RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 METP08581 1390 aa22.61■■□□□ 1.21
RAB40C-203ENST00000535977 SLKQ9H2G2 1235 aaPredicted RBP22.61■■□□□ 1.21
RAB40C-203ENST00000535977 CDK12Q9NYV4 1490 aaPredicted RBP22.6■■□□□ 1.21
RAB40C-203ENST00000535977 PRKAR2BP31323 418 aa22.6■■□□□ 1.21
RAB40C-203ENST00000535977 LRRC7Q96NW7 1537 aa22.6■■□□□ 1.21
RAB40C-203ENST00000535977 MAP2P11137 1827 aaKnown RBP22.6■■□□□ 1.21
RAB40C-203ENST00000535977 GOLGA6L3A6NEY3 463 aa22.6■■□□□ 1.21
RAB40C-203ENST00000535977 NFE2L2Q16236 605 aa22.6■■□□□ 1.21
RAB40C-203ENST00000535977 NUDT16Q96DE0 195 aaKnown RBP22.59■■□□□ 1.21
RAB40C-203ENST00000535977 UPF2Q9HAU5 1272 aaKnown RBP22.59■■□□□ 1.21
RAB40C-203ENST00000535977 CHMP4BQ9H444 224 aaKnown RBP22.59■■□□□ 1.21
RAB40C-203ENST00000535977 NOB1Q9ULX3 412 aaKnown RBP22.59■■□□□ 1.21
RAB40C-203ENST00000535977 CPS1P31327 1500 aa22.58■■□□□ 1.21
RAB40C-203ENST00000535977 TNRQ92752 1358 aa22.58■■□□□ 1.21
RAB40C-203ENST00000535977 FSD2A1L4K1 749 aa22.58■■□□□ 1.2
RAB40C-203ENST00000535977 PLPPR3Q6T4P5 718 aa22.58■■□□□ 1.2
RAB40C-203ENST00000535977 COG3Q96JB2 828 aa22.58■■□□□ 1.2
RAB40C-203ENST00000535977 LMOD3Q0VAK6 560 aa22.57■■□□□ 1.2
RAB40C-203ENST00000535977 USP19O94966 1318 aa22.57■■□□□ 1.2
RAB40C-203ENST00000535977 IL13P35225 146 aa22.57■■□□□ 1.2
RAB40C-203ENST00000535977 TXNDC2Q86VQ3 553 aa22.56■■□□□ 1.2
RAB40C-203ENST00000535977 ITPRIPQ8IWB1 547 aa22.56■■□□□ 1.2
RAB40C-203ENST00000535977 BECN1Q14457 450 aa22.55■■□□□ 1.2
RAB40C-203ENST00000535977 MON2Q7Z3U7 1717 aa22.55■■□□□ 1.2
RAB40C-203ENST00000535977 GNAI1P63096 354 aa22.55■■□□□ 1.2
RAB40C-203ENST00000535977 TMEM2Q9UHN6 1383 aa22.54■■□□□ 1.2
RAB40C-203ENST00000535977 ARHGAP45Q92619 1136 aa22.54■■□□□ 1.2
RAB40C-203ENST00000535977 IFT57Q9NWB7 429 aa22.54■■□□□ 1.2
RAB40C-203ENST00000535977 NME9Q86XW9 330 aa22.53■■□□□ 1.2
RAB40C-203ENST00000535977 ZBTB40Q9NUA8 1239 aa22.52■■□□□ 1.2
RAB40C-203ENST00000535977 AKAP12Q02952 1782 aa22.51■■□□□ 1.19
RAB40C-203ENST00000535977 ANTXR1Q9H6X2 564 aa22.51■■□□□ 1.19
RAB40C-203ENST00000535977 EMILIN1Q9Y6C2 1016 aa22.51■■□□□ 1.19
RAB40C-203ENST00000535977 SMC5Q8IY18 1101 aa22.51■■□□□ 1.19
RAB40C-203ENST00000535977 TMEM57Q8N5G2 664 aa22.51■■□□□ 1.19
RAB40C-203ENST00000535977 GZF1Q9H116 711 aaPredicted RBP22.51■■□□□ 1.19
RAB40C-203ENST00000535977 ITSN1Q15811 1721 aa22.49■■□□□ 1.19
RAB40C-203ENST00000535977 ZNF853P0CG23 659 aa22.49■■□□□ 1.19
RAB40C-203ENST00000535977 PHACTR3Q96KR7 559 aa22.49■■□□□ 1.19
RAB40C-203ENST00000535977 HMOX1P09601 288 aa22.49■■□□□ 1.19
RAB40C-203ENST00000535977 UBR1Q8IWV7 1749 aa22.49■■□□□ 1.19
RAB40C-203ENST00000535977 C3P01024 1663 aa22.48■■□□□ 1.19
RAB40C-203ENST00000535977 SEC24BO95487 1268 aa22.48■■□□□ 1.19
RAB40C-203ENST00000535977 VAMP4O75379 141 aa22.47■■□□□ 1.19
RAB40C-203ENST00000535977 FBLN1P23142 703 aa22.47■■□□□ 1.19
RAB40C-203ENST00000535977 TBC1D32Q96NH3 1257 aa22.47■■□□□ 1.19
RAB40C-203ENST00000535977 PDCL3Q9H2J4 239 aa22.47■■□□□ 1.19
RAB40C-203ENST00000535977 ERBB4Q15303 1308 aa22.47■■□□□ 1.19
RAB40C-203ENST00000535977 PLEKHG1Q9ULL1 1385 aa22.47■■□□□ 1.19
RAB40C-203ENST00000535977 ESPNB1AK53 854 aa22.46■■□□□ 1.19
RAB40C-203ENST00000535977 CFAP44Q96MT7 982 aa22.46■■□□□ 1.19
RAB40C-203ENST00000535977 ADAMTS13Q76LX8 1427 aa22.45■■□□□ 1.18
RAB40C-203ENST00000535977 PLEKHG3A1L390 1219 aa22.44■■□□□ 1.18
RAB40C-203ENST00000535977 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
RAB40C-203ENST00000535977 MRPL50Q8N5N7 158 aaKnown RBP22.44■■□□□ 1.18
RAB40C-203ENST00000535977 HAP1P54257 671 aaPredicted RBP22.44■■□□□ 1.18
RAB40C-203ENST00000535977 PTCH1Q13635 1447 aa22.43■■□□□ 1.18
RAB40C-203ENST00000535977 TPM2P07951 284 aa22.43■■□□□ 1.18
RAB40C-203ENST00000535977 ROBO2Q9HCK4 1378 aa22.43■■□□□ 1.18
RAB40C-203ENST00000535977 ZRANB1Q9UGI0 708 aa22.43■■□□□ 1.18
RAB40C-203ENST00000535977 PRR36Q9H6K5 1346 aa22.42■■□□□ 1.18
RAB40C-203ENST00000535977 RBM10P98175 930 aaKnown RBP22.42■■□□□ 1.18
RAB40C-203ENST00000535977 PRDM4Q9UKN5 801 aa22.42■■□□□ 1.18
RAB40C-203ENST00000535977 MRE11P49959 708 aa22.42■■□□□ 1.18
RAB40C-203ENST00000535977 MBIPQ9NS73 344 aa22.41■■□□□ 1.18
RAB40C-203ENST00000535977 TTC21BQ7Z4L5 1316 aa22.41■■□□□ 1.18
RAB40C-203ENST00000535977 MCM4P33991 863 aa22.4■■□□□ 1.18
RAB40C-203ENST00000535977 NUCB1Q02818 461 aa22.4■■□□□ 1.18
RAB40C-203ENST00000535977 NRKQ7Z2Y5 1582 aa22.4■■□□□ 1.18
RAB40C-203ENST00000535977 A0A0U1RQG5 324 aaPredicted RBP22.4■■□□□ 1.18
RAB40C-203ENST00000535977 CEBPAP49715 358 aaPredicted RBP22.4■■□□□ 1.18
RAB40C-203ENST00000535977 RRS1Q15050 365 aaKnown RBP22.4■■□□□ 1.18
RAB40C-203ENST00000535977 GCC1Q96CN9 775 aa22.39■■□□□ 1.18
RAB40C-203ENST00000535977 API5Q9BZZ5 524 aaKnown RBP22.39■■□□□ 1.18
RAB40C-203ENST00000535977 ZBTB7BO15156 539 aaPredicted RBP22.39■■□□□ 1.17
RAB40C-203ENST00000535977 TWISTNBQ3B726 338 aaPredicted RBP22.39■■□□□ 1.17
RAB40C-203ENST00000535977 EID1Q9Y6B2 187 aa22.39■■□□□ 1.17
RAB40C-203ENST00000535977 KIF24Q5T7B8 1368 aa22.39■■□□□ 1.17
RAB40C-203ENST00000535977 NCKAP5LQ9HCH0 1330 aa22.39■■□□□ 1.17
RAB40C-203ENST00000535977 TOPAZ1Q8N9V7 1692 aa22.38■■□□□ 1.17
RAB40C-203ENST00000535977 THUMPD2Q9BTF0 503 aaKnown RBP22.37■■□□□ 1.17
RAB40C-203ENST00000535977 ABCC4O15439 1325 aa22.37■■□□□ 1.17
RAB40C-203ENST00000535977 ACEP12821 1306 aa22.37■■□□□ 1.17
RAB40C-203ENST00000535977 DLG5Q8TDM6 1919 aa22.37■■□□□ 1.17
RAB40C-203ENST00000535977 KDM4FA0A1W2PPD8 638 aa22.36■■□□□ 1.17
RAB40C-203ENST00000535977 OVOS2A0A0J9YW53 1432 aa22.36■■□□□ 1.17
RAB40C-203ENST00000535977 OVOS2Q6IE36 1432 aa22.36■■□□□ 1.17
RAB40C-203ENST00000535977 TSPYL6Q8N831 410 aa22.36■■□□□ 1.17
RAB40C-203ENST00000535977 GRPEL1Q9HAV7 217 aa22.36■■□□□ 1.17
RAB40C-203ENST00000535977 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.35■■□□□ 1.17
RAB40C-203ENST00000535977 TRAK2O60296 914 aa22.35■■□□□ 1.17
RAB40C-203ENST00000535977 USP6P35125 1406 aa22.35■■□□□ 1.17
RAB40C-203ENST00000535977 CHD1LQ86WJ1 897 aa22.35■■□□□ 1.17
RAB40C-203ENST00000535977 TBC1D2Q9BYX2 928 aa22.35■■□□□ 1.17
RAB40C-203ENST00000535977 USP31Q70CQ4 1352 aa22.34■■□□□ 1.17
RAB40C-203ENST00000535977 EIF4A2Q14240 407 aaKnown RBP22.34■■□□□ 1.17
RAB40C-203ENST00000535977 TTC21AQ8NDW8 1320 aa22.34■■□□□ 1.17
RAB40C-203ENST00000535977 LTKP29376 864 aa22.34■■□□□ 1.17
RAB40C-203ENST00000535977 C22orf23Q9BZE7 217 aa22.33■■□□□ 1.17
RAB40C-203ENST00000535977 TBX22Q9Y458 520 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms