RNA–Protein interactions for RNA: ENST00000534484.1

LMO1-204, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LMO1, Length 770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-204ENST00000534484 RIPK4P57078 832 aa17.56■□□□□ 0.4
LMO1-204ENST00000534484 XIRP1Q702N8 1843 aaKnown RBP17.56■□□□□ 0.4
LMO1-204ENST00000534484 LTN1O94822 1766 aa17.56■□□□□ 0.4
LMO1-204ENST00000534484 NLRP6P59044 892 aa17.55■□□□□ 0.4
LMO1-204ENST00000534484 EXOC6Q8TAG9 804 aa17.55■□□□□ 0.4
LMO1-204ENST00000534484 SLIT3O75094 1523 aa17.55■□□□□ 0.4
LMO1-204ENST00000534484 KDRP35968 1356 aa17.54■□□□□ 0.4
LMO1-204ENST00000534484 B4GALNT3Q6L9W6 998 aa17.54■□□□□ 0.4
LMO1-204ENST00000534484 PHACTR3Q96KR7 559 aa17.54■□□□□ 0.4
LMO1-204ENST00000534484 HMOX1P09601 288 aa17.53■□□□□ 0.4
LMO1-204ENST00000534484 HSP90AB2PQ58FF8 381 aa17.53■□□□□ 0.4
LMO1-204ENST00000534484 RBM33Q96EV2 1170 aaKnown RBP17.53■□□□□ 0.4
LMO1-204ENST00000534484 FANCIQ9NVI1 1328 aa17.52■□□□□ 0.4
LMO1-204ENST00000534484 ALS2Q96Q42 1657 aa17.52■□□□□ 0.4
LMO1-204ENST00000534484 PLIN1O60240 522 aa17.52■□□□□ 0.4
LMO1-204ENST00000534484 CALD1Q05682 793 aaKnown RBP17.52■□□□□ 0.4
LMO1-204ENST00000534484 LMOD3Q0VAK6 560 aa17.52■□□□□ 0.4
LMO1-204ENST00000534484 ESCO1Q5FWF5 840 aa17.52■□□□□ 0.4
LMO1-204ENST00000534484 ABTB2Q8N961 1025 aa17.52■□□□□ 0.4
LMO1-204ENST00000534484 TMEM94Q12767 1356 aa17.52■□□□□ 0.39
LMO1-204ENST00000534484 IGSF1Q8N6C5 1336 aa17.51■□□□□ 0.39
LMO1-204ENST00000534484 RARSP54136 660 aaKnown RBP17.51■□□□□ 0.39
LMO1-204ENST00000534484 PDE3AQ14432 1141 aa17.51■□□□□ 0.39
LMO1-204ENST00000534484 C14orf37Q86TY3 774 aa17.51■□□□□ 0.39
LMO1-204ENST00000534484 CCDC136Q96JN2 1154 aa17.51■□□□□ 0.39
LMO1-204ENST00000534484 CRBNQ96SW2 442 aa17.5■□□□□ 0.39
LMO1-204ENST00000534484 BCAR3O75815 825 aa17.49■□□□□ 0.39
LMO1-204ENST00000534484 PSME1Q06323 249 aa17.49■□□□□ 0.39
LMO1-204ENST00000534484 ORAI2Q96SN7 254 aa17.49■□□□□ 0.39
LMO1-204ENST00000534484 USP19O94966 1318 aa17.48■□□□□ 0.39
LMO1-204ENST00000534484 ZNF853P0CG23 659 aa17.48■□□□□ 0.39
LMO1-204ENST00000534484 HOXC9P31274 260 aa17.48■□□□□ 0.39
LMO1-204ENST00000534484 AMPHP49418 695 aa17.48■□□□□ 0.39
LMO1-204ENST00000534484 HSPA2P54652 639 aa17.48■□□□□ 0.39
LMO1-204ENST00000534484 C20orf194Q5TEA3 1177 aa17.48■□□□□ 0.39
LMO1-204ENST00000534484 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
LMO1-204ENST00000534484 SULT6B1Q6IMI4 303 aa17.47■□□□□ 0.39
LMO1-204ENST00000534484 PAK3O75914 559 aaPredicted RBP17.46■□□□□ 0.39
LMO1-204ENST00000534484 AEBP1Q8IUX7 1158 aa17.46■□□□□ 0.39
LMO1-204ENST00000534484 ZNF428Q96B54 188 aa17.46■□□□□ 0.39
LMO1-204ENST00000534484 TSHZ2Q9NRE2 1034 aa17.46■□□□□ 0.39
LMO1-204ENST00000534484 IFT57Q9NWB7 429 aa17.46■□□□□ 0.39
LMO1-204ENST00000534484 CADPS2Q86UW7 1296 aa17.45■□□□□ 0.38
LMO1-204ENST00000534484 IP6K1Q92551 441 aa17.45■□□□□ 0.38
LMO1-204ENST00000534484 ATF3P18847 181 aa17.44■□□□□ 0.38
LMO1-204ENST00000534484 GNAI1P63096 354 aa17.44■□□□□ 0.38
LMO1-204ENST00000534484 EXOSC9Q06265 439 aaKnown RBP17.44■□□□□ 0.38
LMO1-204ENST00000534484 EYA1Q99502 592 aa17.44■□□□□ 0.38
LMO1-204ENST00000534484 CAMTA1Q9Y6Y1 1673 aa17.44■□□□□ 0.38
LMO1-204ENST00000534484 FOXO3O43524 673 aa17.43■□□□□ 0.38
LMO1-204ENST00000534484 BRPF1P55201 1214 aaPredicted RBP17.43■□□□□ 0.38
LMO1-204ENST00000534484 AAMPQ13685 434 aa17.43■□□□□ 0.38
LMO1-204ENST00000534484 KRT28Q7Z3Y7 464 aa17.43■□□□□ 0.38
LMO1-204ENST00000534484 TSR2Q969E8 191 aaKnown RBP17.43■□□□□ 0.38
LMO1-204ENST00000534484 NCAPD2Q15021 1401 aa17.43■□□□□ 0.38
LMO1-204ENST00000534484 LRRC37A3O60309 1634 aa17.43■□□□□ 0.38
LMO1-204ENST00000534484 MSH6P52701 1360 aa17.42■□□□□ 0.38
LMO1-204ENST00000534484 CRYBG1Q9Y4K1 1723 aa17.42■□□□□ 0.38
LMO1-204ENST00000534484 NUTM2GQ5VZR2 741 aa17.42■□□□□ 0.38
LMO1-204ENST00000534484 CFAP44Q96MT7 982 aa17.42■□□□□ 0.38
LMO1-204ENST00000534484 SOX12O15370 315 aa17.41■□□□□ 0.38
LMO1-204ENST00000534484 ALDH1L2Q3SY69 923 aa17.41■□□□□ 0.38
LMO1-204ENST00000534484 ABCC6O95255 1503 aa17.41■□□□□ 0.38
LMO1-204ENST00000534484 PXDNQ92626 1479 aa17.4■□□□□ 0.38
LMO1-204ENST00000534484 ARHGEF25Q86VW2 580 aa17.4■□□□□ 0.38
LMO1-204ENST00000534484 MED1Q15648 1581 aaPredicted RBP17.4■□□□□ 0.38
LMO1-204ENST00000534484 HTATSF1O43719 755 aaKnown RBP17.39■□□□□ 0.37
LMO1-204ENST00000534484 GCP02774 474 aa17.38■□□□□ 0.37
LMO1-204ENST00000534484 MS4A1P11836 297 aa17.38■□□□□ 0.37
LMO1-204ENST00000534484 NPHP3Q7Z494 1330 aa17.38■□□□□ 0.37
LMO1-204ENST00000534484 KDM2BQ8NHM5 1336 aa17.38■□□□□ 0.37
LMO1-204ENST00000534484 CRB1P82279 1406 aa17.38■□□□□ 0.37
LMO1-204ENST00000534484 LMO7Q8WWI1 1683 aa17.37■□□□□ 0.37
LMO1-204ENST00000534484 GAS2L2Q8NHY3 880 aa17.37■□□□□ 0.37
LMO1-204ENST00000534484 RGPD2P0DJD1 1756 aa17.37■□□□□ 0.37
LMO1-204ENST00000534484 COL18A1P39060 1754 aa17.36■□□□□ 0.37
LMO1-204ENST00000534484 CHL1O00533 1208 aa17.36■□□□□ 0.37
LMO1-204ENST00000534484 SSH1Q8WYL5 1049 aa17.36■□□□□ 0.37
LMO1-204ENST00000534484 THUMPD2Q9BTF0 503 aaKnown RBP17.36■□□□□ 0.37
LMO1-204ENST00000534484 MBIPQ9NS73 344 aa17.36■□□□□ 0.37
LMO1-204ENST00000534484 TNS3Q68CZ2 1445 aa17.36■□□□□ 0.37
LMO1-204ENST00000534484 VAMP4O75379 141 aa17.35■□□□□ 0.37
LMO1-204ENST00000534484 MTHFSDQ2M296 383 aaKnown RBP17.35■□□□□ 0.37
LMO1-204ENST00000534484 ZKSCAN2Q63HK3 967 aa17.35■□□□□ 0.37
LMO1-204ENST00000534484 KIF16BQ96L93 1317 aa17.35■□□□□ 0.37
LMO1-204ENST00000534484 KIAA0232Q92628 1395 aa17.35■□□□□ 0.37
LMO1-204ENST00000534484 FAM83GA6ND36 823 aa17.34■□□□□ 0.37
LMO1-204ENST00000534484 RGPD5Q99666 1765 aa17.33■□□□□ 0.37
LMO1-204ENST00000534484 FAM208AQ9UK61 1670 aaKnown RBP17.33■□□□□ 0.37
LMO1-204ENST00000534484 CANXP27824 592 aaKnown RBP17.33■□□□□ 0.36
LMO1-204ENST00000534484 CENPQQ7L2Z9 268 aaPredicted RBP17.33■□□□□ 0.36
LMO1-204ENST00000534484 SMC4Q9NTJ3 1288 aa17.33■□□□□ 0.36
LMO1-204ENST00000534484 PLEKHG2Q9H7P9 1386 aa17.32■□□□□ 0.36
LMO1-204ENST00000534484 XPCQ01831 940 aaPredicted RBP17.32■□□□□ 0.36
LMO1-204ENST00000534484 PANK1Q8TE04 598 aa17.32■□□□□ 0.36
LMO1-204ENST00000534484 FRAT1Q92837 279 aaPredicted RBP17.32■□□□□ 0.36
LMO1-204ENST00000534484 SPATA31A3Q5VYP0 1347 aa17.31■□□□□ 0.36
LMO1-204ENST00000534484 ZNF335Q9H4Z2 1342 aaPredicted RBP17.31■□□□□ 0.36
LMO1-204ENST00000534484 RLBP1P12271 317 aa17.31■□□□□ 0.36
LMO1-204ENST00000534484 DCTN1Q14203 1278 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms