RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 EDC4Q6P2E9 1401 aaKnown RBP11.08□□□□□ -0.64
TRIM49-202ENST00000532501 ZNF316A6NFI3 1004 aaPredicted RBP11.08□□□□□ -0.64
TRIM49-202ENST00000532501 MS4A3Q96HJ5 214 aa11.08□□□□□ -0.64
TRIM49-202ENST00000532501 PER1O15534 1290 aaPredicted RBP11.07□□□□□ -0.64
TRIM49-202ENST00000532501 SLC24A1O60721 1099 aa11.07□□□□□ -0.64
TRIM49-202ENST00000532501 HDGFL2Q7Z4V5 671 aaPredicted RBP11.07□□□□□ -0.64
TRIM49-202ENST00000532501 MARF1Q9Y4F3 1742 aaKnown RBP11.06□□□□□ -0.64
TRIM49-202ENST00000532501 OVOS2A0A0J9YW53 1432 aa11.06□□□□□ -0.64
TRIM49-202ENST00000532501 OVOS2Q6IE36 1432 aa11.06□□□□□ -0.64
TRIM49-202ENST00000532501 FBLN1P23142 703 aa11.06□□□□□ -0.64
TRIM49-202ENST00000532501 DDX10Q13206 875 aaKnown RBP11.06□□□□□ -0.64
TRIM49-202ENST00000532501 LMOD2Q6P5Q4 547 aa11.06□□□□□ -0.64
TRIM49-202ENST00000532501 GGNBP2Q9H3C7 697 aa11.06□□□□□ -0.64
TRIM49-202ENST00000532501 TERF2IPQ9NYB0 399 aa11.06□□□□□ -0.64
TRIM49-202ENST00000532501 USP19O94966 1318 aa11.05□□□□□ -0.64
TRIM49-202ENST00000532501 JCADQ9P266 1359 aa11.05□□□□□ -0.64
TRIM49-202ENST00000532501 FYB1O15117 783 aa11.05□□□□□ -0.64
TRIM49-202ENST00000532501 CRYBG1Q9Y4K1 1723 aa11.04□□□□□ -0.64
TRIM49-202ENST00000532501 AMER1Q5JTC6 1135 aaPredicted RBP11.04□□□□□ -0.64
TRIM49-202ENST00000532501 LRRC59Q96AG4 307 aaKnown RBP11.04□□□□□ -0.64
TRIM49-202ENST00000532501 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
TRIM49-202ENST00000532501 ABTB2Q8N961 1025 aa11.03□□□□□ -0.64
TRIM49-202ENST00000532501 TTC21AQ8NDW8 1320 aa11.03□□□□□ -0.64
TRIM49-202ENST00000532501 COL22A1Q8NFW1 1626 aaPredicted RBP11.03□□□□□ -0.64
TRIM49-202ENST00000532501 SHPRHQ149N8 1683 aa11.03□□□□□ -0.64
TRIM49-202ENST00000532501 SLIT3O75094 1523 aa11.03□□□□□ -0.64
TRIM49-202ENST00000532501 ARHGEF10O15013 1369 aa11.03□□□□□ -0.64
TRIM49-202ENST00000532501 ABCA3Q99758 1704 aa11.02□□□□□ -0.64
TRIM49-202ENST00000532501 SOX12O15370 315 aa11.02□□□□□ -0.64
TRIM49-202ENST00000532501 NLRP6P59044 892 aa11.02□□□□□ -0.64
TRIM49-202ENST00000532501 CNGB1Q14028 1251 aaPredicted RBP11.02□□□□□ -0.64
TRIM49-202ENST00000532501 BRD4O60885 1362 aaPredicted RBP11.02□□□□□ -0.65
TRIM49-202ENST00000532501 NUTM2BA6NNL0 878 aaPredicted RBP11.01□□□□□ -0.65
TRIM49-202ENST00000532501 NUTM2EB1AL46 878 aaPredicted RBP11.01□□□□□ -0.65
TRIM49-202ENST00000532501 NUTM2AQ8IVF1 878 aaPredicted RBP11.01□□□□□ -0.65
TRIM49-202ENST00000532501 NFAT5O94916 1531 aa11.01□□□□□ -0.65
TRIM49-202ENST00000532501 PHRF1Q9P1Y6 1649 aaKnown RBP11.01□□□□□ -0.65
TRIM49-202ENST00000532501 USP54Q70EL1 1684 aa11□□□□□ -0.65
TRIM49-202ENST00000532501 ADAMTS2O95450 1211 aa11□□□□□ -0.65
TRIM49-202ENST00000532501 GCP02774 474 aa10.99□□□□□ -0.65
TRIM49-202ENST00000532501 ZC3H6P61129 1189 aaKnown RBP10.99□□□□□ -0.65
TRIM49-202ENST00000532501 MMRN1Q13201 1228 aa10.99□□□□□ -0.65
TRIM49-202ENST00000532501 CHRNA2Q15822 529 aa10.99□□□□□ -0.65
TRIM49-202ENST00000532501 CC2D1BQ5T0F9 858 aaKnown RBP10.99□□□□□ -0.65
TRIM49-202ENST00000532501 CGNL1Q0VF96 1302 aa10.99□□□□□ -0.65
TRIM49-202ENST00000532501 KIAA0232Q92628 1395 aa10.98□□□□□ -0.65
TRIM49-202ENST00000532501 ATN1P54259 1190 aaPredicted RBP10.98□□□□□ -0.65
TRIM49-202ENST00000532501 KIF20BQ96Q89 1820 aa10.97□□□□□ -0.65
TRIM49-202ENST00000532501 TNNT2P45379 298 aaPredicted RBP10.97□□□□□ -0.65
TRIM49-202ENST00000532501 RRS1Q15050 365 aaKnown RBP10.97□□□□□ -0.65
TRIM49-202ENST00000532501 NLRP13Q86W25 1043 aa10.97□□□□□ -0.65
TRIM49-202ENST00000532501 KNSTRNQ9Y448 316 aa10.97□□□□□ -0.65
TRIM49-202ENST00000532501 SPATA31A6Q5VVP1 1343 aa10.97□□□□□ -0.65
TRIM49-202ENST00000532501 COG3Q96JB2 828 aa10.96□□□□□ -0.65
TRIM49-202ENST00000532501 EMILIN1Q9Y6C2 1016 aa10.96□□□□□ -0.65
TRIM49-202ENST00000532501 MAP3K19Q56UN5 1328 aa10.96□□□□□ -0.65
TRIM49-202ENST00000532501 FAM83GA6ND36 823 aa10.95□□□□□ -0.66
TRIM49-202ENST00000532501 ARHGEF25Q86VW2 580 aa10.95□□□□□ -0.66
TRIM49-202ENST00000532501 PEAK1Q9H792 1746 aa10.95□□□□□ -0.66
TRIM49-202ENST00000532501 NPC1L1Q9UHC9 1359 aa10.95□□□□□ -0.66
TRIM49-202ENST00000532501 AXIN2Q9Y2T1 843 aa10.95□□□□□ -0.66
TRIM49-202ENST00000532501 CPDO75976 1380 aa10.94□□□□□ -0.66
TRIM49-202ENST00000532501 NSD2O96028 1365 aa10.94□□□□□ -0.66
TRIM49-202ENST00000532501 ZBTB7CA1YPR0 619 aa10.94□□□□□ -0.66
TRIM49-202ENST00000532501 RGS17Q9UGC6 210 aaPredicted RBP10.94□□□□□ -0.66
TRIM49-202ENST00000532501 CAMTA1Q9Y6Y1 1673 aa10.94□□□□□ -0.66
TRIM49-202ENST00000532501 C8orf37Q96NL8 207 aa10.93□□□□□ -0.66
TRIM49-202ENST00000532501 LMO7Q8WWI1 1683 aa10.93□□□□□ -0.66
TRIM49-202ENST00000532501 SLIT2O94813 1529 aa10.93□□□□□ -0.66
TRIM49-202ENST00000532501 PARD3Q8TEW0 1356 aa10.93□□□□□ -0.66
TRIM49-202ENST00000532501 COL18A1P39060 1754 aa10.93□□□□□ -0.66
TRIM49-202ENST00000532501 ANKRD26Q9UPS8 1709 aa10.93□□□□□ -0.66
TRIM49-202ENST00000532501 MORC1Q86VD1 984 aa10.92□□□□□ -0.66
TRIM49-202ENST00000532501 PRDM11Q9NQV5 511 aa10.92□□□□□ -0.66
TRIM49-202ENST00000532501 POLKQ9UBT6 870 aa10.92□□□□□ -0.66
TRIM49-202ENST00000532501 BCL9LQ86UU0 1499 aa10.92□□□□□ -0.66
TRIM49-202ENST00000532501 AFF2P51816 1311 aa10.92□□□□□ -0.66
TRIM49-202ENST00000532501 POTEFA5A3E0 1075 aa10.92□□□□□ -0.66
TRIM49-202ENST00000532501 HAP1P54257 671 aaPredicted RBP10.92□□□□□ -0.66
TRIM49-202ENST00000532501 SPNS2Q8IVW8 549 aa10.92□□□□□ -0.66
TRIM49-202ENST00000532501 SMG6Q86US8 1419 aaKnown RBP10.91□□□□□ -0.66
TRIM49-202ENST00000532501 AATKQ6ZMQ8 1374 aa10.91□□□□□ -0.66
TRIM49-202ENST00000532501 HOXC9P31274 260 aa10.9□□□□□ -0.66
TRIM49-202ENST00000532501 HSP90AB2PQ58FF8 381 aa10.9□□□□□ -0.66
TRIM49-202ENST00000532501 FNBP4Q8N3X1 1017 aaPredicted RBP10.9□□□□□ -0.66
TRIM49-202ENST00000532501 KCNH5Q8NCM2 988 aa10.9□□□□□ -0.66
TRIM49-202ENST00000532501 COL5A2P05997 1499 aaPredicted RBP10.9□□□□□ -0.66
TRIM49-202ENST00000532501 NRAPQ86VF7 1730 aa10.89□□□□□ -0.67
TRIM49-202ENST00000532501 PLCH1Q4KWH8 1693 aa10.89□□□□□ -0.67
TRIM49-202ENST00000532501 COL3A1P02461 1466 aaPredicted RBP10.89□□□□□ -0.67
TRIM49-202ENST00000532501 PPP2R1AP30153 589 aa10.89□□□□□ -0.67
TRIM49-202ENST00000532501 CCDC184Q52MB2 194 aa10.89□□□□□ -0.67
TRIM49-202ENST00000532501 MEX3CQ5U5Q3 659 aaKnown RBP10.89□□□□□ -0.67
TRIM49-202ENST00000532501 NGLY1Q96IV0 654 aa10.89□□□□□ -0.67
TRIM49-202ENST00000532501 PRKRIP1Q9H875 184 aaPredicted RBP10.89□□□□□ -0.67
TRIM49-202ENST00000532501 BTG4Q9NY30 223 aa10.89□□□□□ -0.67
TRIM49-202ENST00000532501 LARP1Q6PKG0 1096 aaKnown RBP10.88□□□□□ -0.67
TRIM49-202ENST00000532501 POTEAQ6S8J7 498 aa10.88□□□□□ -0.67
TRIM49-202ENST00000532501 IP6K1Q92551 441 aa10.88□□□□□ -0.67
TRIM49-202ENST00000532501 LTN1O94822 1766 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms