RNA–Protein interactions for RNA: ENST00000534159.5

CHRDL2-208, Transcript of chordin like 2, humanhuman

TSL 2

Gene CHRDL2, Length 1,971 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-208ENST00000534159 SLFN5Q08AF3 891 aa18.44■□□□□ 0.54
CHRDL2-208ENST00000534159 TMPOP42166 694 aaKnown RBP18.43■□□□□ 0.54
CHRDL2-208ENST00000534159 HOXC9P31274 260 aa18.42■□□□□ 0.54
CHRDL2-208ENST00000534159 IRX6P78412 446 aaPredicted RBP18.42■□□□□ 0.54
CHRDL2-208ENST00000534159 CCDC27Q2M243 656 aa18.42■□□□□ 0.54
CHRDL2-208ENST00000534159 BRINP3Q76B58 766 aa18.42■□□□□ 0.54
CHRDL2-208ENST00000534159 E9PSI1 815 aa18.41■□□□□ 0.54
CHRDL2-208ENST00000534159 RIPK4P57078 832 aa18.41■□□□□ 0.54
CHRDL2-208ENST00000534159 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
CHRDL2-208ENST00000534159 LTN1O94822 1766 aa18.41■□□□□ 0.54
CHRDL2-208ENST00000534159 KIF24Q5T7B8 1368 aa18.41■□□□□ 0.54
CHRDL2-208ENST00000534159 DUSP27Q5VZP5 1158 aa18.41■□□□□ 0.54
CHRDL2-208ENST00000534159 SULT6B1Q6IMI4 303 aa18.41■□□□□ 0.54
CHRDL2-208ENST00000534159 SPINK5Q9NQ38 1064 aaPredicted RBP18.41■□□□□ 0.54
CHRDL2-208ENST00000534159 RCAN3Q9UKA8 241 aa18.41■□□□□ 0.54
CHRDL2-208ENST00000534159 NFAT5O94916 1531 aa18.4■□□□□ 0.54
CHRDL2-208ENST00000534159 GCP02774 474 aa18.4■□□□□ 0.54
CHRDL2-208ENST00000534159 WDR63Q8IWG1 891 aa18.4■□□□□ 0.54
CHRDL2-208ENST00000534159 PHACTR3Q96KR7 559 aa18.4■□□□□ 0.54
CHRDL2-208ENST00000534159 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
CHRDL2-208ENST00000534159 AEBP1Q8IUX7 1158 aa18.39■□□□□ 0.53
CHRDL2-208ENST00000534159 LTV1Q96GA3 475 aaPredicted RBP18.39■□□□□ 0.53
CHRDL2-208ENST00000534159 ALS2Q96Q42 1657 aa18.39■□□□□ 0.53
CHRDL2-208ENST00000534159 RTL1A6NKG5 1358 aa18.38■□□□□ 0.53
CHRDL2-208ENST00000534159 USP19O94966 1318 aa18.38■□□□□ 0.53
CHRDL2-208ENST00000534159 TRMT2AQ8IZ69 625 aaKnown RBP18.37■□□□□ 0.53
CHRDL2-208ENST00000534159 IP6K1Q92551 441 aa18.37■□□□□ 0.53
CHRDL2-208ENST00000534159 SLIT3O75094 1523 aa18.37■□□□□ 0.53
CHRDL2-208ENST00000534159 NFE2L2Q16236 605 aa18.37■□□□□ 0.53
CHRDL2-208ENST00000534159 TRIM35Q9UPQ4 493 aa18.37■□□□□ 0.53
CHRDL2-208ENST00000534159 PXDNQ92626 1479 aa18.36■□□□□ 0.53
CHRDL2-208ENST00000534159 ARHGEF10O15013 1369 aa18.36■□□□□ 0.53
CHRDL2-208ENST00000534159 TNS3Q68CZ2 1445 aa18.36■□□□□ 0.53
CHRDL2-208ENST00000534159 RGPD1P0DJD0 1748 aa18.36■□□□□ 0.53
CHRDL2-208ENST00000534159 EYA1Q99502 592 aa18.35■□□□□ 0.53
CHRDL2-208ENST00000534159 SPATA31A3Q5VYP0 1347 aa18.34■□□□□ 0.53
CHRDL2-208ENST00000534159 ARHGEF25Q86VW2 580 aa18.33■□□□□ 0.53
CHRDL2-208ENST00000534159 MYH16Q9H6N6 1097 aa18.33■□□□□ 0.52
CHRDL2-208ENST00000534159 RNF123Q5XPI4 1314 aa18.33■□□□□ 0.52
CHRDL2-208ENST00000534159 MED1Q15648 1581 aaPredicted RBP18.32■□□□□ 0.52
CHRDL2-208ENST00000534159 ZC3H6P61129 1189 aaKnown RBP18.32■□□□□ 0.52
CHRDL2-208ENST00000534159 IGSF1Q8N6C5 1336 aa18.32■□□□□ 0.52
CHRDL2-208ENST00000534159 CABLES1Q8TDN4 633 aa18.31■□□□□ 0.52
CHRDL2-208ENST00000534159 RRP1P56182 461 aaKnown RBP18.3■□□□□ 0.52
CHRDL2-208ENST00000534159 PHRF1Q9P1Y6 1649 aaKnown RBP18.3■□□□□ 0.52
CHRDL2-208ENST00000534159 LTBP4Q8N2S1 1624 aa18.3■□□□□ 0.52
CHRDL2-208ENST00000534159 LMOD3Q0VAK6 560 aa18.3■□□□□ 0.52
CHRDL2-208ENST00000534159 SOS2Q07890 1332 aaPredicted RBP18.29■□□□□ 0.52
CHRDL2-208ENST00000534159 DLG5Q8TDM6 1919 aa18.29■□□□□ 0.52
CHRDL2-208ENST00000534159 USHBP1Q8N6Y0 703 aa18.28■□□□□ 0.52
CHRDL2-208ENST00000534159 IL16Q14005 1332 aa18.28■□□□□ 0.52
CHRDL2-208ENST00000534159 KDRP35968 1356 aa18.28■□□□□ 0.52
CHRDL2-208ENST00000534159 CALD1Q05682 793 aaKnown RBP18.27■□□□□ 0.52
CHRDL2-208ENST00000534159 THUMPD2Q9BTF0 503 aaKnown RBP18.27■□□□□ 0.52
CHRDL2-208ENST00000534159 LAS1LQ9Y4W2 734 aaKnown RBP18.27■□□□□ 0.52
CHRDL2-208ENST00000534159 ERICH6BQ5W0A0 696 aa18.26■□□□□ 0.51
CHRDL2-208ENST00000534159 ANKRD24Q8TF21 1146 aa18.26■□□□□ 0.51
CHRDL2-208ENST00000534159 TSR2Q969E8 191 aaKnown RBP18.26■□□□□ 0.51
CHRDL2-208ENST00000534159 NBPF6Q5VWK0 638 aa18.26■□□□□ 0.51
CHRDL2-208ENST00000534159 NBPF4Q96M43 638 aa18.26■□□□□ 0.51
CHRDL2-208ENST00000534159 AXIN2Q9Y2T1 843 aa18.26■□□□□ 0.51
CHRDL2-208ENST00000534159 FANCIQ9NVI1 1328 aa18.25■□□□□ 0.51
CHRDL2-208ENST00000534159 HAP1P54257 671 aaPredicted RBP18.25■□□□□ 0.51
CHRDL2-208ENST00000534159 LRRC59Q96AG4 307 aaKnown RBP18.25■□□□□ 0.51
CHRDL2-208ENST00000534159 NHSL1Q5SYE7 1610 aa18.25■□□□□ 0.51
CHRDL2-208ENST00000534159 FAM83GA6ND36 823 aa18.24■□□□□ 0.51
CHRDL2-208ENST00000534159 PLIN1O60240 522 aa18.24■□□□□ 0.51
CHRDL2-208ENST00000534159 RGPD2P0DJD1 1756 aa18.24■□□□□ 0.51
CHRDL2-208ENST00000534159 RGPD5Q99666 1765 aa18.24■□□□□ 0.51
CHRDL2-208ENST00000534159 MTHFSDQ2M296 383 aaKnown RBP18.24■□□□□ 0.51
CHRDL2-208ENST00000534159 AEBP2Q6ZN18 517 aaPredicted RBP18.24■□□□□ 0.51
CHRDL2-208ENST00000534159 DCTN1Q14203 1278 aa18.23■□□□□ 0.51
CHRDL2-208ENST00000534159 GAS2L2Q8NHY3 880 aa18.23■□□□□ 0.51
CHRDL2-208ENST00000534159 CRYBG1Q9Y4K1 1723 aa18.23■□□□□ 0.51
CHRDL2-208ENST00000534159 CHRNA2Q15822 529 aa18.22■□□□□ 0.51
CHRDL2-208ENST00000534159 EXOSC9Q06265 439 aaKnown RBP18.22■□□□□ 0.51
CHRDL2-208ENST00000534159 ROBO1Q9Y6N7 1651 aa18.22■□□□□ 0.51
CHRDL2-208ENST00000534159 GNAI1P63096 354 aa18.21■□□□□ 0.51
CHRDL2-208ENST00000534159 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.21■□□□□ 0.51
CHRDL2-208ENST00000534159 KIAA0232Q92628 1395 aa18.21■□□□□ 0.51
CHRDL2-208ENST00000534159 RTF1Q92541 710 aaKnown RBP18.21■□□□□ 0.5
CHRDL2-208ENST00000534159 IFT57Q9NWB7 429 aa18.21■□□□□ 0.5
CHRDL2-208ENST00000534159 BCAR3O75815 825 aa18.2■□□□□ 0.5
CHRDL2-208ENST00000534159 MCM10Q7L590 875 aa18.2■□□□□ 0.5
CHRDL2-208ENST00000534159 PPP4R2Q9NY27 417 aa18.2■□□□□ 0.5
CHRDL2-208ENST00000534159 CSB-PGBD3P0DP91 1061 aa18.19■□□□□ 0.5
CHRDL2-208ENST00000534159 CPDO75976 1380 aa18.19■□□□□ 0.5
CHRDL2-208ENST00000534159 ERBB3P21860 1342 aa18.18■□□□□ 0.5
CHRDL2-208ENST00000534159 PRDM11Q9NQV5 511 aa18.18■□□□□ 0.5
CHRDL2-208ENST00000534159 NLRP2Q9NX02 1062 aa18.18■□□□□ 0.5
CHRDL2-208ENST00000534159 COL18A1P39060 1754 aa18.18■□□□□ 0.5
CHRDL2-208ENST00000534159 CFAP44Q96MT7 982 aa18.17■□□□□ 0.5
CHRDL2-208ENST00000534159 CT47B1P0C2W7 299 aaPredicted RBP18.17■□□□□ 0.5
CHRDL2-208ENST00000534159 RARSP54136 660 aaKnown RBP18.17■□□□□ 0.5
CHRDL2-208ENST00000534159 GNAT3A8MTJ3 354 aa18.16■□□□□ 0.5
CHRDL2-208ENST00000534159 ZNF853P0CG23 659 aa18.16■□□□□ 0.5
CHRDL2-208ENST00000534159 MYT1Q01538 1121 aa18.16■□□□□ 0.5
CHRDL2-208ENST00000534159 MBIPQ9NS73 344 aa18.16■□□□□ 0.5
CHRDL2-208ENST00000534159 CANXP27824 592 aaKnown RBP18.15■□□□□ 0.5
CHRDL2-208ENST00000534159 HTATSF1O43719 755 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms