RNA–Protein interactions for RNA: ENST00000532912.1

TRIM53BP-201, Transcript of tripartite motif containing 53B, pseudogene, humanhuman

BASIC

Gene TRIM53BP, Length 1,720 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53BP-201ENST00000532912 KIF16BQ96L93 1317 aa10.58□□□□□ -0.72
TRIM53BP-201ENST00000532912 DLG5Q8TDM6 1919 aa10.57□□□□□ -0.72
TRIM53BP-201ENST00000532912 SMC5Q8IY18 1101 aa10.57□□□□□ -0.72
TRIM53BP-201ENST00000532912 TMEM57Q8N5G2 664 aa10.57□□□□□ -0.72
TRIM53BP-201ENST00000532912 ZNF428Q96B54 188 aa10.57□□□□□ -0.72
TRIM53BP-201ENST00000532912 ZBTB40Q9NUA8 1239 aa10.57□□□□□ -0.72
TRIM53BP-201ENST00000532912 CCDC61Q9Y6R9 512 aa10.57□□□□□ -0.72
TRIM53BP-201ENST00000532912 NCKAP5LQ9HCH0 1330 aa10.57□□□□□ -0.72
TRIM53BP-201ENST00000532912 PIK3R4Q99570 1358 aa10.57□□□□□ -0.72
TRIM53BP-201ENST00000532912 ROBO2Q9HCK4 1378 aa10.57□□□□□ -0.72
TRIM53BP-201ENST00000532912 PTCH1Q13635 1447 aa10.56□□□□□ -0.72
TRIM53BP-201ENST00000532912 NFKBIBQ15653 356 aa10.55□□□□□ -0.72
TRIM53BP-201ENST00000532912 NALCNQ8IZF0 1738 aa10.55□□□□□ -0.72
TRIM53BP-201ENST00000532912 OVOS2A0A0J9YW53 1432 aa10.55□□□□□ -0.72
TRIM53BP-201ENST00000532912 OVOS2Q6IE36 1432 aa10.55□□□□□ -0.72
TRIM53BP-201ENST00000532912 VAMP4O75379 141 aa10.55□□□□□ -0.72
TRIM53BP-201ENST00000532912 HMOX1P09601 288 aa10.55□□□□□ -0.72
TRIM53BP-201ENST00000532912 ITPRIPQ8IWB1 547 aa10.55□□□□□ -0.72
TRIM53BP-201ENST00000532912 TBC1D32Q96NH3 1257 aa10.55□□□□□ -0.72
TRIM53BP-201ENST00000532912 IFT57Q9NWB7 429 aa10.55□□□□□ -0.72
TRIM53BP-201ENST00000532912 PLEKHG1Q9ULL1 1385 aa10.54□□□□□ -0.72
TRIM53BP-201ENST00000532912 IPO8O15397 1037 aaKnown RBP10.54□□□□□ -0.72
TRIM53BP-201ENST00000532912 HDGFP51858 240 aaKnown RBP10.54□□□□□ -0.72
TRIM53BP-201ENST00000532912 MRPL50Q8N5N7 158 aaKnown RBP10.54□□□□□ -0.72
TRIM53BP-201ENST00000532912 RGPD1P0DJD0 1748 aa10.54□□□□□ -0.72
TRIM53BP-201ENST00000532912 ARHGAP45Q92619 1136 aa10.53□□□□□ -0.72
TRIM53BP-201ENST00000532912 COG3Q96JB2 828 aa10.53□□□□□ -0.72
TRIM53BP-201ENST00000532912 THUMPD2Q9BTF0 503 aaKnown RBP10.53□□□□□ -0.72
TRIM53BP-201ENST00000532912 ZNF692Q9BU19 519 aaPredicted RBP10.53□□□□□ -0.72
TRIM53BP-201ENST00000532912 SSH2Q76I76 1423 aa10.53□□□□□ -0.72
TRIM53BP-201ENST00000532912 PTPRUQ92729 1446 aa10.53□□□□□ -0.72
TRIM53BP-201ENST00000532912 PEAK1Q9H792 1746 aa10.53□□□□□ -0.72
TRIM53BP-201ENST00000532912 CALD1Q05682 793 aaKnown RBP10.53□□□□□ -0.72
TRIM53BP-201ENST00000532912 RRS1Q15050 365 aaKnown RBP10.53□□□□□ -0.72
TRIM53BP-201ENST00000532912 TSPYL6Q8N831 410 aa10.53□□□□□ -0.72
TRIM53BP-201ENST00000532912 MBIPQ9NS73 344 aa10.53□□□□□ -0.72
TRIM53BP-201ENST00000532912 PLEKHG3A1L390 1219 aa10.52□□□□□ -0.73
TRIM53BP-201ENST00000532912 GNAI1P63096 354 aa10.52□□□□□ -0.73
TRIM53BP-201ENST00000532912 DAXXQ9UER7 740 aaPredicted RBP10.52□□□□□ -0.73
TRIM53BP-201ENST00000532912 ARHGAP23Q9P227 1491 aa10.52□□□□□ -0.73
TRIM53BP-201ENST00000532912 USP31Q70CQ4 1352 aa10.51□□□□□ -0.73
TRIM53BP-201ENST00000532912 ABCC4O15439 1325 aa10.51□□□□□ -0.73
TRIM53BP-201ENST00000532912 TTC21BQ7Z4L5 1316 aa10.51□□□□□ -0.73
TRIM53BP-201ENST00000532912 SLIT1O75093 1534 aa10.51□□□□□ -0.73
TRIM53BP-201ENST00000532912 ZBTB7BO15156 539 aaPredicted RBP10.51□□□□□ -0.73
TRIM53BP-201ENST00000532912 LTKP29376 864 aa10.51□□□□□ -0.73
TRIM53BP-201ENST00000532912 CFAP44Q96MT7 982 aa10.51□□□□□ -0.73
TRIM53BP-201ENST00000532912 ESF1Q9H501 851 aaKnown RBP10.51□□□□□ -0.73
TRIM53BP-201ENST00000532912 USP6P35125 1406 aa10.51□□□□□ -0.73
TRIM53BP-201ENST00000532912 NUCB1Q02818 461 aa10.5□□□□□ -0.73
TRIM53BP-201ENST00000532912 LMOD3Q0VAK6 560 aa10.5□□□□□ -0.73
TRIM53BP-201ENST00000532912 ANTXR1Q9H6X2 564 aa10.5□□□□□ -0.73
TRIM53BP-201ENST00000532912 ACEP12821 1306 aa10.49□□□□□ -0.73
TRIM53BP-201ENST00000532912 EIF4A2Q14240 407 aaKnown RBP10.49□□□□□ -0.73
TRIM53BP-201ENST00000532912 FAM83GA6ND36 823 aa10.48□□□□□ -0.73
TRIM53BP-201ENST00000532912 BECN1Q14457 450 aa10.48□□□□□ -0.73
TRIM53BP-201ENST00000532912 TWISTNBQ3B726 338 aaPredicted RBP10.48□□□□□ -0.73
TRIM53BP-201ENST00000532912 C8orf58Q8NAV2 365 aa10.48□□□□□ -0.73
TRIM53BP-201ENST00000532912 FRAT2O75474 233 aaPredicted RBP10.47□□□□□ -0.73
TRIM53BP-201ENST00000532912 AEBP1Q8IUX7 1158 aa10.47□□□□□ -0.73
TRIM53BP-201ENST00000532912 TBC1D2Q9BYX2 928 aa10.47□□□□□ -0.73
TRIM53BP-201ENST00000532912 UPF2Q9HAU5 1272 aaKnown RBP10.47□□□□□ -0.73
TRIM53BP-201ENST00000532912 KIF24Q5T7B8 1368 aa10.47□□□□□ -0.73
TRIM53BP-201ENST00000532912 RIMS1Q86UR5 1692 aaKnown RBP10.47□□□□□ -0.73
TRIM53BP-201ENST00000532912 RGS12O14924 1447 aa10.47□□□□□ -0.73
TRIM53BP-201ENST00000532912 CHD1LQ86WJ1 897 aa10.47□□□□□ -0.73
TRIM53BP-201ENST00000532912 SIRT2Q8IXJ6 389 aa10.47□□□□□ -0.73
TRIM53BP-201ENST00000532912 FMN2Q9NZ56 1722 aa10.46□□□□□ -0.73
TRIM53BP-201ENST00000532912 DIP2AQ14689 1571 aa10.46□□□□□ -0.74
TRIM53BP-201ENST00000532912 DCTN1Q14203 1278 aa10.46□□□□□ -0.74
TRIM53BP-201ENST00000532912 GSE1Q14687 1217 aa10.46□□□□□ -0.74
TRIM53BP-201ENST00000532912 XRN1Q8IZH2 1706 aaKnown RBP10.46□□□□□ -0.74
TRIM53BP-201ENST00000532912 CHL1O00533 1208 aa10.45□□□□□ -0.74
TRIM53BP-201ENST00000532912 SULT6B1Q6IMI4 303 aa10.45□□□□□ -0.74
TRIM53BP-201ENST00000532912 GCC1Q96CN9 775 aa10.45□□□□□ -0.74
TRIM53BP-201ENST00000532912 C22orf23Q9BZE7 217 aa10.45□□□□□ -0.74
TRIM53BP-201ENST00000532912 CHMP4BQ9H444 224 aaKnown RBP10.45□□□□□ -0.74
TRIM53BP-201ENST00000532912 CRB1P82279 1406 aa10.45□□□□□ -0.74
TRIM53BP-201ENST00000532912 ARHGEF10O15013 1369 aa10.45□□□□□ -0.74
TRIM53BP-201ENST00000532912 KIAA0232Q92628 1395 aa10.45□□□□□ -0.74
TRIM53BP-201ENST00000532912 ELL2O00472 640 aaPredicted RBP10.44□□□□□ -0.74
TRIM53BP-201ENST00000532912 API5Q9BZZ5 524 aaKnown RBP10.44□□□□□ -0.74
TRIM53BP-201ENST00000532912 LNPKQ9C0E8 428 aa10.44□□□□□ -0.74
TRIM53BP-201ENST00000532912 PIK3C2AO00443 1686 aa10.44□□□□□ -0.74
TRIM53BP-201ENST00000532912 USP54Q70EL1 1684 aa10.44□□□□□ -0.74
TRIM53BP-201ENST00000532912 TTC21AQ8NDW8 1320 aa10.44□□□□□ -0.74
TRIM53BP-201ENST00000532912 MARF1Q9Y4F3 1742 aaKnown RBP10.44□□□□□ -0.74
TRIM53BP-201ENST00000532912 HSP90AB2PQ58FF8 381 aa10.44□□□□□ -0.74
TRIM53BP-201ENST00000532912 BMP2KLQ5H9B9 411 aa10.44□□□□□ -0.74
TRIM53BP-201ENST00000532912 C1orf115Q9H7X2 142 aa10.44□□□□□ -0.74
TRIM53BP-201ENST00000532912 TBX22Q9Y458 520 aa10.44□□□□□ -0.74
TRIM53BP-201ENST00000532912 RGPD8O14715 1765 aaPredicted RBP10.43□□□□□ -0.74
TRIM53BP-201ENST00000532912 KDRP35968 1356 aa10.43□□□□□ -0.74
TRIM53BP-201ENST00000532912 CEBPAP49715 358 aaPredicted RBP10.43□□□□□ -0.74
TRIM53BP-201ENST00000532912 RBM25P49756 843 aaKnown RBP10.43□□□□□ -0.74
TRIM53BP-201ENST00000532912 MFAP1P55081 439 aaKnown RBP10.43□□□□□ -0.74
TRIM53BP-201ENST00000532912 INTS3Q68E01 1043 aaKnown RBP10.43□□□□□ -0.74
TRIM53BP-201ENST00000532912 SLC26A8Q96RN1 970 aa10.43□□□□□ -0.74
TRIM53BP-201ENST00000532912 ATP10DQ9P241 1426 aa10.43□□□□□ -0.74
TRIM53BP-201ENST00000532912 AMOTL2Q9Y2J4 779 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms