RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 EMILIN1Q9Y6C2 1016 aa21.37■■□□□ 1.01
VPS26B-206ENST00000531741 TMEM2Q9UHN6 1383 aa21.37■■□□□ 1.01
VPS26B-206ENST00000531741 COG3Q96JB2 828 aa21.36■■□□□ 1.01
VPS26B-206ENST00000531741 PHACTR3Q96KR7 559 aa21.36■■□□□ 1.01
VPS26B-206ENST00000531741 PIK3R4Q99570 1358 aa21.36■■□□□ 1.01
VPS26B-206ENST00000531741 ZNF853P0CG23 659 aa21.36■■□□□ 1.01
VPS26B-206ENST00000531741 FBLN1P23142 703 aa21.36■■□□□ 1.01
VPS26B-206ENST00000531741 GNAI1P63096 354 aa21.36■■□□□ 1.01
VPS26B-206ENST00000531741 NRKQ7Z2Y5 1582 aa21.35■■□□□ 1.01
VPS26B-206ENST00000531741 PTCH1Q13635 1447 aa21.35■■□□□ 1.01
VPS26B-206ENST00000531741 LMOD3Q0VAK6 560 aa21.35■■□□□ 1.01
VPS26B-206ENST00000531741 CHMP4BQ9H444 224 aaKnown RBP21.35■■□□□ 1.01
VPS26B-206ENST00000531741 VAMP4O75379 141 aa21.33■■□□□ 1.01
VPS26B-206ENST00000531741 HMOX1P09601 288 aa21.33■■□□□ 1.01
VPS26B-206ENST00000531741 TOPAZ1Q8N9V7 1692 aa21.33■■□□□ 1
VPS26B-206ENST00000531741 DLG5Q8TDM6 1919 aa21.33■■□□□ 1
VPS26B-206ENST00000531741 ADAMTS13Q76LX8 1427 aa21.32■■□□□ 1
VPS26B-206ENST00000531741 PRR36Q9H6K5 1346 aa21.3■■□□□ 1
VPS26B-206ENST00000531741 MRPL50Q8N5N7 158 aaKnown RBP21.3■■□□□ 1
VPS26B-206ENST00000531741 ZRANB1Q9UGI0 708 aa21.3■■□□□ 1
VPS26B-206ENST00000531741 ROBO2Q9HCK4 1378 aa21.3■■□□□ 1
VPS26B-206ENST00000531741 CFAP44Q96MT7 982 aa21.3■■□□□ 1
VPS26B-206ENST00000531741 PLEKHG1Q9ULL1 1385 aa21.29■■□□□ 1
VPS26B-206ENST00000531741 NUCB1Q02818 461 aa21.28■■□□□ 1
VPS26B-206ENST00000531741 GSE1Q14687 1217 aa21.28■■□□□ 1
VPS26B-206ENST00000531741 MBIPQ9NS73 344 aa21.28■■□□□ 1
VPS26B-206ENST00000531741 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.27■■□□□ 1
VPS26B-206ENST00000531741 NALCNQ8IZF0 1738 aa21.27■■□□□ 1
VPS26B-206ENST00000531741 ABCC4O15439 1325 aa21.26■□□□□ 0.99
VPS26B-206ENST00000531741 NCKAP5LQ9HCH0 1330 aa21.26■□□□□ 0.99
VPS26B-206ENST00000531741 PLEKHG3A1L390 1219 aa21.26■□□□□ 0.99
VPS26B-206ENST00000531741 ZBTB7BO15156 539 aaPredicted RBP21.26■□□□□ 0.99
VPS26B-206ENST00000531741 THUMPD2Q9BTF0 503 aaKnown RBP21.26■□□□□ 0.99
VPS26B-206ENST00000531741 OVOS2A0A0J9YW53 1432 aa21.26■□□□□ 0.99
VPS26B-206ENST00000531741 OVOS2Q6IE36 1432 aa21.26■□□□□ 0.99
VPS26B-206ENST00000531741 RRS1Q15050 365 aaKnown RBP21.25■□□□□ 0.99
VPS26B-206ENST00000531741 TSPYL6Q8N831 410 aa21.25■□□□□ 0.99
VPS26B-206ENST00000531741 KIF24Q5T7B8 1368 aa21.24■□□□□ 0.99
VPS26B-206ENST00000531741 TTC21BQ7Z4L5 1316 aa21.24■□□□□ 0.99
VPS26B-206ENST00000531741 FRAT2O75474 233 aaPredicted RBP21.24■□□□□ 0.99
VPS26B-206ENST00000531741 GCC1Q96CN9 775 aa21.24■□□□□ 0.99
VPS26B-206ENST00000531741 ANTXR1Q9H6X2 564 aa21.24■□□□□ 0.99
VPS26B-206ENST00000531741 TWISTNBQ3B726 338 aaPredicted RBP21.23■□□□□ 0.99
VPS26B-206ENST00000531741 USP6P35125 1406 aa21.22■□□□□ 0.99
VPS26B-206ENST00000531741 RGPD1P0DJD0 1748 aa21.22■□□□□ 0.99
VPS26B-206ENST00000531741 USP31Q70CQ4 1352 aa21.22■□□□□ 0.99
VPS26B-206ENST00000531741 CHD1LQ86WJ1 897 aa21.22■□□□□ 0.99
VPS26B-206ENST00000531741 TBC1D2Q9BYX2 928 aa21.22■□□□□ 0.99
VPS26B-206ENST00000531741 C22orf23Q9BZE7 217 aa21.22■□□□□ 0.99
VPS26B-206ENST00000531741 API5Q9BZZ5 524 aaKnown RBP21.21■□□□□ 0.99
VPS26B-206ENST00000531741 SSH2Q76I76 1423 aa21.2■□□□□ 0.98
VPS26B-206ENST00000531741 ACEP12821 1306 aa21.2■□□□□ 0.98
VPS26B-206ENST00000531741 HAP1P54257 671 aaPredicted RBP21.19■□□□□ 0.98
VPS26B-206ENST00000531741 EIF4A2Q14240 407 aaKnown RBP21.19■□□□□ 0.98
VPS26B-206ENST00000531741 C8orf58Q8NAV2 365 aa21.19■□□□□ 0.98
VPS26B-206ENST00000531741 SLIT1O75093 1534 aa21.18■□□□□ 0.98
VPS26B-206ENST00000531741 BMP2KLQ5H9B9 411 aa21.18■□□□□ 0.98
VPS26B-206ENST00000531741 LTKP29376 864 aa21.17■□□□□ 0.98
VPS26B-206ENST00000531741 PEAK1Q9H792 1746 aa21.17■□□□□ 0.98
VPS26B-206ENST00000531741 ARHGAP23Q9P227 1491 aa21.17■□□□□ 0.98
VPS26B-206ENST00000531741 MFAP1P55081 439 aaKnown RBP21.16■□□□□ 0.98
VPS26B-206ENST00000531741 LNPKQ9C0E8 428 aa21.16■□□□□ 0.98
VPS26B-206ENST00000531741 KIAA0232Q92628 1395 aa21.16■□□□□ 0.98
VPS26B-206ENST00000531741 PTPRUQ92729 1446 aa21.16■□□□□ 0.98
VPS26B-206ENST00000531741 FAM83GA6ND36 823 aa21.16■□□□□ 0.98
VPS26B-206ENST00000531741 TTC21AQ8NDW8 1320 aa21.14■□□□□ 0.98
VPS26B-206ENST00000531741 RBM25P49756 843 aaKnown RBP21.14■□□□□ 0.98
VPS26B-206ENST00000531741 SULT6B1Q6IMI4 303 aa21.14■□□□□ 0.98
VPS26B-206ENST00000531741 ELL2O00472 640 aaPredicted RBP21.14■□□□□ 0.97
VPS26B-206ENST00000531741 CHL1O00533 1208 aa21.14■□□□□ 0.97
VPS26B-206ENST00000531741 SLKQ9H2G2 1235 aaPredicted RBP21.14■□□□□ 0.97
VPS26B-206ENST00000531741 ARHGEF10O15013 1369 aa21.13■□□□□ 0.97
VPS26B-206ENST00000531741 DIP2AQ14689 1571 aa21.13■□□□□ 0.97
VPS26B-206ENST00000531741 AEBP1Q8IUX7 1158 aa21.13■□□□□ 0.97
VPS26B-206ENST00000531741 SIRT2Q8IXJ6 389 aa21.13■□□□□ 0.97
VPS26B-206ENST00000531741 EID1Q9Y6B2 187 aa21.13■□□□□ 0.97
VPS26B-206ENST00000531741 INTS3Q68E01 1043 aaKnown RBP21.12■□□□□ 0.97
VPS26B-206ENST00000531741 RIMS1Q86UR5 1692 aaKnown RBP21.12■□□□□ 0.97
VPS26B-206ENST00000531741 FMN2Q9NZ56 1722 aa21.11■□□□□ 0.97
VPS26B-206ENST00000531741 DCTN1Q14203 1278 aa21.11■□□□□ 0.97
VPS26B-206ENST00000531741 TBX22Q9Y458 520 aa21.11■□□□□ 0.97
VPS26B-206ENST00000531741 ANKRD45Q5TZF3 282 aa21.11■□□□□ 0.97
VPS26B-206ENST00000531741 RGS12O14924 1447 aa21.1■□□□□ 0.97
VPS26B-206ENST00000531741 C1orf115Q9H7X2 142 aa21.09■□□□□ 0.97
VPS26B-206ENST00000531741 CRB1P82279 1406 aa21.08■□□□□ 0.97
VPS26B-206ENST00000531741 HSP90AB2PQ58FF8 381 aa21.08■□□□□ 0.97
VPS26B-206ENST00000531741 SNX21Q969T3 373 aa21.08■□□□□ 0.97
VPS26B-206ENST00000531741 PTPRCP08575 1304 aa21.07■□□□□ 0.96
VPS26B-206ENST00000531741 SBNO1A3KN83 1393 aa21.07■□□□□ 0.96
VPS26B-206ENST00000531741 KDRP35968 1356 aa21.07■□□□□ 0.96
VPS26B-206ENST00000531741 NCOA3Q9Y6Q9 1424 aa21.07■□□□□ 0.96
VPS26B-206ENST00000531741 FLT4P35916 1363 aa21.06■□□□□ 0.96
VPS26B-206ENST00000531741 AMOTL2Q9Y2J4 779 aa21.06■□□□□ 0.96
VPS26B-206ENST00000531741 EIF5BO60841 1220 aaKnown RBP21.05■□□□□ 0.96
VPS26B-206ENST00000531741 HSCBQ8IWL3 235 aa21.05■□□□□ 0.96
VPS26B-206ENST00000531741 SLC26A8Q96RN1 970 aa21.05■□□□□ 0.96
VPS26B-206ENST00000531741 DCTPP1Q9H773 170 aa21.05■□□□□ 0.96
VPS26B-206ENST00000531741 CHMP5Q9NZZ3 219 aa21.05■□□□□ 0.96
VPS26B-206ENST00000531741 XRN1Q8IZH2 1706 aaKnown RBP21.05■□□□□ 0.96
VPS26B-206ENST00000531741 MAP3K19Q56UN5 1328 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms