RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 MAP3K1Q13233 1512 aa12.89□□□□□ -0.35
CDC27-208ENST00000532575 UBR1Q8IWV7 1749 aa12.89□□□□□ -0.35
CDC27-208ENST00000532575 KCNA6P17658 529 aa12.89□□□□□ -0.35
CDC27-208ENST00000532575 KANK4Q5T7N3 995 aaPredicted RBP12.89□□□□□ -0.35
CDC27-208ENST00000532575 CCDC102AQ96A19 550 aa12.89□□□□□ -0.35
CDC27-208ENST00000532575 EYA1Q99502 592 aa12.89□□□□□ -0.35
CDC27-208ENST00000532575 SLC24A3Q9HC58 644 aa12.89□□□□□ -0.35
CDC27-208ENST00000532575 RGS17Q9UGC6 210 aaPredicted RBP12.89□□□□□ -0.35
CDC27-208ENST00000532575 ERBINQ96RT1 1412 aa12.88□□□□□ -0.35
CDC27-208ENST00000532575 MROH1Q8NDA8 1641 aa12.88□□□□□ -0.35
CDC27-208ENST00000532575 PROSER2Q86WR7 435 aaPredicted RBP12.87□□□□□ -0.35
CDC27-208ENST00000532575 MRPL50Q8N5N7 158 aaKnown RBP12.87□□□□□ -0.35
CDC27-208ENST00000532575 TMEM94Q12767 1356 aa12.86□□□□□ -0.35
CDC27-208ENST00000532575 OATP04181 439 aa12.86□□□□□ -0.35
CDC27-208ENST00000532575 IDI1Q13907 227 aa12.86□□□□□ -0.35
CDC27-208ENST00000532575 RBM46Q8TBY0 533 aaKnown RBP12.86□□□□□ -0.35
CDC27-208ENST00000532575 PXYLP1Q8TE99 480 aa12.86□□□□□ -0.35
CDC27-208ENST00000532575 STAC3Q96MF2 364 aa12.86□□□□□ -0.35
CDC27-208ENST00000532575 PRDM15P57071 1507 aaPredicted RBP12.86□□□□□ -0.35
CDC27-208ENST00000532575 METTL3Q86U44 580 aaKnown RBP12.85□□□□□ -0.35
CDC27-208ENST00000532575 LAPTM4BQ86VI4 370 aa12.85□□□□□ -0.35
CDC27-208ENST00000532575 ABCC5O15440 1437 aa12.85□□□□□ -0.35
CDC27-208ENST00000532575 CEP152O94986 1710 aa12.85□□□□□ -0.35
CDC27-208ENST00000532575 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
CDC27-208ENST00000532575 SLC52A1Q9NWF4 448 aa12.84□□□□□ -0.35
CDC27-208ENST00000532575 ANKRD30AQ9BXX3 1397 aa12.83□□□□□ -0.36
CDC27-208ENST00000532575 HDGFP51858 240 aaKnown RBP12.83□□□□□ -0.36
CDC27-208ENST00000532575 SPNS2Q8IVW8 549 aa12.83□□□□□ -0.36
CDC27-208ENST00000532575 SLC26A8Q96RN1 970 aa12.83□□□□□ -0.36
CDC27-208ENST00000532575 PHOX2BQ99453 314 aa12.83□□□□□ -0.36
CDC27-208ENST00000532575 EFCAB6Q5THR3 1501 aa12.83□□□□□ -0.36
CDC27-208ENST00000532575 CFAP65Q6ZU64 1925 aaKnown RBP12.82□□□□□ -0.36
CDC27-208ENST00000532575 LOC105371045A0A1W2PR82 267 aa12.82□□□□□ -0.36
CDC27-208ENST00000532575 AK7Q96M32 723 aa12.82□□□□□ -0.36
CDC27-208ENST00000532575 MSH6P52701 1360 aa12.81□□□□□ -0.36
CDC27-208ENST00000532575 RCCD1A6NED2 376 aa12.81□□□□□ -0.36
CDC27-208ENST00000532575 POTEAQ6S8J7 498 aa12.81□□□□□ -0.36
CDC27-208ENST00000532575 SLAIN2Q9P270 581 aa12.81□□□□□ -0.36
CDC27-208ENST00000532575 PIK3C2BO00750 1634 aa12.8□□□□□ -0.36
CDC27-208ENST00000532575 DAPK1P53355 1430 aa12.8□□□□□ -0.36
CDC27-208ENST00000532575 LMTK2Q8IWU2 1503 aa12.8□□□□□ -0.36
CDC27-208ENST00000532575 ZFRQ96KR1 1074 aaKnown RBP12.8□□□□□ -0.36
CDC27-208ENST00000532575 KDM5AP29375 1690 aaKnown RBP12.8□□□□□ -0.36
CDC27-208ENST00000532575 DNAJB2P25686 324 aa12.79□□□□□ -0.36
CDC27-208ENST00000532575 NLRP7Q8WX94 980 aa12.79□□□□□ -0.36
CDC27-208ENST00000532575 CHIC2Q9UKJ5 165 aa12.79□□□□□ -0.36
CDC27-208ENST00000532575 NKTRP30414 1462 aaKnown RBP12.78□□□□□ -0.36
CDC27-208ENST00000532575 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.78□□□□□ -0.36
CDC27-208ENST00000532575 GOLGA8CPA6NN73 597 aa12.78□□□□□ -0.36
CDC27-208ENST00000532575 TRIM66O15016 1216 aa12.78□□□□□ -0.36
CDC27-208ENST00000532575 NOS1P29475 1434 aa12.78□□□□□ -0.36
CDC27-208ENST00000532575 PTPN23Q9H3S7 1636 aa12.77□□□□□ -0.36
CDC27-208ENST00000532575 TET3O43151 1660 aa12.77□□□□□ -0.36
CDC27-208ENST00000532575 XIRP1Q702N8 1843 aaKnown RBP12.77□□□□□ -0.37
CDC27-208ENST00000532575 PPP1R15AO75807 674 aaPredicted RBP12.77□□□□□ -0.37
CDC27-208ENST00000532575 JCADQ9P266 1359 aa12.77□□□□□ -0.37
CDC27-208ENST00000532575 FGD6Q6ZV73 1430 aa12.77□□□□□ -0.37
CDC27-208ENST00000532575 SAMD7Q7Z3H4 446 aa12.75□□□□□ -0.37
CDC27-208ENST00000532575 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.75□□□□□ -0.37
CDC27-208ENST00000532575 TMEM134Q9H6X4 195 aa12.75□□□□□ -0.37
CDC27-208ENST00000532575 TBX22Q9Y458 520 aa12.75□□□□□ -0.37
CDC27-208ENST00000532575 ROBO1Q9Y6N7 1651 aa12.75□□□□□ -0.37
CDC27-208ENST00000532575 CROCC2H7BZ55 1655 aa12.74□□□□□ -0.37
CDC27-208ENST00000532575 ADGRB3O60242 1522 aa12.74□□□□□ -0.37
CDC27-208ENST00000532575 RPRD2Q5VT52 1461 aaKnown RBP12.74□□□□□ -0.37
CDC27-208ENST00000532575 NCOA3Q9Y6Q9 1424 aa12.74□□□□□ -0.37
CDC27-208ENST00000532575 PLEKHG1Q9ULL1 1385 aa12.74□□□□□ -0.37
CDC27-208ENST00000532575 SWT1Q5T5J6 900 aaKnown RBP12.74□□□□□ -0.37
CDC27-208ENST00000532575 WNT2BQ93097 391 aa12.74□□□□□ -0.37
CDC27-208ENST00000532575 SPATA31A6Q5VVP1 1343 aa12.73□□□□□ -0.37
CDC27-208ENST00000532575 AMHR2Q16671 573 aa12.73□□□□□ -0.37
CDC27-208ENST00000532575 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
CDC27-208ENST00000532575 NWD1Q149M9 1564 aa12.73□□□□□ -0.37
CDC27-208ENST00000532575 ZNF772Q68DY9 489 aaPredicted RBP12.72□□□□□ -0.37
CDC27-208ENST00000532575 ANKK1Q8NFD2 765 aa12.72□□□□□ -0.37
CDC27-208ENST00000532575 KCTD12Q96CX2 325 aaKnown RBP12.72□□□□□ -0.37
CDC27-208ENST00000532575 RIMS2Q9UQ26 1411 aa12.71□□□□□ -0.37
CDC27-208ENST00000532575 ATF3P18847 181 aa12.71□□□□□ -0.37
CDC27-208ENST00000532575 MDM2Q00987 491 aaPredicted RBP12.71□□□□□ -0.37
CDC27-208ENST00000532575 MEX3CQ5U5Q3 659 aaKnown RBP12.71□□□□□ -0.37
CDC27-208ENST00000532575 C19orf44Q9H6X5 657 aa12.71□□□□□ -0.37
CDC27-208ENST00000532575 ZFYVE9O95405 1425 aa12.71□□□□□ -0.38
CDC27-208ENST00000532575 PDE4DQ08499 809 aa12.7□□□□□ -0.38
CDC27-208ENST00000532575 FAM50AQ14320 339 aaKnown RBP12.7□□□□□ -0.38
CDC27-208ENST00000532575 LRCH3Q96II8 777 aa12.7□□□□□ -0.38
CDC27-208ENST00000532575 ADGRL2O95490 1459 aa12.7□□□□□ -0.38
CDC27-208ENST00000532575 ANKRD50Q9ULJ7 1429 aa12.7□□□□□ -0.38
CDC27-208ENST00000532575 SOWAHBA6NEL2 793 aa12.69□□□□□ -0.38
CDC27-208ENST00000532575 BCAMP50895 628 aa12.69□□□□□ -0.38
CDC27-208ENST00000532575 RNF166Q96A37 237 aaPredicted RBP12.69□□□□□ -0.38
CDC27-208ENST00000532575 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.69□□□□□ -0.38
CDC27-208ENST00000532575 DAXXQ9UER7 740 aaPredicted RBP12.69□□□□□ -0.38
CDC27-208ENST00000532575 PIK3R4Q99570 1358 aa12.69□□□□□ -0.38
CDC27-208ENST00000532575 MMRN1Q13201 1228 aa12.68□□□□□ -0.38
CDC27-208ENST00000532575 THSD4Q6ZMP0 1018 aa12.68□□□□□ -0.38
CDC27-208ENST00000532575 TMUB1Q9BVT8 246 aa12.68□□□□□ -0.38
CDC27-208ENST00000532575 REPIN1Q9BWE0 567 aaKnown RBP12.68□□□□□ -0.38
CDC27-208ENST00000532575 PHLPP1O60346 1717 aa12.68□□□□□ -0.38
CDC27-208ENST00000532575 CLCN1P35523 988 aa12.67□□□□□ -0.38
CDC27-208ENST00000532575 GPCPD1Q9NPB8 672 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms