RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 MORC1Q86VD1 984 aa8.65□□□□□ -1.03
CTNND1-229ENST00000531014 RBM33Q96EV2 1170 aaKnown RBP8.65□□□□□ -1.03
CTNND1-229ENST00000531014 USP21Q9UK80 565 aa8.65□□□□□ -1.03
CTNND1-229ENST00000531014 RUSC2Q8N2Y8 1516 aa8.65□□□□□ -1.03
CTNND1-229ENST00000531014 CPLX1O14810 134 aa8.64□□□□□ -1.03
CTNND1-229ENST00000531014 SSR1P43307 286 aaKnown RBP8.64□□□□□ -1.03
CTNND1-229ENST00000531014 CCDC125Q86Z20 511 aa8.64□□□□□ -1.03
CTNND1-229ENST00000531014 RTEL1-TNFRSF6BF6WH68 1400 aa8.64□□□□□ -1.03
CTNND1-229ENST00000531014 PDE4AP27815 886 aa8.64□□□□□ -1.03
CTNND1-229ENST00000531014 LRRCC1Q9C099 1032 aa8.64□□□□□ -1.03
CTNND1-229ENST00000531014 CCDC91Q7Z6B0 441 aa8.64□□□□□ -1.03
CTNND1-229ENST00000531014 FANCIQ9NVI1 1328 aa8.64□□□□□ -1.03
CTNND1-229ENST00000531014 CDCA7Q9BWT1 371 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-229ENST00000531014 PTPRMP28827 1452 aa8.63□□□□□ -1.03
CTNND1-229ENST00000531014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.63□□□□□ -1.03
CTNND1-229ENST00000531014 ZKSCAN1P17029 563 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-229ENST00000531014 TRIM5Q9C035 493 aa8.63□□□□□ -1.03
CTNND1-229ENST00000531014 SLAIN2Q9P270 581 aa8.63□□□□□ -1.03
CTNND1-229ENST00000531014 GLI2P10070 1586 aa8.63□□□□□ -1.03
CTNND1-229ENST00000531014 TNNT1P13805 278 aa8.63□□□□□ -1.03
CTNND1-229ENST00000531014 GBP2P32456 591 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-229ENST00000531014 SMC4Q9NTJ3 1288 aa8.63□□□□□ -1.03
CTNND1-229ENST00000531014 ANKRD50Q9ULJ7 1429 aa8.63□□□□□ -1.03
CTNND1-229ENST00000531014 ABCA8O94911 1581 aa8.63□□□□□ -1.03
CTNND1-229ENST00000531014 SPATA31A6Q5VVP1 1343 aa8.63□□□□□ -1.03
CTNND1-229ENST00000531014 FRAT2O75474 233 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-229ENST00000531014 WDHD1O75717 1129 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-229ENST00000531014 LETM1O95202 739 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-229ENST00000531014 IBSPP21815 317 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-229ENST00000531014 LRRFIP1Q32MZ4 808 aaKnown RBP8.63□□□□□ -1.03
CTNND1-229ENST00000531014 C1orf141Q5JVX7 400 aa8.63□□□□□ -1.03
CTNND1-229ENST00000531014 CGNL1Q0VF96 1302 aa8.63□□□□□ -1.03
CTNND1-229ENST00000531014 SMG6Q86US8 1419 aaKnown RBP8.63□□□□□ -1.03
CTNND1-229ENST00000531014 SETSIPP0DME0 302 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 MAP2K1Q02750 393 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-229ENST00000531014 FILIP1LQ4L180 1135 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 QTRT2Q9H974 415 aaKnown RBP8.62□□□□□ -1.03
CTNND1-229ENST00000531014 NPATQ14207 1427 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-229ENST00000531014 RBM6P78332 1123 aaKnown RBP8.62□□□□□ -1.03
CTNND1-229ENST00000531014 CCDC181Q5TID7 509 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 TXLNBQ8N3L3 684 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 FBXW7Q969H0 707 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 LUC7LQ9NQ29 371 aaKnown RBP8.62□□□□□ -1.03
CTNND1-229ENST00000531014 NLRP2Q9NX02 1062 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 KDM4FA0A1W2PPD8 638 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 REC8O95072 547 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 KCNH5Q8NCM2 988 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 CCDC102AQ96A19 550 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 COG3Q96JB2 828 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-229ENST00000531014 IQCEQ6IPM2 695 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 DAAM2Q86T65 1068 aa8.62□□□□□ -1.03
CTNND1-229ENST00000531014 TXLNAP40222 546 aa8.61□□□□□ -1.03
CTNND1-229ENST00000531014 RUFY2Q8WXA3 655 aa8.61□□□□□ -1.03
CTNND1-229ENST00000531014 CFAP45Q9UL16 551 aa8.61□□□□□ -1.03
CTNND1-229ENST00000531014 JCADQ9P266 1359 aa8.61□□□□□ -1.03
CTNND1-229ENST00000531014 TMCO5BA8MYB1 307 aa8.61□□□□□ -1.03
CTNND1-229ENST00000531014 IRX3P78415 501 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-229ENST00000531014 MICALCLQ6ZW33 695 aa8.61□□□□□ -1.03
CTNND1-229ENST00000531014 FAM114A1Q8IWE2 563 aa8.61□□□□□ -1.03
CTNND1-229ENST00000531014 TBX22Q9Y458 520 aa8.61□□□□□ -1.03
CTNND1-229ENST00000531014 NLRP1Q9C000 1473 aa8.61□□□□□ -1.03
CTNND1-229ENST00000531014 CENPQQ7L2Z9 268 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-229ENST00000531014 CTDP1Q9Y5B0 961 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-229ENST00000531014 SAFBQ15424 915 aaKnown RBP eCLIP8.61□□□□□ -1.03
CTNND1-229ENST00000531014 RILPL2Q969X0 211 aa8.61□□□□□ -1.03
CTNND1-229ENST00000531014 UQCRHLA0A096LP55 91 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 VPS37CA5D8V6 355 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-229ENST00000531014 UQCRHP07919 91 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 SYCP1Q15431 976 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 ABTB2Q8N961 1025 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 DDX23Q9BUQ8 820 aaKnown RBP8.6□□□□□ -1.03
CTNND1-229ENST00000531014 ZNHIT6Q9NWK9 470 aaKnown RBP8.6□□□□□ -1.03
CTNND1-229ENST00000531014 LRRC9Q6ZRR7 1453 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 PIP4K2AP48426 406 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-229ENST00000531014 SMC3Q9UQE7 1217 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 ARAP3Q8WWN8 1544 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 ANKRD30BQ9BXX2 1392 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 SMC2O95347 1197 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 FAM193AP78312 1265 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-229ENST00000531014 TMCO3Q6UWJ1 677 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 WDR66Q8TBY9 1149 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 SDF4Q9BRK5 362 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 AMOTL1Q8IY63 956 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 GBP3Q9H0R5 595 aa8.6□□□□□ -1.03
CTNND1-229ENST00000531014 CGNQ9P2M7 1197 aaKnown RBP8.6□□□□□ -1.03
CTNND1-229ENST00000531014 SOCS7O14512 581 aa8.59□□□□□ -1.03
CTNND1-229ENST00000531014 BMS1Q14692 1282 aaKnown RBP8.59□□□□□ -1.03
CTNND1-229ENST00000531014 FEZ1Q99689 392 aa8.59□□□□□ -1.03
CTNND1-229ENST00000531014 PAIP2Q9BPZ3 127 aaKnown RBP8.59□□□□□ -1.03
CTNND1-229ENST00000531014 PHF8Q9UPP1 1060 aa8.59□□□□□ -1.03
CTNND1-229ENST00000531014 ATAD2Q6PL18 1390 aa8.59□□□□□ -1.03
CTNND1-229ENST00000531014 RNF214Q8ND24 703 aa8.59□□□□□ -1.03
CTNND1-229ENST00000531014 ZNF692Q9BU19 519 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-229ENST00000531014 PTPRTO14522 1441 aa8.59□□□□□ -1.03
CTNND1-229ENST00000531014 GTF2A1P52655 376 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-229ENST00000531014 KRT28Q7Z3Y7 464 aa8.59□□□□□ -1.03
CTNND1-229ENST00000531014 KTN1Q86UP2 1357 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms