RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 STK11IPQ8N1F8 1099 aa8.15□□□□□ -1.1
SORT1-209ENST00000538502 SMARCA4P51532 1647 aa8.15□□□□□ -1.1
SORT1-209ENST00000538502 CASKIN1Q8WXD9 1431 aa8.15□□□□□ -1.1
SORT1-209ENST00000538502 ERICH4A6NGS2 130 aa8.15□□□□□ -1.1
SORT1-209ENST00000538502 JAKMIP3Q5VZ66 844 aa8.15□□□□□ -1.1
SORT1-209ENST00000538502 TTLL5Q6EMB2 1281 aa8.15□□□□□ -1.1
SORT1-209ENST00000538502 CTDP1Q9Y5B0 961 aaPredicted RBP8.15□□□□□ -1.1
SORT1-209ENST00000538502 CCAR1Q8IX12 1150 aaKnown RBP8.15□□□□□ -1.1
SORT1-209ENST00000538502 CDK5RAP3Q96JB5 506 aa8.15□□□□□ -1.1
SORT1-209ENST00000538502 ADAMTS8Q9UP79 889 aa8.15□□□□□ -1.1
SORT1-209ENST00000538502 EPB41L2O43491 1005 aaKnown RBP8.15□□□□□ -1.1
SORT1-209ENST00000538502 IVLP07476 585 aa8.15□□□□□ -1.1
SORT1-209ENST00000538502 PPP2R1AP30153 589 aa8.15□□□□□ -1.1
SORT1-209ENST00000538502 GTF2E1P29083 439 aaPredicted RBP8.15□□□□□ -1.11
SORT1-209ENST00000538502 IMMTQ16891 758 aaKnown RBP8.15□□□□□ -1.11
SORT1-209ENST00000538502 CTR9Q6PD62 1173 aa8.15□□□□□ -1.11
SORT1-209ENST00000538502 CLCN1P35523 988 aa8.15□□□□□ -1.11
SORT1-209ENST00000538502 ENOX2Q16206 610 aaKnown RBP8.15□□□□□ -1.11
SORT1-209ENST00000538502 CCDC91Q7Z6B0 441 aa8.15□□□□□ -1.11
SORT1-209ENST00000538502 WASF1Q92558 559 aa8.15□□□□□ -1.11
SORT1-209ENST00000538502 ANO10Q9NW15 660 aa8.15□□□□□ -1.11
SORT1-209ENST00000538502 NOL7Q9UMY1 257 aaKnown RBP8.15□□□□□ -1.11
SORT1-209ENST00000538502 TBC1D2BQ9UPU7 963 aa8.15□□□□□ -1.11
SORT1-209ENST00000538502 ZNF397Q8NF99 534 aaPredicted RBP8.14□□□□□ -1.11
SORT1-209ENST00000538502 CEP131Q9UPN4 1083 aa8.14□□□□□ -1.11
SORT1-209ENST00000538502 KIF5CO60282 957 aa8.14□□□□□ -1.11
SORT1-209ENST00000538502 TUBB4BP68371 445 aa8.14□□□□□ -1.11
SORT1-209ENST00000538502 LARP1BQ659C4 914 aaKnown RBP8.14□□□□□ -1.11
SORT1-209ENST00000538502 NEFHP12036 1026 aa8.14□□□□□ -1.11
SORT1-209ENST00000538502 CBX1P83916 185 aa8.14□□□□□ -1.11
SORT1-209ENST00000538502 EHBP1L1Q8N3D4 1523 aa8.14□□□□□ -1.11
SORT1-209ENST00000538502 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.14□□□□□ -1.118e-7■■■■■ 98.5
SORT1-209ENST00000538502 ME1P48163 572 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 GAS2L2Q8NHY3 880 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 TAF4BQ92750 862 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 SFPQP23246 707 aaKnown RBP eCLIP8.13□□□□□ -1.11
SORT1-209ENST00000538502 GIGYF2Q6Y7W6 1299 aaKnown RBP8.13□□□□□ -1.11
SORT1-209ENST00000538502 LUZP1Q86V48 1076 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 TRIM22Q8IYM9 498 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 EFCAB5A4FU69 1503 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 CCDC171Q6TFL3 1326 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 EIF2S2P20042 333 aaKnown RBP8.13□□□□□ -1.11
SORT1-209ENST00000538502 HS1BP3Q53T59 392 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 WASHC4Q2M389 1173 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 ARHGAP29Q52LW3 1261 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 VPS37DQ86XT2 251 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.13□□□□□ -1.112e-6■□□□□ 9.9
SORT1-209ENST00000538502 CCDC57Q2TAC2 916 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 SCAND2PQ9GZW5 306 aaPredicted RBP8.13□□□□□ -1.11
SORT1-209ENST00000538502 PDRG1Q9NUG6 133 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 ZSCAN25Q6NSZ9 544 aa8.13□□□□□ -1.11
SORT1-209ENST00000538502 PNISRQ8TF01 805 aaKnown RBP8.13□□□□□ -1.11
SORT1-209ENST00000538502 FOSBP53539 338 aa8.12□□□□□ -1.11
SORT1-209ENST00000538502 SH2B1Q9NRF2 756 aaPredicted RBP8.12□□□□□ -1.11
SORT1-209ENST00000538502 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.12□□□□□ -1.11
SORT1-209ENST00000538502 ATF7IPQ6VMQ6 1270 aa8.12□□□□□ -1.11
SORT1-209ENST00000538502 NOB1Q9ULX3 412 aaKnown RBP8.12□□□□□ -1.11
SORT1-209ENST00000538502 GCOM1H8Y6P7 765 aaPredicted RBP8.12□□□□□ -1.11
SORT1-209ENST00000538502 MYZAPP0CAP1 466 aa8.12□□□□□ -1.11
SORT1-209ENST00000538502 KIAA1328Q86T90 577 aa8.12□□□□□ -1.11
SORT1-209ENST00000538502 TCP11L2Q8N4U5 519 aa8.12□□□□□ -1.11
SORT1-209ENST00000538502 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.12□□□□□ -1.11
SORT1-209ENST00000538502 CENPHQ9H3R5 247 aa8.12□□□□□ -1.11
SORT1-209ENST00000538502 MAP2K1Q02750 393 aaPredicted RBP8.12□□□□□ -1.11
SORT1-209ENST00000538502 PPP4R3BQ5MIZ7 849 aa8.12□□□□□ -1.11
SORT1-209ENST00000538502 RPAP2Q8IXW5 612 aaPredicted RBP8.12□□□□□ -1.11
SORT1-209ENST00000538502 KRT222Q8N1A0 295 aa8.12□□□□□ -1.11
SORT1-209ENST00000538502 FMNL2Q96PY5 1086 aa8.12□□□□□ -1.11
SORT1-209ENST00000538502 SYCE3A1L190 88 aa8.11□□□□□ -1.11
SORT1-209ENST00000538502 ZFYVE27Q5T4F4 411 aa8.11□□□□□ -1.11
SORT1-209ENST00000538502 RIC3Q7Z5B4 369 aa8.11□□□□□ -1.11
SORT1-209ENST00000538502 CTNNA3Q9UI47 895 aa8.11□□□□□ -1.11
SORT1-209ENST00000538502 CCDC9Q9Y3X0 531 aaKnown RBP8.11□□□□□ -1.11
SORT1-209ENST00000538502 CCDC150Q8NCX0 1101 aa8.11□□□□□ -1.11
SORT1-209ENST00000538502 DDX19AQ9NUU7 478 aaKnown RBP8.11□□□□□ -1.11
SORT1-209ENST00000538502 SURF6O75683 361 aaKnown RBP8.11□□□□□ -1.11
SORT1-209ENST00000538502 TNNT1P13805 278 aa8.11□□□□□ -1.11
SORT1-209ENST00000538502 BRPF1P55201 1214 aaPredicted RBP8.11□□□□□ -1.11
SORT1-209ENST00000538502 LTV1Q96GA3 475 aaPredicted RBP8.11□□□□□ -1.11
SORT1-209ENST00000538502 NCOA2Q15596 1464 aa8.11□□□□□ -1.11
SORT1-209ENST00000538502 BLOC1S2Q6QNY1 142 aa8.11□□□□□ -1.11
SORT1-209ENST00000538502 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.11□□□□□ -1.11
SORT1-209ENST00000538502 ANKRD50Q9ULJ7 1429 aa8.11□□□□□ -1.11
SORT1-209ENST00000538502 TWISTNBQ3B726 338 aaPredicted RBP8.11□□□□□ -1.11
SORT1-209ENST00000538502 ZMYND15Q9H091 742 aa8.11□□□□□ -1.11
SORT1-209ENST00000538502 CADPSQ9ULU8 1353 aa8.1□□□□□ -1.11
SORT1-209ENST00000538502 MSH5O43196 834 aa8.1□□□□□ -1.11
SORT1-209ENST00000538502 SMC1AQ14683 1233 aaKnown RBP8.1□□□□□ -1.11
SORT1-209ENST00000538502 KIAA1107Q9UPP5 1409 aa8.1□□□□□ -1.11
SORT1-209ENST00000538502 FAM193AP78312 1265 aa8.1□□□□□ -1.11
SORT1-209ENST00000538502 MLECQ14165 292 aa8.1□□□□□ -1.11
SORT1-209ENST00000538502 NAA15Q9BXJ9 866 aaKnown RBP8.1□□□□□ -1.11
SORT1-209ENST00000538502 CLIP2Q9UDT6 1046 aa8.1□□□□□ -1.11
SORT1-209ENST00000538502 NKTRP30414 1462 aaKnown RBP8.1□□□□□ -1.11
SORT1-209ENST00000538502 GTF2A1P52655 376 aaPredicted RBP8.1□□□□□ -1.11
SORT1-209ENST00000538502 EXOSC9Q06265 439 aaKnown RBP8.1□□□□□ -1.11
SORT1-209ENST00000538502 SKIDA1Q1XH10 827 aa8.1□□□□□ -1.11
SORT1-209ENST00000538502 CDCA7LQ96GN5 454 aa8.1□□□□□ -1.11
SORT1-209ENST00000538502 SPA17Q15506 151 aa8.1□□□□□ -1.11
SORT1-209ENST00000538502 PHAXQ9H814 394 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms