RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 WDR63Q8IWG1 891 aa10.52□□□□□ -0.72
CTNND1-232ENST00000532649 CNNM1Q9NRU3 951 aa10.52□□□□□ -0.72
CTNND1-232ENST00000532649 GNAI2P04899 355 aa10.52□□□□□ -0.73
CTNND1-232ENST00000532649 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.73
CTNND1-232ENST00000532649 FSD1Q9BTV5 496 aa10.52□□□□□ -0.73
CTNND1-232ENST00000532649 NUP153P49790 1475 aaKnown RBP10.52□□□□□ -0.73
CTNND1-232ENST00000532649 ADAMTS2O95450 1211 aa10.52□□□□□ -0.73
CTNND1-232ENST00000532649 DNAJC2Q99543 621 aaKnown RBP10.52□□□□□ -0.73
CTNND1-232ENST00000532649 GNAT3A8MTJ3 354 aa10.51□□□□□ -0.73
CTNND1-232ENST00000532649 BECN2A8MW95 431 aa10.51□□□□□ -0.73
CTNND1-232ENST00000532649 BCAR3O75815 825 aa10.51□□□□□ -0.73
CTNND1-232ENST00000532649 CNTROBQ8N137 903 aa10.51□□□□□ -0.73
CTNND1-232ENST00000532649 ITSN2Q9NZM3 1697 aa10.51□□□□□ -0.73
CTNND1-232ENST00000532649 RALYLQ86SE5 291 aaKnown RBP10.51□□□□□ -0.73
CTNND1-232ENST00000532649 SYCP2Q9BX26 1530 aa10.51□□□□□ -0.73
CTNND1-232ENST00000532649 HSP90AB2PQ58FF8 381 aa10.51□□□□□ -0.73
CTNND1-232ENST00000532649 NFE2L2Q16236 605 aa10.51□□□□□ -0.73
CTNND1-232ENST00000532649 TBC1D2BQ9UPU7 963 aa10.51□□□□□ -0.73
CTNND1-232ENST00000532649 CCT4P50991 539 aaKnown RBP10.5□□□□□ -0.73
CTNND1-232ENST00000532649 SRCIN1Q9C0H9 1055 aa10.5□□□□□ -0.73
CTNND1-232ENST00000532649 EIF4G3O43432 1585 aaKnown RBP10.5□□□□□ -0.73
CTNND1-232ENST00000532649 ZFYVE27Q5T4F4 411 aa10.5□□□□□ -0.73
CTNND1-232ENST00000532649 USHBP1Q8N6Y0 703 aa10.5□□□□□ -0.73
CTNND1-232ENST00000532649 DMRT2Q9Y5R5 561 aa10.5□□□□□ -0.73
CTNND1-232ENST00000532649 KIAA0556O60303 1618 aa10.5□□□□□ -0.73
CTNND1-232ENST00000532649 CDC45O75419 566 aa10.5□□□□□ -0.73
CTNND1-232ENST00000532649 NAP1L1P55209 391 aaKnown RBP10.5□□□□□ -0.73
CTNND1-232ENST00000532649 A2MP01023 1474 aa10.49□□□□□ -0.73
CTNND1-232ENST00000532649 ZNF518AQ6AHZ1 1483 aa10.49□□□□□ -0.73
CTNND1-232ENST00000532649 DDX11L8A8MPP1 907 aa10.49□□□□□ -0.73
CTNND1-232ENST00000532649 ERC1Q8IUD2 1116 aa10.49□□□□□ -0.73
CTNND1-232ENST00000532649 TMPOP42166 694 aaKnown RBP10.49□□□□□ -0.73
CTNND1-232ENST00000532649 AK7Q96M32 723 aa10.49□□□□□ -0.73
CTNND1-232ENST00000532649 RUFY1Q96T51 708 aa10.49□□□□□ -0.73
CTNND1-232ENST00000532649 SIL1Q9H173 461 aa10.49□□□□□ -0.73
CTNND1-232ENST00000532649 EPS15P42566 896 aa10.49□□□□□ -0.73
CTNND1-232ENST00000532649 C14orf93Q9H972 538 aaKnown RBP10.49□□□□□ -0.73
CTNND1-232ENST00000532649 UGGT2Q9NYU1 1516 aa10.48□□□□□ -0.73
CTNND1-232ENST00000532649 SCAF11Q99590 1463 aaKnown RBP10.48□□□□□ -0.73
CTNND1-232ENST00000532649 DUOX2Q9NRD8 1548 aa10.48□□□□□ -0.73
CTNND1-232ENST00000532649 CT47B1P0C2W7 299 aaPredicted RBP10.48□□□□□ -0.73
CTNND1-232ENST00000532649 PDE3AQ14432 1141 aa10.48□□□□□ -0.73
CTNND1-232ENST00000532649 TTC39AQ5SRH9 613 aa10.48□□□□□ -0.73
CTNND1-232ENST00000532649 KRT28Q7Z3Y7 464 aa10.48□□□□□ -0.73
CTNND1-232ENST00000532649 EMILIN1Q9Y6C2 1016 aa10.48□□□□□ -0.73
CTNND1-232ENST00000532649 CCDC184Q52MB2 194 aa10.48□□□□□ -0.73
CTNND1-232ENST00000532649 MCM10Q7L590 875 aa10.48□□□□□ -0.73
CTNND1-232ENST00000532649 MIS18AQ9NYP9 233 aa10.48□□□□□ -0.73
CTNND1-232ENST00000532649 FOSBP53539 338 aa10.48□□□□□ -0.73
CTNND1-232ENST00000532649 CCDC158Q5M9N0 1113 aa10.48□□□□□ -0.73
CTNND1-232ENST00000532649 DDX49Q9Y6V7 483 aaKnown RBP10.48□□□□□ -0.73
CTNND1-232ENST00000532649 LRPPRCP42704 1394 aaKnown RBP10.47□□□□□ -0.73
CTNND1-232ENST00000532649 PTCD1O75127 700 aaKnown RBP10.47□□□□□ -0.73
CTNND1-232ENST00000532649 THUMPD2Q9BTF0 503 aaKnown RBP10.47□□□□□ -0.73
CTNND1-232ENST00000532649 TMOD3Q9NYL9 352 aa10.47□□□□□ -0.73
CTNND1-232ENST00000532649 MTMR7Q9Y216 660 aa10.47□□□□□ -0.73
CTNND1-232ENST00000532649 RPRD2Q5VT52 1461 aaKnown RBP10.47□□□□□ -0.73
CTNND1-232ENST00000532649 ATF7IPQ6VMQ6 1270 aa10.47□□□□□ -0.73
CTNND1-232ENST00000532649 SMC3Q9UQE7 1217 aa10.47□□□□□ -0.73
CTNND1-232ENST00000532649 VPS37CA5D8V6 355 aaPredicted RBP10.47□□□□□ -0.73
CTNND1-232ENST00000532649 BICDL1Q6ZP65 573 aa10.47□□□□□ -0.73
CTNND1-232ENST00000532649 C22orf23Q9BZE7 217 aa10.47□□□□□ -0.73
CTNND1-232ENST00000532649 CCDC57Q2TAC2 916 aa10.46□□□□□ -0.73
CTNND1-232ENST00000532649 MPHOSPH8Q99549 860 aa10.46□□□□□ -0.73
CTNND1-232ENST00000532649 GNL3LQ9NVN8 582 aaKnown RBP10.46□□□□□ -0.73
CTNND1-232ENST00000532649 STARD3NLO95772 234 aa10.46□□□□□ -0.73
CTNND1-232ENST00000532649 GCC1Q96CN9 775 aa10.46□□□□□ -0.73
CTNND1-232ENST00000532649 DCTN1Q14203 1278 aa10.46□□□□□ -0.73
CTNND1-232ENST00000532649 NGLY1Q96IV0 654 aa10.46□□□□□ -0.73
CTNND1-232ENST00000532649 PDZRN3Q9UPQ7 1066 aa10.46□□□□□ -0.74
CTNND1-232ENST00000532649 UHRF1BP1LA0JNW5 1464 aa10.46□□□□□ -0.74
CTNND1-232ENST00000532649 CCDC173Q0VFZ6 552 aa10.46□□□□□ -0.74
CTNND1-232ENST00000532649 HSP90AA2PQ14568 343 aaPredicted RBP10.46□□□□□ -0.74
CTNND1-232ENST00000532649 TRAPPC8Q9Y2L5 1435 aa10.46□□□□□ -0.74
CTNND1-232ENST00000532649 CADPS2Q86UW7 1296 aa10.45□□□□□ -0.74
CTNND1-232ENST00000532649 C11orf95C9JLR9 678 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-232ENST00000532649 IKQ13123 557 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-232ENST00000532649 AMOTQ4VCS5 1084 aa10.45□□□□□ -0.74
CTNND1-232ENST00000532649 LRRCC1Q9C099 1032 aa10.45□□□□□ -0.74
CTNND1-232ENST00000532649 MYO6Q9UM54 1294 aa10.45□□□□□ -0.74
CTNND1-232ENST00000532649 SAFBQ15424 915 aaKnown RBP eCLIP10.44□□□□□ -0.74
CTNND1-232ENST00000532649 HIP1O00291 1037 aa10.44□□□□□ -0.74
CTNND1-232ENST00000532649 PSMA5P28066 241 aa10.44□□□□□ -0.74
CTNND1-232ENST00000532649 TEX35Q5T0J7 233 aa10.44□□□□□ -0.74
CTNND1-232ENST00000532649 WDR62O43379 1518 aa10.44□□□□□ -0.74
CTNND1-232ENST00000532649 ACEP12821 1306 aa10.44□□□□□ -0.74
CTNND1-232ENST00000532649 ZRSR2Q15696 482 aaKnown RBP10.44□□□□□ -0.74
CTNND1-232ENST00000532649 DUSP27Q5VZP5 1158 aa10.44□□□□□ -0.74
CTNND1-232ENST00000532649 BRMS1Q9HCU9 246 aa10.44□□□□□ -0.74
CTNND1-232ENST00000532649 MVPQ14764 893 aaKnown RBP10.44□□□□□ -0.74
CTNND1-232ENST00000532649 MPRIPQ6WCQ1 1025 aa10.44□□□□□ -0.74
CTNND1-232ENST00000532649 VSIG10Q8N0Z9 540 aa10.44□□□□□ -0.74
CTNND1-232ENST00000532649 MSH6P52701 1360 aa10.44□□□□□ -0.74
CTNND1-232ENST00000532649 SRGAP3O43295 1099 aa10.43□□□□□ -0.74
CTNND1-232ENST00000532649 SART3Q15020 963 aaKnown RBP10.43□□□□□ -0.74
CTNND1-232ENST00000532649 BICD2Q8TD16 824 aa10.43□□□□□ -0.74
CTNND1-232ENST00000532649 ZNF592Q92610 1267 aa10.43□□□□□ -0.74
CTNND1-232ENST00000532649 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-232ENST00000532649 ZNF771Q7L3S4 317 aaPredicted RBP10.43□□□□□ -0.74
CTNND1-232ENST00000532649 CCDC85AQ96PX6 553 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms