RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 VWDEQ8N2E2 1590 aa11.38□□□□□ -0.59
CASP4-212ENST00000533730 SETD1BQ9UPS6 1966 aaKnown RBP11.38□□□□□ -0.59
CASP4-212ENST00000533730 ARHGAP31Q2M1Z3 1444 aa11.38□□□□□ -0.59
CASP4-212ENST00000533730 TTLL12Q14166 644 aaPredicted RBP11.38□□□□□ -0.59
CASP4-212ENST00000533730 NUDT18Q6ZVK8 323 aa11.38□□□□□ -0.59
CASP4-212ENST00000533730 CLUAP1Q96AJ1 413 aa11.38□□□□□ -0.59
CASP4-212ENST00000533730 GOPCQ9HD26 462 aa11.38□□□□□ -0.59
CASP4-212ENST00000533730 LMTK2Q8IWU2 1503 aa11.38□□□□□ -0.59
CASP4-212ENST00000533730 UHRF1BP1Q6BDS2 1440 aa11.37□□□□□ -0.59
CASP4-212ENST00000533730 NBPF26B4DH59 902 aa11.37□□□□□ -0.59
CASP4-212ENST00000533730 PXYLP1Q8TE99 480 aa11.37□□□□□ -0.59
CASP4-212ENST00000533730 PNMA3Q9UL41 463 aa11.37□□□□□ -0.59
CASP4-212ENST00000533730 CAMSAP1Q5T5Y3 1602 aa11.37□□□□□ -0.59
CASP4-212ENST00000533730 PREX1Q8TCU6 1659 aa11.36□□□□□ -0.59
CASP4-212ENST00000533730 CEP152O94986 1710 aa11.36□□□□□ -0.59
CASP4-212ENST00000533730 A6NJR5 290 aa11.36□□□□□ -0.59
CASP4-212ENST00000533730 CCDC82Q8N4S0 544 aa11.36□□□□□ -0.59
CASP4-212ENST00000533730 SMAPO00193 183 aa11.35□□□□□ -0.59
CASP4-212ENST00000533730 TRAK2O60296 914 aa11.35□□□□□ -0.59
CASP4-212ENST00000533730 OATP04181 439 aa11.35□□□□□ -0.59
CASP4-212ENST00000533730 PDIA4P13667 645 aaKnown RBP11.35□□□□□ -0.59
CASP4-212ENST00000533730 METTL3Q86U44 580 aaKnown RBP11.35□□□□□ -0.59
CASP4-212ENST00000533730 LAPTM4BQ86VI4 370 aa11.35□□□□□ -0.59
CASP4-212ENST00000533730 PHOX2BQ99453 314 aa11.35□□□□□ -0.59
CASP4-212ENST00000533730 NBPF3Q9H094 633 aa11.35□□□□□ -0.59
CASP4-212ENST00000533730 SEPT9Q9UHD8 586 aaPredicted RBP11.35□□□□□ -0.59
CASP4-212ENST00000533730 RPRD2Q5VT52 1461 aaKnown RBP11.34□□□□□ -0.59
CASP4-212ENST00000533730 LMTK3Q96Q04 1460 aa11.34□□□□□ -0.59
CASP4-212ENST00000533730 TNRQ92752 1358 aa11.34□□□□□ -0.59
CASP4-212ENST00000533730 EFCAB6Q5THR3 1501 aa11.34□□□□□ -0.59
CASP4-212ENST00000533730 NUP155O75694 1391 aa11.33□□□□□ -0.6
CASP4-212ENST00000533730 GIGYF2Q6Y7W6 1299 aaKnown RBP11.33□□□□□ -0.6
CASP4-212ENST00000533730 RBM46Q8TBY0 533 aaKnown RBP11.33□□□□□ -0.6
CASP4-212ENST00000533730 PCMTD1Q96MG8 357 aaPredicted RBP11.33□□□□□ -0.6
CASP4-212ENST00000533730 IQGAP3Q86VI3 1631 aa11.33□□□□□ -0.6
CASP4-212ENST00000533730 TET3O43151 1660 aa11.33□□□□□ -0.6
CASP4-212ENST00000533730 SPATA31D1Q6ZQQ2 1576 aa11.33□□□□□ -0.6
CASP4-212ENST00000533730 ERVK-7P63135 1459 aa11.32□□□□□ -0.6
CASP4-212ENST00000533730 MS4A1P11836 297 aa11.32□□□□□ -0.6
CASP4-212ENST00000533730 FAM98CQ17RN3 349 aaKnown RBP11.32□□□□□ -0.6
CASP4-212ENST00000533730 NLRP1Q9C000 1473 aa11.32□□□□□ -0.6
CASP4-212ENST00000533730 FBXO31Q5XUX0 539 aaPredicted RBP11.31□□□□□ -0.6
CASP4-212ENST00000533730 MRPL50Q8N5N7 158 aaKnown RBP11.31□□□□□ -0.6
CASP4-212ENST00000533730 SETD5Q9C0A6 1442 aa11.31□□□□□ -0.6
CASP4-212ENST00000533730 MYO3AQ8NEV4 1616 aa11.31□□□□□ -0.6
CASP4-212ENST00000533730 ZNF142P52746 1687 aaPredicted RBP11.3□□□□□ -0.6
CASP4-212ENST00000533730 ZBTB7CA1YPR0 619 aa11.3□□□□□ -0.6
CASP4-212ENST00000533730 SPNS2Q8IVW8 549 aa11.3□□□□□ -0.6
CASP4-212ENST00000533730 A2ML1A8K2U0 1454 aa11.3□□□□□ -0.6
CASP4-212ENST00000533730 CEP170BQ9Y4F5 1589 aaPredicted RBP11.29□□□□□ -0.6
CASP4-212ENST00000533730 RCCD1A6NED2 376 aa11.29□□□□□ -0.6
CASP4-212ENST00000533730 TRIM52Q96A61 297 aa11.29□□□□□ -0.6
CASP4-212ENST00000533730 NOS1P29475 1434 aa11.28□□□□□ -0.6
CASP4-212ENST00000533730 MCM6Q14566 821 aa11.28□□□□□ -0.6
CASP4-212ENST00000533730 ZFRQ96KR1 1074 aaKnown RBP11.28□□□□□ -0.6
CASP4-212ENST00000533730 REPIN1Q9BWE0 567 aaKnown RBP11.28□□□□□ -0.6
CASP4-212ENST00000533730 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.27□□□□□ -0.61
CASP4-212ENST00000533730 NECTIN2Q92692 538 aa11.27□□□□□ -0.61
CASP4-212ENST00000533730 DNAJB2P25686 324 aa11.26□□□□□ -0.61
CASP4-212ENST00000533730 HSPA2P54652 639 aa11.26□□□□□ -0.61
CASP4-212ENST00000533730 TMEM134Q9H6X4 195 aa11.26□□□□□ -0.61
CASP4-212ENST00000533730 SLC52A1Q9NWF4 448 aa11.26□□□□□ -0.61
CASP4-212ENST00000533730 PLA2R1Q13018 1463 aa11.25□□□□□ -0.61
CASP4-212ENST00000533730 UGGT1Q9NYU2 1555 aa11.25□□□□□ -0.61
CASP4-212ENST00000533730 E9PCH4 1651 aa11.25□□□□□ -0.61
CASP4-212ENST00000533730 THEMISQ8N1K5 641 aaPredicted RBP11.25□□□□□ -0.61
CASP4-212ENST00000533730 NLRP7Q8WX94 980 aa11.25□□□□□ -0.61
CASP4-212ENST00000533730 STAC3Q96MF2 364 aa11.25□□□□□ -0.61
CASP4-212ENST00000533730 TMUB1Q9BVT8 246 aa11.25□□□□□ -0.61
CASP4-212ENST00000533730 RAB3GAP2Q9H2M9 1393 aa11.25□□□□□ -0.61
CASP4-212ENST00000533730 SH3D19Q5HYK7 790 aa11.24□□□□□ -0.61
CASP4-212ENST00000533730 SYNMO15061 1565 aa11.24□□□□□ -0.61
CASP4-212ENST00000533730 CFAP65Q6ZU64 1925 aaKnown RBP11.23□□□□□ -0.61
CASP4-212ENST00000533730 CCDC9Q9Y3X0 531 aaKnown RBP11.23□□□□□ -0.61
CASP4-212ENST00000533730 KDM5AP29375 1690 aaKnown RBP11.23□□□□□ -0.61
CASP4-212ENST00000533730 PTPRTO14522 1441 aa11.22□□□□□ -0.61
CASP4-212ENST00000533730 SAMD7Q7Z3H4 446 aa11.22□□□□□ -0.61
CASP4-212ENST00000533730 IDI1Q13907 227 aa11.21□□□□□ -0.61
CASP4-212ENST00000533730 SWT1Q5T5J6 900 aaKnown RBP11.21□□□□□ -0.61
CASP4-212ENST00000533730 PROSER2Q86WR7 435 aaPredicted RBP11.21□□□□□ -0.61
CASP4-212ENST00000533730 SPHKAPQ2M3C7 1700 aa11.21□□□□□ -0.62
CASP4-212ENST00000533730 PIK3C2BO00750 1634 aa11.2□□□□□ -0.62
CASP4-212ENST00000533730 ADGRB3O60242 1522 aa11.2□□□□□ -0.62
CASP4-212ENST00000533730 WNT2BQ93097 391 aa11.2□□□□□ -0.62
CASP4-212ENST00000533730 MPHOSPH9Q99550 1183 aa11.2□□□□□ -0.62
CASP4-212ENST00000533730 UBR1Q8IWV7 1749 aa11.2□□□□□ -0.62
CASP4-212ENST00000533730 TRPM2O94759 1503 aa11.19□□□□□ -0.62
CASP4-212ENST00000533730 SOWAHBA6NEL2 793 aa11.19□□□□□ -0.62
CASP4-212ENST00000533730 GOLGA8CPA6NN73 597 aa11.19□□□□□ -0.62
CASP4-212ENST00000533730 MDM2Q00987 491 aaPredicted RBP11.19□□□□□ -0.62
CASP4-212ENST00000533730 ANKLE2Q86XL3 938 aa11.19□□□□□ -0.62
CASP4-212ENST00000533730 POM121Q96HA1 1249 aa11.19□□□□□ -0.62
CASP4-212ENST00000533730 ANKK1Q8NFD2 765 aa11.18□□□□□ -0.62
CASP4-212ENST00000533730 SLIT1O75093 1534 aa11.18□□□□□ -0.62
CASP4-212ENST00000533730 STRCQ7RTU9 1775 aa11.18□□□□□ -0.62
CASP4-212ENST00000533730 ARHGAP23Q9P227 1491 aa11.18□□□□□ -0.62
CASP4-212ENST00000533730 CLCN1P35523 988 aa11.17□□□□□ -0.62
CASP4-212ENST00000533730 HDGFP51858 240 aaKnown RBP11.17□□□□□ -0.62
CASP4-212ENST00000533730 MMRN1Q13201 1228 aa11.17□□□□□ -0.62
CASP4-212ENST00000533730 GPCPD1Q9NPB8 672 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms