538545 PDE3AQ14432 1141 aa18.18■□□□□ 0.5
ACTN1-205ENST00000538545 KRT28Q7Z3Y7 464 aa18.18■□□□□ 0.5
ACTN1-205ENST00000538545 LRRC59Q96AG4 307 aaKnown RBP18.18■□□□□ 0.5
ACTN1-205ENST00000538545 KDM2BQ8NHM5 1336 aa18.17■□□□□ 0.5
ACTN1-205ENST00000538545 RGPD1P0DJD0 1748 aa18.16■□□□□ 0.5
ACTN1-205ENST00000538545 ATF3P18847 181 aa18.16■□□□□ 0.5
ACTN1-205ENST00000538545 C1orf167Q5SNV9 1468 aa18.16■□□□□ 0.5
ACTN1-205ENST00000538545 NWD1Q149M9 1564 aa18.16■□□□□ 0.5
ACTN1-205ENST00000538545 VAMP4O75379 141 aa18.15■□□□□ 0.5
ACTN1-205ENST00000538545 ZNF853P0CG23 659 aa18.15■□□□□ 0.5
ACTN1-205ENST00000538545 ZKSCAN2Q63HK3 967 aa18.15■□□□□ 0.5
ACTN1-205ENST00000538545 FTSJ3Q8IY81 847 aaKnown RBP18.15■□□□□ 0.5
ACTN1-205ENST00000538545 CABLES1Q8TDN4 633 aa18.15■□□□□ 0.5
ACTN1-205ENST00000538545 LTN1O94822 1766 aa18.15■□□□□ 0.5
ACTN1-205ENST00000538545 IGSF1Q8N6C5 1336 aa18.15■□□□□ 0.5
ACTN1-205ENST00000538545 GCP02774 474 aa18.14■□□□□ 0.5
ACTN1-205ENST00000538545 ZC3H6P61129 1189 aaKnown RBP18.14■□□□□ 0.5
ACTN1-205ENST00000538545 GNAI1P63096 354 aa18.14■□□□□ 0.5
ACTN1-205ENST00000538545 CFAP44Q96MT7 982 aa18.14■□□□□ 0.5
ACTN1-205ENST00000538545 PCDHB15Q9Y5E8 787 aa18.14■□□□□ 0.5
ACTN1-205ENST00000538545 RGS3P49796 1198 aa18.14■□□□□ 0.49
ACTN1-205ENST00000538545 NBPF6Q5VWK0 638 aa18.14■□□□□ 0.49
ACTN1-205ENST00000538545 NBPF4Q96M43 638 aa18.14■□□□□ 0.49
ACTN1-205ENST00000538545 IFT57Q9NWB7 429 aa18.14■□□□□ 0.49
ACTN1-205ENST00000538545 ZNF335Q9H4Z2 1342 aaPredicted RBP18.13■□□□□ 0.49
ACTN1-205ENST00000538545 DZIP1LQ8IYY4 767 aaKnown RBP18.13■□□□□ 0.49
ACTN1-205ENST00000538545 TWISTNBQ3B726 338 aaPredicted RBP18.13■□□□□ 0.49
ACTN1-205ENST00000538545 AXIN2Q9Y2T1 843 aa18.13■□□□□ 0.49
ACTN1-205ENST00000538545 ARHGEF10O15013 1369 aa18.12■□□□□ 0.49
ACTN1-205ENST00000538545 ITPRIPQ8IWB1 547 aa18.12■□□□□ 0.49
ACTN1-205ENST00000538545 ATF7IPQ6VMQ6 1270 aa18.11■□□□□ 0.49
ACTN1-205ENST00000538545 TMEM57Q8N5G2 664 aa18.11■□□□□ 0.49
ACTN1-205ENST00000538545 RGPD2P0DJD1 1756 aa18.11■□□□□ 0.49
ACTN1-205ENST00000538545 LMOD3Q0VAK6 560 aa18.11■□□□□ 0.49
ACTN1-205ENST00000538545 IP6K1Q92551 441 aa18.1■□□□□ 0.49
ACTN1-205ENST00000538545 LMTK3Q96Q04 1460 aa18.1■□□□□ 0.49
ACTN1-205ENST00000538545 MVPQ14764 893 aaKnown RBP18.1■□□□□ 0.49
ACTN1-205ENST00000538545 NFAT5O94916 1531 aa18.1■□□□□ 0.49
ACTN1-205ENST00000538545 KDRP35968 1356 aa18.1■□□□□ 0.49
ACTN1-205ENST00000538545 MST1RQ04912 1400 aa18.1■□□□□ 0.49
ACTN1-205ENST00000538545 CENPQQ7L2Z9 268 aaPredicted RBP18.09■□□□□ 0.49
ACTN1-205ENST00000538545 CT47B1P0C2W7 299 aaPredicted RBP18.08■□□□□ 0.48
ACTN1-205ENST00000538545 CALD1Q05682 793 aaKnown RBP18.08■□□□□ 0.48
ACTN1-205ENST00000538545 RTF1Q92541 710 aaKnown RBP18.08■□□□□ 0.48
ACTN1-205ENST00000538545 STRCQ7RTU9 1775 aa18.07■□□□□ 0.48
ACTN1-205ENST00000538545 ARHGEF25Q86VW2 580 aa18.07■□□□□ 0.48
ACTN1-205ENST00000538545 MRPL50Q8N5N7 158 aaKnown RBP18.07■□□□□ 0.48
ACTN1-205ENST00000538545 NECTIN2Q92692 538 aa18.06■□□□□ 0.48
ACTN1-205ENST00000538545 CHL1O00533 1208 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms