RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 ZSCAN25Q6NSZ9 544 aa7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 PDCP20941 246 aa7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 TXLNAP40222 546 aa7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 NEK4P51957 841 aa7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 PDE3AQ14432 1141 aa7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 LRRCC1Q9C099 1032 aa7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 NAT10Q9H0A0 1025 aaKnown RBP7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 RAI14Q9P0K7 980 aa7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 CT47B1P0C2W7 299 aaPredicted RBP7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 GSE1Q14687 1217 aa7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 WDR63Q8IWG1 891 aa7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 TMOD2Q9NZR1 351 aa7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 DMRT2Q9Y5R5 561 aa7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 HECW1Q76N89 1606 aa7.63□□□□□ -1.19
UBQLN1-206ENST00000533705 NBPF8Q3BBV2 869 aa7.62□□□□□ -1.19
UBQLN1-206ENST00000533705 FCHSD2O94868 740 aa7.62□□□□□ -1.19
UBQLN1-206ENST00000533705 TNNT3P45378 269 aaPredicted RBP7.62□□□□□ -1.19
UBQLN1-206ENST00000533705 SPINK5Q9NQ38 1064 aaPredicted RBP7.62□□□□□ -1.19
UBQLN1-206ENST00000533705 ZNF652Q9Y2D9 606 aa7.62□□□□□ -1.19
UBQLN1-206ENST00000533705 KIAA0586Q9BVV6 1533 aa7.62□□□□□ -1.19
UBQLN1-206ENST00000533705 MCM2P49736 904 aa7.62□□□□□ -1.19
UBQLN1-206ENST00000533705 MPRIPQ6WCQ1 1025 aa7.62□□□□□ -1.19
UBQLN1-206ENST00000533705 PDZRN3Q9UPQ7 1066 aa7.62□□□□□ -1.19
UBQLN1-206ENST00000533705 LRP2BPQ9P2M1 347 aa7.62□□□□□ -1.19
UBQLN1-206ENST00000533705 TRIM22Q8IYM9 498 aa7.62□□□□□ -1.19
UBQLN1-206ENST00000533705 AMOTL2Q9Y2J4 779 aa7.62□□□□□ -1.19
UBQLN1-206ENST00000533705 DAPK1P53355 1430 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 GNAT3A8MTJ3 354 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 SRGAP3O43295 1099 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 NUP133Q8WUM0 1156 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 MAP4K4O95819 1239 aaPredicted RBP7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 SOGA3Q5TF21 947 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 PHF8Q9UPP1 1060 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 PAXIP1Q6ZW49 1069 aaPredicted RBP7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 SYNJ1O43426 1573 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 KINO60870 393 aaKnown RBP7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 ATF7IPQ6VMQ6 1270 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 AACSQ86V21 672 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 ZNF219Q9P2Y4 722 aaPredicted RBP7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 ABCF2Q9UG63 623 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 PPP6R1Q9UPN7 881 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 CCDC69A6NI79 296 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 TDO2P48775 406 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 FBXO31Q5XUX0 539 aaPredicted RBP7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 DNAJC5BQ9UF47 199 aa7.61□□□□□ -1.19
UBQLN1-206ENST00000533705 MPHOSPH10O00566 681 aaKnown RBP7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 STK38Q15208 465 aa7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 RABEP1Q15276 862 aa7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 USHBP1Q8N6Y0 703 aa7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 ZNF396Q96N95 335 aaPredicted RBP7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 MIS18AQ9NYP9 233 aa7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 CYP46A1Q9Y6A2 500 aa7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 EXOC5O00471 708 aa7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 BCAR3O75815 825 aa7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 NFE2L2Q16236 605 aa7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 ZHX3Q9H4I2 956 aa7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 HMGXB3Q12766 1538 aa7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 PRXQ9BXM0 1461 aa7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 IDH1O75874 414 aaKnown RBP7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 PDILTQ8N807 584 aa7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 JMYQ8N9B5 988 aa7.6□□□□□ -1.19
UBQLN1-206ENST00000533705 EPRSP07814 1512 aaKnown RBP7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 WDHD1O75717 1129 aaPredicted RBP7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 IBSPP21815 317 aaPredicted RBP7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 ANKRD1Q15327 319 aa7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 ANKIB1Q9P2G1 1089 aa7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 CEBPZQ03701 1054 aaKnown RBP7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 STK3Q13188 491 aa7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 METTL24Q5JXM2 366 aa7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 DNMBPQ6XZF7 1577 aa7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 CCDC173Q0VFZ6 552 aa7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 HSP90AB2PQ58FF8 381 aa7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 CTNNA3Q9UI47 895 aa7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 TTLL12Q14166 644 aaPredicted RBP7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 UBAC1Q9BSL1 405 aa7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 MAGEC2Q9UBF1 373 aaPredicted RBP7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 NSD3Q9BZ95 1437 aa7.59□□□□□ -1.19
UBQLN1-206ENST00000533705 AMOTQ4VCS5 1084 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 BCL11BQ9C0K0 894 aaPredicted RBP7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 IFT57Q9NWB7 429 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 CCDC141Q6ZP82 1450 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 MCM10Q7L590 875 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 UBAP1LF5GYI3 381 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 PIP4K2AP48426 406 aaPredicted RBP7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 FILIP1LQ4L180 1135 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 KRT28Q7Z3Y7 464 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 ARHGEF11O15085 1522 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 MVPQ14764 893 aaKnown RBP7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 IL1RAPL2Q9NP60 686 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 MAGI1Q96QZ7 1491 aaPredicted RBP7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 ZNF76P36508 570 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 SYCP1Q15431 976 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 CAVIN4Q5BKX8 364 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 CRACR2BQ8N4Y2 399 aaPredicted RBP7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 PIBF1Q8WXW3 757 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 FMNL2Q96PY5 1086 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 ADGRL1O94910 1474 aa7.58□□□□□ -1.2
UBQLN1-206ENST00000533705 RDXP35241 583 aaKnown RBP7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 TMPOP42166 694 aaKnown RBP7.57□□□□□ -1.2
UBQLN1-206ENST00000533705 USP5P45974 858 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms