RNA–Protein interactions for RNA: ENST00000534640.1

AC090099.1-202, humanhuman

TSL 1 (best)

Gene AC090099.1, Length 2,074 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090099.1-202ENST00000534640 FLT4P35916 1363 aa12.55□□□□□ -0.4
AC090099.1-202ENST00000534640 IQSEC2Q5JU85 1478 aa12.55□□□□□ -0.4
AC090099.1-202ENST00000534640 SOX12O15370 315 aa12.54□□□□□ -0.4
AC090099.1-202ENST00000534640 TCP11L2Q8N4U5 519 aa12.54□□□□□ -0.4
AC090099.1-202ENST00000534640 KCNH5Q8NCM2 988 aa12.54□□□□□ -0.4
AC090099.1-202ENST00000534640 RBM19Q9Y4C8 960 aaKnown RBP12.54□□□□□ -0.4
AC090099.1-202ENST00000534640 LTBP4Q8N2S1 1624 aa12.54□□□□□ -0.4
AC090099.1-202ENST00000534640 NFAT5O94916 1531 aa12.53□□□□□ -0.4
AC090099.1-202ENST00000534640 HSP90AB2PQ58FF8 381 aa12.53□□□□□ -0.4
AC090099.1-202ENST00000534640 PXDNQ92626 1479 aa12.53□□□□□ -0.4
AC090099.1-202ENST00000534640 EIF4A2Q14240 407 aaKnown RBP12.53□□□□□ -0.4
AC090099.1-202ENST00000534640 LTN1O94822 1766 aa12.53□□□□□ -0.4
AC090099.1-202ENST00000534640 SLIT3O75094 1523 aa12.52□□□□□ -0.4
AC090099.1-202ENST00000534640 USP19O94966 1318 aa12.52□□□□□ -0.4
AC090099.1-202ENST00000534640 DDX17Q92841 729 aaKnown RBP12.52□□□□□ -0.4
AC090099.1-202ENST00000534640 RSPH6AQ9H0K4 717 aa12.52□□□□□ -0.4
AC090099.1-202ENST00000534640 FANCIQ9NVI1 1328 aa12.52□□□□□ -0.41
AC090099.1-202ENST00000534640 AMPHP49418 695 aa12.52□□□□□ -0.41
AC090099.1-202ENST00000534640 CCDC27Q2M243 656 aa12.52□□□□□ -0.41
AC090099.1-202ENST00000534640 PHRF1Q9P1Y6 1649 aaKnown RBP12.52□□□□□ -0.41
AC090099.1-202ENST00000534640 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
AC090099.1-202ENST00000534640 GCP02774 474 aa12.51□□□□□ -0.41
AC090099.1-202ENST00000534640 CDCA7LQ96GN5 454 aa12.51□□□□□ -0.41
AC090099.1-202ENST00000534640 RTL1A6NKG5 1358 aa12.51□□□□□ -0.41
AC090099.1-202ENST00000534640 HOXC9P31274 260 aa12.5□□□□□ -0.41
AC090099.1-202ENST00000534640 SOS2Q07890 1332 aaPredicted RBP12.5□□□□□ -0.41
AC090099.1-202ENST00000534640 SPATA31A3Q5VYP0 1347 aa12.5□□□□□ -0.41
AC090099.1-202ENST00000534640 GOLGA2Q08379 1002 aa12.5□□□□□ -0.41
AC090099.1-202ENST00000534640 LMOD2Q6P5Q4 547 aa12.5□□□□□ -0.41
AC090099.1-202ENST00000534640 WWC1Q8IX03 1113 aa12.5□□□□□ -0.41
AC090099.1-202ENST00000534640 TNS3Q68CZ2 1445 aa12.5□□□□□ -0.41
AC090099.1-202ENST00000534640 IP6K1Q92551 441 aa12.49□□□□□ -0.41
AC090099.1-202ENST00000534640 MAPK8IP3Q9UPT6 1336 aa12.49□□□□□ -0.41
AC090099.1-202ENST00000534640 HMOX1P09601 288 aa12.49□□□□□ -0.41
AC090099.1-202ENST00000534640 PRKAR2BP31323 418 aa12.49□□□□□ -0.41
AC090099.1-202ENST00000534640 TMPOP42166 694 aaKnown RBP12.49□□□□□ -0.41
AC090099.1-202ENST00000534640 ARHGEF25Q86VW2 580 aa12.49□□□□□ -0.41
AC090099.1-202ENST00000534640 MED1Q15648 1581 aaPredicted RBP12.49□□□□□ -0.41
AC090099.1-202ENST00000534640 TRMT2AQ8IZ69 625 aaKnown RBP12.48□□□□□ -0.41
AC090099.1-202ENST00000534640 RRP7AQ9Y3A4 280 aaKnown RBP12.48□□□□□ -0.41
AC090099.1-202ENST00000534640 ARHGEF10O15013 1369 aa12.48□□□□□ -0.41
AC090099.1-202ENST00000534640 SLFN5Q08AF3 891 aa12.47□□□□□ -0.41
AC090099.1-202ENST00000534640 FKBP8Q14318 412 aa12.47□□□□□ -0.41
AC090099.1-202ENST00000534640 NEUROD2Q15784 382 aa12.47□□□□□ -0.41
AC090099.1-202ENST00000534640 NHSL1Q5SYE7 1610 aa12.47□□□□□ -0.41
AC090099.1-202ENST00000534640 DUSP27Q5VZP5 1158 aa12.47□□□□□ -0.41
AC090099.1-202ENST00000534640 SULT6B1Q6IMI4 303 aa12.47□□□□□ -0.41
AC090099.1-202ENST00000534640 WDR63Q8IWG1 891 aa12.47□□□□□ -0.41
AC090099.1-202ENST00000534640 PHACTR3Q96KR7 559 aa12.47□□□□□ -0.41
AC090099.1-202ENST00000534640 CRYBG1Q9Y4K1 1723 aa12.46□□□□□ -0.41
AC090099.1-202ENST00000534640 NEFMP07197 916 aa12.46□□□□□ -0.41
AC090099.1-202ENST00000534640 KDRP35968 1356 aa12.46□□□□□ -0.41
AC090099.1-202ENST00000534640 IGSF1Q8N6C5 1336 aa12.46□□□□□ -0.42
AC090099.1-202ENST00000534640 E9PSI1 815 aa12.46□□□□□ -0.42
AC090099.1-202ENST00000534640 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.42
AC090099.1-202ENST00000534640 EYA1Q99502 592 aa12.46□□□□□ -0.42
AC090099.1-202ENST00000534640 AEBP1Q8IUX7 1158 aa12.45□□□□□ -0.42
AC090099.1-202ENST00000534640 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
AC090099.1-202ENST00000534640 TRIM35Q9UPQ4 493 aa12.45□□□□□ -0.42
AC090099.1-202ENST00000534640 RIPK4P57078 832 aa12.44□□□□□ -0.42
AC090099.1-202ENST00000534640 NEFLP07196 543 aa12.44□□□□□ -0.42
AC090099.1-202ENST00000534640 NFE2L2Q16236 605 aa12.44□□□□□ -0.42
AC090099.1-202ENST00000534640 RNF123Q5XPI4 1314 aa12.43□□□□□ -0.42
AC090099.1-202ENST00000534640 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
AC090099.1-202ENST00000534640 ERICH6BQ5W0A0 696 aa12.43□□□□□ -0.42
AC090099.1-202ENST00000534640 ROBO1Q9Y6N7 1651 aa12.43□□□□□ -0.42
AC090099.1-202ENST00000534640 CABLES1Q8TDN4 633 aa12.42□□□□□ -0.42
AC090099.1-202ENST00000534640 COL18A1P39060 1754 aa12.42□□□□□ -0.42
AC090099.1-202ENST00000534640 RGPD5Q99666 1765 aa12.42□□□□□ -0.42
AC090099.1-202ENST00000534640 CPDO75976 1380 aa12.42□□□□□ -0.42
AC090099.1-202ENST00000534640 ZC3H6P61129 1189 aaKnown RBP12.41□□□□□ -0.42
AC090099.1-202ENST00000534640 RCAN3Q9UKA8 241 aa12.41□□□□□ -0.42
AC090099.1-202ENST00000534640 AXIN2Q9Y2T1 843 aa12.41□□□□□ -0.42
AC090099.1-202ENST00000534640 ABCC6O95255 1503 aa12.41□□□□□ -0.42
AC090099.1-202ENST00000534640 IL16Q14005 1332 aa12.41□□□□□ -0.42
AC090099.1-202ENST00000534640 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
AC090099.1-202ENST00000534640 LTV1Q96GA3 475 aaPredicted RBP12.41□□□□□ -0.42
AC090099.1-202ENST00000534640 AHDC1Q5TGY3 1603 aaPredicted RBP12.4□□□□□ -0.42
AC090099.1-202ENST00000534640 RGPD2P0DJD1 1756 aa12.4□□□□□ -0.42
AC090099.1-202ENST00000534640 ZBTB7CA1YPR0 619 aa12.39□□□□□ -0.43
AC090099.1-202ENST00000534640 NBPF6Q5VWK0 638 aa12.39□□□□□ -0.43
AC090099.1-202ENST00000534640 NBPF4Q96M43 638 aa12.39□□□□□ -0.43
AC090099.1-202ENST00000534640 PODXL2Q9NZ53 605 aa12.39□□□□□ -0.43
AC090099.1-202ENST00000534640 MSH5O43196 834 aa12.39□□□□□ -0.43
AC090099.1-202ENST00000534640 LMOD3Q0VAK6 560 aa12.39□□□□□ -0.43
AC090099.1-202ENST00000534640 NCAPD2Q15021 1401 aa12.39□□□□□ -0.43
AC090099.1-202ENST00000534640 ANKRD24Q8TF21 1146 aa12.38□□□□□ -0.43
AC090099.1-202ENST00000534640 LRRC59Q96AG4 307 aaKnown RBP12.38□□□□□ -0.43
AC090099.1-202ENST00000534640 MYH16Q9H6N6 1097 aa12.38□□□□□ -0.43
AC090099.1-202ENST00000534640 ABCA3Q99758 1704 aa12.38□□□□□ -0.43
AC090099.1-202ENST00000534640 CAMTA1Q9Y6Y1 1673 aa12.38□□□□□ -0.43
AC090099.1-202ENST00000534640 KIAA0232Q92628 1395 aa12.38□□□□□ -0.43
AC090099.1-202ENST00000534640 ERBB3P21860 1342 aa12.38□□□□□ -0.43
AC090099.1-202ENST00000534640 TOM1O60784 492 aa12.38□□□□□ -0.43
AC090099.1-202ENST00000534640 CALD1Q05682 793 aaKnown RBP12.37□□□□□ -0.43
AC090099.1-202ENST00000534640 MTHFSDQ2M296 383 aaKnown RBP12.36□□□□□ -0.43
AC090099.1-202ENST00000534640 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
AC090099.1-202ENST00000534640 LMO7Q8WWI1 1683 aa12.36□□□□□ -0.43
AC090099.1-202ENST00000534640 VSIG10Q8N0Z9 540 aa12.36□□□□□ -0.43
AC090099.1-202ENST00000534640 GAS2L2Q8NHY3 880 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms