RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 ELL2O00472 640 aaPredicted RBP18.03■□□□□ 0.48
USP44-203ENST00000537435 ZBTB7BO15156 539 aaPredicted RBP18.03■□□□□ 0.48
USP44-203ENST00000537435 CHD1LQ86WJ1 897 aa18.03■□□□□ 0.48
USP44-203ENST00000537435 SPRYD3Q8NCJ5 442 aa18.03■□□□□ 0.48
USP44-203ENST00000537435 NUDT16Q96DE0 195 aaKnown RBP18.03■□□□□ 0.48
USP44-203ENST00000537435 MBIPQ9NS73 344 aa18.03■□□□□ 0.48
USP44-203ENST00000537435 CDK12Q9NYV4 1490 aaPredicted RBP18.03■□□□□ 0.48
USP44-203ENST00000537435 NCKAP5LQ9HCH0 1330 aa18.03■□□□□ 0.48
USP44-203ENST00000537435 AATKQ6ZMQ8 1374 aa18.03■□□□□ 0.48
USP44-203ENST00000537435 ZNF853P0CG23 659 aa18.03■□□□□ 0.48
USP44-203ENST00000537435 ARHGAP45Q92619 1136 aa18.03■□□□□ 0.48
USP44-203ENST00000537435 COG3Q96JB2 828 aa18.03■□□□□ 0.48
USP44-203ENST00000537435 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.02■□□□□ 0.48
USP44-203ENST00000537435 RRS1Q15050 365 aaKnown RBP18.01■□□□□ 0.47
USP44-203ENST00000537435 PTCH1Q13635 1447 aa18.01■□□□□ 0.47
USP44-203ENST00000537435 TSPOAP1O95153 1857 aa18.01■□□□□ 0.47
USP44-203ENST00000537435 CHMP4BQ9H444 224 aaKnown RBP18■□□□□ 0.47
USP44-203ENST00000537435 C1orf115Q9H7X2 142 aa18■□□□□ 0.47
USP44-203ENST00000537435 CCDC61Q9Y6R9 512 aa18■□□□□ 0.47
USP44-203ENST00000537435 NRXN3Q9Y4C0 1643 aa18■□□□□ 0.47
USP44-203ENST00000537435 TWISTNBQ3B726 338 aaPredicted RBP18■□□□□ 0.47
USP44-203ENST00000537435 PIK3R4Q99570 1358 aa18■□□□□ 0.47
USP44-203ENST00000537435 CPS1P31327 1500 aa17.99■□□□□ 0.47
USP44-203ENST00000537435 LMOD3Q0VAK6 560 aa17.99■□□□□ 0.47
USP44-203ENST00000537435 CFAP44Q96MT7 982 aa17.99■□□□□ 0.47
USP44-203ENST00000537435 ANKRD45Q5TZF3 282 aa17.98■□□□□ 0.47
USP44-203ENST00000537435 GCC1Q96CN9 775 aa17.98■□□□□ 0.47
USP44-203ENST00000537435 ABCC4O15439 1325 aa17.98■□□□□ 0.47
USP44-203ENST00000537435 FAM83GA6ND36 823 aa17.98■□□□□ 0.47
USP44-203ENST00000537435 C8orf58Q8NAV2 365 aa17.97■□□□□ 0.47
USP44-203ENST00000537435 BMP2KLQ5H9B9 411 aa17.96■□□□□ 0.47
USP44-203ENST00000537435 HSCBQ8IWL3 235 aa17.96■□□□□ 0.47
USP44-203ENST00000537435 RBM25P49756 843 aaKnown RBP17.96■□□□□ 0.47
USP44-203ENST00000537435 DCTN1Q14203 1278 aa17.96■□□□□ 0.47
USP44-203ENST00000537435 SIRT1Q96EB6 747 aa17.96■□□□□ 0.47
USP44-203ENST00000537435 CHMP5Q9NZZ3 219 aa17.96■□□□□ 0.47
USP44-203ENST00000537435 SIRT2Q8IXJ6 389 aa17.95■□□□□ 0.46
USP44-203ENST00000537435 ESF1Q9H501 851 aaKnown RBP17.95■□□□□ 0.46
USP44-203ENST00000537435 TECPR2O15040 1411 aa17.95■□□□□ 0.46
USP44-203ENST00000537435 PRR36Q9H6K5 1346 aa17.94■□□□□ 0.46
USP44-203ENST00000537435 ZNF692Q9BU19 519 aaPredicted RBP17.94■□□□□ 0.46
USP44-203ENST00000537435 HDGFP51858 240 aaKnown RBP17.94■□□□□ 0.46
USP44-203ENST00000537435 API5Q9BZZ5 524 aaKnown RBP17.94■□□□□ 0.46
USP44-203ENST00000537435 MCM4P33991 863 aa17.93■□□□□ 0.46
USP44-203ENST00000537435 MON2Q7Z3U7 1717 aa17.93■□□□□ 0.46
USP44-203ENST00000537435 AEBP1Q8IUX7 1158 aa17.91■□□□□ 0.46
USP44-203ENST00000537435 KNDC1Q76NI1 1749 aa17.91■□□□□ 0.46
USP44-203ENST00000537435 EIF4A2Q14240 407 aaKnown RBP17.91■□□□□ 0.46
USP44-203ENST00000537435 C3P01024 1663 aa17.9■□□□□ 0.46
USP44-203ENST00000537435 DLG5Q8TDM6 1919 aa17.9■□□□□ 0.46
USP44-203ENST00000537435 SULT6B1Q6IMI4 303 aa17.9■□□□□ 0.46
USP44-203ENST00000537435 SNX21Q969T3 373 aa17.9■□□□□ 0.46
USP44-203ENST00000537435 ROBO2Q9HCK4 1378 aa17.89■□□□□ 0.45
USP44-203ENST00000537435 AKAP12Q02952 1782 aa17.88■□□□□ 0.45
USP44-203ENST00000537435 TBC1D9Q6ZT07 1266 aa17.88■□□□□ 0.45
USP44-203ENST00000537435 TTC21BQ7Z4L5 1316 aa17.88■□□□□ 0.45
USP44-203ENST00000537435 TNRQ92752 1358 aa17.88■□□□□ 0.45
USP44-203ENST00000537435 NCOA3Q9Y6Q9 1424 aa17.87■□□□□ 0.45
USP44-203ENST00000537435 L1TD1Q5T7N2 865 aaKnown RBP17.87■□□□□ 0.45
USP44-203ENST00000537435 KIF24Q5T7B8 1368 aa17.87■□□□□ 0.45
USP44-203ENST00000537435 TMEM2Q9UHN6 1383 aa17.87■□□□□ 0.45
USP44-203ENST00000537435 ITSN1Q15811 1721 aa17.87■□□□□ 0.45
USP44-203ENST00000537435 KRT24Q2M2I5 525 aa17.87■□□□□ 0.45
USP44-203ENST00000537435 KIF2CQ99661 725 aa17.87■□□□□ 0.45
USP44-203ENST00000537435 ACEP12821 1306 aa17.86■□□□□ 0.45
USP44-203ENST00000537435 NUTM2FA1L443 756 aa17.86■□□□□ 0.45
USP44-203ENST00000537435 DDIT3P35638 169 aa17.86■□□□□ 0.45
USP44-203ENST00000537435 NRKQ7Z2Y5 1582 aa17.85■□□□□ 0.45
USP44-203ENST00000537435 INTS3Q68E01 1043 aaKnown RBP17.85■□□□□ 0.45
USP44-203ENST00000537435 MCM10Q7L590 875 aa17.85■□□□□ 0.45
USP44-203ENST00000537435 HSP90AB1P08238 724 aaKnown RBP17.84■□□□□ 0.45
USP44-203ENST00000537435 CHL1O00533 1208 aa17.84■□□□□ 0.45
USP44-203ENST00000537435 OVOS2A0A0J9YW53 1432 aa17.84■□□□□ 0.45
USP44-203ENST00000537435 OVOS2Q6IE36 1432 aa17.84■□□□□ 0.45
USP44-203ENST00000537435 ADAMTS13Q76LX8 1427 aa17.84■□□□□ 0.45
USP44-203ENST00000537435 TRAK2O60296 914 aa17.83■□□□□ 0.45
USP44-203ENST00000537435 HAP1P54257 671 aaPredicted RBP17.83■□□□□ 0.45
USP44-203ENST00000537435 HSP90AB2PQ58FF8 381 aa17.83■□□□□ 0.45
USP44-203ENST00000537435 GZF1Q9H116 711 aaPredicted RBP17.83■□□□□ 0.45
USP44-203ENST00000537435 DCTPP1Q9H773 170 aa17.83■□□□□ 0.45
USP44-203ENST00000537435 PLEKHG3A1L390 1219 aa17.83■□□□□ 0.44
USP44-203ENST00000537435 CDC45O75419 566 aa17.83■□□□□ 0.44
USP44-203ENST00000537435 GSPT1P15170 499 aaKnown RBP17.83■□□□□ 0.44
USP44-203ENST00000537435 PLEKHM2Q8IWE5 1019 aa17.82■□□□□ 0.44
USP44-203ENST00000537435 RGS12O14924 1447 aa17.81■□□□□ 0.44
USP44-203ENST00000537435 CD2BP2O95400 341 aaKnown RBP17.81■□□□□ 0.44
USP44-203ENST00000537435 USP6P35125 1406 aa17.81■□□□□ 0.44
USP44-203ENST00000537435 DDX11L8A8MPP1 907 aa17.81■□□□□ 0.44
USP44-203ENST00000537435 SOX12O15370 315 aa17.81■□□□□ 0.44
USP44-203ENST00000537435 ANKRD44Q8N8A2 993 aa17.81■□□□□ 0.44
USP44-203ENST00000537435 ARXQ96QS3 562 aa17.81■□□□□ 0.44
USP44-203ENST00000537435 GOLGA6L3A6NEY3 463 aa17.8■□□□□ 0.44
USP44-203ENST00000537435 CIZ1Q9ULV3 898 aaPredicted RBP17.8■□□□□ 0.44
USP44-203ENST00000537435 KIAA0232Q92628 1395 aa17.8■□□□□ 0.44
USP44-203ENST00000537435 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.8■□□□□ 0.44
USP44-203ENST00000537435 LTKP29376 864 aa17.8■□□□□ 0.44
USP44-203ENST00000537435 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
USP44-203ENST00000537435 FSD2A1L4K1 749 aa17.79■□□□□ 0.44
USP44-203ENST00000537435 ATP10DQ9P241 1426 aa17.79■□□□□ 0.44
USP44-203ENST00000537435 UBR1Q8IWV7 1749 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms